Protein–RNA interactions for Protein: P0CG63

UBI4, Polyubiquitin, yeastyeast

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBI4P0CG63 MXR1YER042W 555 nt0.54□□□□□ -2.32
UBI4P0CG63 SWI5YDR146C 2130 nt0.53□□□□□ -2.32
UBI4P0CG63 GPM2YDL021W 936 nt0.53□□□□□ -2.32
UBI4P0CG63 YOL106WYOL106W 354 nt0.53□□□□□ -2.32
UBI4P0CG63 YOP1YPR028W 543 nt0.53□□□□□ -2.32
UBI4P0CG63 VPS52YDR484W 1926 nt0.53□□□□□ -2.32
UBI4P0CG63 RRI2YOL117W 1938 nt0.53□□□□□ -2.32
UBI4P0CG63 SET3YKR029C 2256 nt0.53□□□□□ -2.33
UBI4P0CG63 SRP14YDL092W 441 nt0.52□□□□□ -2.33
UBI4P0CG63 CUP1-1YHR053C 186 nt0.52□□□□□ -2.33
UBI4P0CG63 CUP1-2YHR055C 186 nt0.52□□□□□ -2.33
UBI4P0CG63 YLR366WYLR366W 306 nt0.52□□□□□ -2.33
UBI4P0CG63 YOR199WYOR199W 330 nt0.52□□□□□ -2.33
UBI4P0CG63 PIG1YLR273C 1947 nt0.52□□□□□ -2.33
UBI4P0CG63 snR79snR79 84 nt0.51□□□□□ -2.33
UBI4P0CG63 YDR003W-AYDR003W-A 123 nt0.51□□□□□ -2.33
UBI4P0CG63 SNO3YFL060C 669 nt0.51□□□□□ -2.33
UBI4P0CG63 YHR028W-AYHR028W-A 321 nt0.51□□□□□ -2.33
UBI4P0CG63 YBL068W-AYBL068W-A 237 nt0.51□□□□□ -2.33
UBI4P0CG63 FIG4YNL325C 2640 nt0.51□□□□□ -2.33
UBI4P0CG63 SNO2YNL334C 669 nt0.51□□□□□ -2.33
UBI4P0CG63 YDL196WYDL196W 330 nt0.5□□□□□ -2.33
UBI4P0CG63 tT(AGU)BtT(AGU)B 73 nt0.5□□□□□ -2.33
UBI4P0CG63 tT(AGU)CtT(AGU)C 73 nt0.5□□□□□ -2.33
UBI4P0CG63 tT(AGU)DtT(AGU)D 73 nt0.5□□□□□ -2.33
UBI4P0CG63 tT(AGU)HtT(AGU)H 73 nt0.5□□□□□ -2.33
UBI4P0CG63 tT(AGU)I1tT(AGU)I1 73 nt0.5□□□□□ -2.33
UBI4P0CG63 tT(AGU)I2tT(AGU)I2 73 nt0.5□□□□□ -2.33
UBI4P0CG63 tT(AGU)JtT(AGU)J 73 nt0.5□□□□□ -2.33
UBI4P0CG63 tT(AGU)N1tT(AGU)N1 73 nt0.5□□□□□ -2.33
UBI4P0CG63 tT(AGU)N2tT(AGU)N2 73 nt0.5□□□□□ -2.33
UBI4P0CG63 tT(AGU)O1tT(AGU)O1 73 nt0.5□□□□□ -2.33
UBI4P0CG63 tT(AGU)O2tT(AGU)O2 73 nt0.5□□□□□ -2.33
UBI4P0CG63 BMT5YIL096C 1011 nt0.5□□□□□ -2.33
UBI4P0CG63 YPR147CYPR147C 915 nt0.5□□□□□ -2.33
UBI4P0CG63 STO1YMR125W 2586 nt0.5□□□□□ -2.33
UBI4P0CG63 UTP10YJL109C 5310 nt0.49□□□□□ -2.33
UBI4P0CG63 YML002WYML002W 2214 nt0.49□□□□□ -2.33
UBI4P0CG63 YDL152WYDL152W 366 nt0.49□□□□□ -2.33
UBI4P0CG63 SWF1YDR126W 1011 nt0.49□□□□□ -2.33
UBI4P0CG63 tT(UGU)Q1tT(UGU)Q1 76 nt0.49□□□□□ -2.33
UBI4P0CG63 YJR140W-AYJR140W-A 150 nt0.49□□□□□ -2.33
UBI4P0CG63 YNL150WYNL150W 408 nt0.49□□□□□ -2.33
UBI4P0CG63 SCW11YGL028C 1629 nt0.49□□□□□ -2.33
UBI4P0CG63 YLL007CYLL007C 1998 nt0.48□□□□□ -2.33
UBI4P0CG63 YDR509WYDR509W 348 nt0.48□□□□□ -2.33
UBI4P0CG63 LIN1YHR156C 1023 nt0.48□□□□□ -2.33
UBI4P0CG63 COX7YMR256C 183 nt0.48□□□□□ -2.33
UBI4P0CG63 YMR304C-AYMR304C-A 351 nt0.48□□□□□ -2.33
