Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 RPH1YER169W 2391 nt2.09□□□□□ -2.08
TY2A-LR1P0C2J4 NAM7YMR080C 2916 nt2.09□□□□□ -2.08
TY2A-LR1P0C2J4 UFD4YKL010C 4452 nt2.09□□□□□ -2.08
TY2A-LR1P0C2J4 GCN4YEL009C 846 nt2.08□□□□□ -2.08
TY2A-LR1P0C2J4 HHT1YBR010W 411 nt2.08□□□□□ -2.08
TY2A-LR1P0C2J4 YFR016CYFR016C 3702 nt2.07□□□□□ -2.08
TY2A-LR1P0C2J4 YIL059CYIL059C 366 nt2.07□□□□□ -2.08
TY2A-LR1P0C2J4 RPL40BYKR094C 387 nt2.07□□□□□ -2.08
TY2A-LR1P0C2J4 VPS34YLR240W 2628 nt2.07□□□□□ -2.08
TY2A-LR1P0C2J4 SAP185YJL098W 3177 nt2.07□□□□□ -2.08
TY2A-LR1P0C2J4 UBP1YDL122W 2430 nt2.07□□□□□ -2.08
TY2A-LR1P0C2J4 DNF1YER166W 4716 nt2.06□□□□□ -2.08
TY2A-LR1P0C2J4 PRE4YFR050C 801 nt2.06□□□□□ -2.08
TY2A-LR1P0C2J4 BRP1YGL007W 378 nt2.06□□□□□ -2.08
TY2A-LR1P0C2J4 TMA10YLR327C 261 nt2.06□□□□□ -2.08
TY2A-LR1P0C2J4 PLC1YPL268W 2610 nt2.06□□□□□ -2.08
TY2A-LR1P0C2J4 SIR4YDR227W 4077 nt2.05□□□□□ -2.08
TY2A-LR1P0C2J4 IRA2YOL081W 9240 nt2.05□□□□□ -2.08
TY2A-LR1P0C2J4 YJR011CYJR011C 786 nt2.05□□□□□ -2.08
TY2A-LR1P0C2J4 MRPL31YKL138C 396 nt2.05□□□□□ -2.08
TY2A-LR1P0C2J4 YLR146W-AYLR146W-A 189 nt2.05□□□□□ -2.08
TY2A-LR1P0C2J4 tW(UCA)QtW(UCA)Q 74 nt2.04□□□□□ -2.08
TY2A-LR1P0C2J4 IRC8YJL051W 2469 nt2.04□□□□□ -2.08
TY2A-LR1P0C2J4 TFC8YPL007C 1767 nt2.04□□□□□ -2.08
TY2A-LR1P0C2J4 ARP7YPR034W 1434 nt2.04□□□□□ -2.08
TY2A-LR1P0C2J4 CHC1YGL206C 4962 nt2.04□□□□□ -2.08
TY2A-LR1P0C2J4 BRE1YDL074C 2103 nt2.03□□□□□ -2.08
TY2A-LR1P0C2J4 YCR087C-AYCR087C-A 462 nt2.03□□□□□ -2.08
TY2A-LR1P0C2J4 YKL136WYKL136W 399 nt2.03□□□□□ -2.08
TY2A-LR1P0C2J4 YOR072W-AYOR072W-A 249 nt2.03□□□□□ -2.08
TY2A-LR1P0C2J4 FMP23YBR047W 528 nt2.03□□□□□ -2.08
TY2A-LR1P0C2J4 YPL225WYPL225W 441 nt2.03□□□□□ -2.08
TY2A-LR1P0C2J4 CAT2YML042W 2013 nt2.03□□□□□ -2.08
TY2A-LR1P0C2J4 HER1YOR227W 3741 nt2.02□□□□□ -2.09
TY2A-LR1P0C2J4 SWI5YDR146C 2130 nt2.02□□□□□ -2.09
TY2A-LR1P0C2J4 BNI1YNL271C 5862 nt2.02□□□□□ -2.09
TY2A-LR1P0C2J4 ATP7YKL016C 525 nt2.02□□□□□ -2.09
TY2A-LR1P0C2J4 SGO1YOR073W 1773 nt2.02□□□□□ -2.09
TY2A-LR1P0C2J4 SSQ1YLR369W 1974 nt2.01□□□□□ -2.09
TY2A-LR1P0C2J4 PAC1YOR269W 1485 nt2.01□□□□□ -2.09
TY2A-LR1P0C2J4 PUT3YKL015W 2940 nt2.01□□□□□ -2.09
TY2A-LR1P0C2J4 SWI6YLR182W 2412 nt2.01□□□□□ -2.09
TY2A-LR1P0C2J4 EFR3YMR212C 2349 nt2.01□□□□□ -2.09
TY2A-LR1P0C2J4 YAF9YNL107W 681 nt2.01□□□□□ -2.09
TY2A-LR1P0C2J4 TIM18YOR297C 579 nt2.01□□□□□ -2.09
TY2A-LR1P0C2J4 PXA2YKL188C 2562 nt2.01□□□□□ -2.09
TY2A-LR1P0C2J4 YBP1YBR216C 2025 nt2□□□□□ -2.09
TY2A-LR1P0C2J4 KOG1YHR186C 4674 nt2□□□□□ -2.09
TY2A-LR1P0C2J4 OSH6YKR003W 1347 nt2□□□□□ -2.09
TY2A-LR1P0C2J4 HDA3YPR179C 1968 nt2□□□□□ -2.09
TY2A-LR1P0C2J4 YER088C-AYER088C-A 324 nt2□□□□□ -2.09
TY2A-LR1P0C2J4 YHL041WYHL041W 450 nt2□□□□□ -2.09
TY2A-LR1P0C2J4 YHR180W-AYHR180W-A 183 nt2□□□□□ -2.09
TY2A-LR1P0C2J4 YKL118WYKL118W 312 nt2□□□□□ -2.09
TY2A-LR1P0C2J4 DGR1YNL130C-A 147 nt2□□□□□ -2.09
TY2A-LR1P0C2J4 TOF1YNL273W 3717 nt2□□□□□ -2.09
TY2A-LR1P0C2J4 BUD2YKL092C 3315 nt1.99□□□□□ -2.09
TY2A-LR1P0C2J4 RPL27BYDR471W 411 nt1.99□□□□□ -2.09
TY2A-LR1P0C2J4 YKL165C-AYKL165C-A 234 nt1.99□□□□□ -2.09
TY2A-LR1P0C2J4 PAU18YLL064C 363 nt1.99□□□□□ -2.09
TY2A-LR1P0C2J4 PAU6YNR076W 363 nt1.99□□□□□ -2.09
TY2A-LR1P0C2J4 YSY6YBR162W-A 198 nt1.99□□□□□ -2.09
TY2A-LR1P0C2J4 NOP53YPL146C 1368 nt1.98□□□□□ -2.09
TY2A-LR1P0C2J4 RKM1YPL208W 1752 nt1.98□□□□□ -2.09
TY2A-LR1P0C2J4 YDR102CYDR102C 333 nt1.98□□□□□ -2.09
TY2A-LR1P0C2J4 EMP24YGL200C 612 nt1.98□□□□□ -2.09
TY2A-LR1P0C2J4 ABM1YJR108W 372 nt1.98□□□□□ -2.09
TY2A-LR1P0C2J4 MCM22YJR135C 720 nt1.97□□□□□ -2.09
TY2A-LR1P0C2J4 YNL146WYNL146W 303 nt1.97□□□□□ -2.09
TY2A-LR1P0C2J4 NUT2YPR168W 474 nt1.97□□□□□ -2.09
TY2A-LR1P0C2J4 FKS1YLR342W 5631 nt1.97□□□□□ -2.09
TY2A-LR1P0C2J4 HCS1YKL017C 2052 nt1.97□□□□□ -2.09
TY2A-LR1P0C2J4 MCD1YDL003W 1701 nt1.97□□□□□ -2.09
TY2A-LR1P0C2J4 USO1YDL058W 5373 nt1.96□□□□□ -2.1
TY2A-LR1P0C2J4 YOR343W-BYOR343W-B 5313 nt1.96□□□□□ -2.1
TY2A-LR1P0C2J4 YGR265WYGR265W 411 nt1.96□□□□□ -2.1
TY2A-LR1P0C2J4 MF(ALPHA)1YPL187W 498 nt1.96□□□□□ -2.1
TY2A-LR1P0C2J4 SAR1YPL218W 573 nt1.96□□□□□ -2.1
TY2A-LR1P0C2J4 YCL046WYCL046W 324 nt1.96□□□□□ -2.1
TY2A-LR1P0C2J4 ATG9YDL149W 2994 nt1.95□□□□□ -2.1
TY2A-LR1P0C2J4 GYP5YPL249C 2685 nt1.95□□□□□ -2.1
TY2A-LR1P0C2J4 CYC7YEL039C 342 nt1.95□□□□□ -2.1
TY2A-LR1P0C2J4 YHR073W-AYHR073W-A 177 nt1.95□□□□□ -2.1
TY2A-LR1P0C2J4 ZRG17YNR039C 1818 nt1.95□□□□□ -2.1
TY2A-LR1P0C2J4 MAK10YEL053C 2202 nt1.95□□□□□ -2.1
TY2A-LR1P0C2J4 COS111YBR203W 2775 nt1.95□□□□□ -2.1
TY2A-LR1P0C2J4 YGR250CYGR250C 2346 nt1.95□□□□□ -2.1
TY2A-LR1P0C2J4 CTR9YOL145C 3234 nt1.95□□□□□ -2.1
TY2A-LR1P0C2J4 IRE1YHR079C 3348 nt1.94□□□□□ -2.1
TY2A-LR1P0C2J4 YDL118WYDL118W 381 nt1.94□□□□□ -2.1
TY2A-LR1P0C2J4 YER172C-AYER172C-A 381 nt1.94□□□□□ -2.1
TY2A-LR1P0C2J4 YHR007C-AYHR007C-A 216 nt1.94□□□□□ -2.1
TY2A-LR1P0C2J4 DCP2YNL118C 2913 nt1.94□□□□□ -2.1
TY2A-LR1P0C2J4 PDR8YLR266C 2106 nt1.94□□□□□ -2.1
TY2A-LR1P0C2J4 RFX1YLR176C 2436 nt1.93□□□□□ -2.1
TY2A-LR1P0C2J4 RGA1YOR127W 3024 nt1.93□□□□□ -2.1
TY2A-LR1P0C2J4 SLY1YDR189W 2001 nt1.93□□□□□ -2.1
TY2A-LR1P0C2J4 CSN9YDR179C 489 nt1.93□□□□□ -2.1
TY2A-LR1P0C2J4 UPS1YLR193C 528 nt1.93□□□□□ -2.1
TY2A-LR1P0C2J4 UBP2YOR124C 3819 nt1.93□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 170.5 ms