UBI4P0CG63 RUF22RUF22 515 nt0.48□□□□□ -2.33
UBI4P0CG63 SLM6YBR266C 453 nt0.48□□□□□ -2.33
UBI4P0CG63 PDE2YOR360C 1581 nt0.48□□□□□ -2.33
UBI4P0CG63 AI5_ALPHAQ0070 1893 nt0.48□□□□□ -2.33
UBI4P0CG63 RPL38YLR325C 237 nt0.47□□□□□ -2.33
UBI4P0CG63 IES4YOR189W 351 nt0.47□□□□□ -2.33
UBI4P0CG63 SWI6YLR182W 2412 nt0.46□□□□□ -2.34
UBI4P0CG63 HNT1YDL125C 477 nt0.46□□□□□ -2.34
UBI4P0CG63 YEL057CYEL057C 702 nt0.46□□□□□ -2.34
UBI4P0CG63 ALG13YGL047W 609 nt0.46□□□□□ -2.34
UBI4P0CG63 RTT102YGR275W 474 nt0.46□□□□□ -2.34
UBI4P0CG63 CMC1YKL137W 336 nt0.46□□□□□ -2.34
UBI4P0CG63 YBR032WYBR032W 303 nt0.46□□□□□ -2.34
UBI4P0CG63 YDL073WYDL073W 2955 nt0.45□□□□□ -2.34
UBI4P0CG63 YER158W-AYER158W-A 216 nt0.45□□□□□ -2.34
UBI4P0CG63 YKL111CYKL111C 336 nt0.45□□□□□ -2.34
UBI4P0CG63 YMR175W-AYMR175W-A 195 nt0.45□□□□□ -2.34
UBI4P0CG63 MKT1YNL085W 2493 nt0.45□□□□□ -2.34
UBI4P0CG63 MMS4YBR098W 2076 nt0.44□□□□□ -2.34
UBI4P0CG63 RKR1YMR247C 4689 nt0.44□□□□□ -2.34
UBI4P0CG63 ECM12YHR021W-A 456 nt0.44□□□□□ -2.34
UBI4P0CG63 YPL197CYPL197C 414 nt0.44□□□□□ -2.34
UBI4P0CG63 snR83snR83 306 nt0.43□□□□□ -2.34
UBI4P0CG63 OCA6YDR067C 675 nt0.43□□□□□ -2.34
UBI4P0CG63 YDR114CYDR114C 303 nt0.43□□□□□ -2.34
UBI4P0CG63 YHR054CYHR054C 1065 nt0.43□□□□□ -2.34
UBI4P0CG63 YHR063W-AYHR063W-A 336 nt0.43□□□□□ -2.34
UBI4P0CG63 SDH2YLL041C 801 nt0.43□□□□□ -2.34
UBI4P0CG63 YLR217WYLR217W 324 nt0.43□□□□□ -2.34
UBI4P0CG63 DBP6YNR038W 1890 nt0.42□□□□□ -2.34
UBI4P0CG63 TIM10YHR005C-A 282 nt0.42□□□□□ -2.34
UBI4P0CG63 TMA22YJR014W 597 nt0.42□□□□□ -2.34
UBI4P0CG63 BI4Q0120 1917 nt0.41□□□□□ -2.34
UBI4P0CG63 LRP1YHR081W 555 nt0.41□□□□□ -2.34
UBI4P0CG63 YBL062WYBL062W 381 nt0.41□□□□□ -2.34
UBI4P0CG63 PAN3YKL025C 2040 nt0.41□□□□□ -2.34
UBI4P0CG63 SHE9YDR393W 1371 nt0.41□□□□□ -2.34
UBI4P0CG63 UBP3YER151C 2739 nt0.41□□□□□ -2.34
UBI4P0CG63 KAR1YNL188W 1302 nt0.4□□□□□ -2.34
UBI4P0CG63 SLY1YDR189W 2001 nt0.4□□□□□ -2.34
UBI4P0CG63 QCR7YDR529C 384 nt0.4□□□□□ -2.35
UBI4P0CG63 YEL018C-AYEL018C-A 534 nt0.4□□□□□ -2.35
UBI4P0CG63 YIL142C-AYIL142C-A 333 nt0.4□□□□□ -2.35
UBI4P0CG63 PAM16YJL104W 450 nt0.4□□□□□ -2.35
UBI4P0CG63 YBR071WYBR071W 636 nt0.4□□□□□ -2.35
UBI4P0CG63 YPR099CYPR099C 357 nt0.4□□□□□ -2.35
UBI4P0CG63 WAR1YML076C 2835 nt0.4□□□□□ -2.35
UBI4P0CG63 LCD1YDR499W 2244 nt0.4□□□□□ -2.35
UBI4P0CG63 ALY2YJL084C 3141 nt0.39□□□□□ -2.35
UBI4P0CG63 SLD3YGL113W 2007 nt0.39□□□□□ -2.35
UBI4P0CG63 RSM27YGR215W 333 nt0.39□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 80.4 ms