Protein–RNA interactions for Protein: Q99231

TY1B-DR3, Transposon Ty1-DR3 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR3Q99231 VPS25YJR102C 609 nt0.11□□□□□ -2.39
TY1B-DR3Q99231 HDA3YPR179C 1968 nt0.11□□□□□ -2.39
TY1B-DR3Q99231 UTP10YJL109C 5310 nt0.1□□□□□ -2.39
TY1B-DR3Q99231 SGD1YLR336C 2700 nt0.1□□□□□ -2.39
TY1B-DR3Q99231 TSA2YDR453C 591 nt0.1□□□□□ -2.39
TY1B-DR3Q99231 RPL9BYNL067W 576 nt0.1□□□□□ -2.39
TY1B-DR3Q99231 MVB12YGR206W 306 nt0.09□□□□□ -2.39
TY1B-DR3Q99231 YHR212CYHR212C 336 nt0.09□□□□□ -2.39
TY1B-DR3Q99231 YAR060CYAR060C 336 nt0.09□□□□□ -2.39
TY1B-DR3Q99231 YOL013W-AYOL013W-A 192 nt0.09□□□□□ -2.39
TY1B-DR3Q99231 GLG1YKR058W 1851 nt0.08□□□□□ -2.4
TY1B-DR3Q99231 YHL012WYHL012W 1482 nt0.08□□□□□ -2.4
TY1B-DR3Q99231 RSM27YGR215W 333 nt0.08□□□□□ -2.4
TY1B-DR3Q99231 HSK3YKL138C-A 210 nt0.08□□□□□ -2.4
TY1B-DR3Q99231 SEC5YDR166C 2916 nt0.08□□□□□ -2.4
TY1B-DR3Q99231 NNF2YGR089W 2811 nt0.08□□□□□ -2.4
TY1B-DR3Q99231 YCR090CYCR090C 549 nt0.07□□□□□ -2.4
TY1B-DR3Q99231 PGA1YNL158W 597 nt0.07□□□□□ -2.4
TY1B-DR3Q99231 TOF2YKR010C 2316 nt0.07□□□□□ -2.4
TY1B-DR3Q99231 TAP42YMR028W 1101 nt0.06□□□□□ -2.4
TY1B-DR3Q99231 YMR324CYMR324C 243 nt0.06□□□□□ -2.4
TY1B-DR3Q99231 TEX1YNL253W 1269 nt0.06□□□□□ -2.4
TY1B-DR3Q99231 DUO1YGL061C 744 nt0.06□□□□□ -2.4
TY1B-DR3Q99231 BMT5YIL096C 1011 nt0.06□□□□□ -2.4
TY1B-DR3Q99231 SST2YLR452C 2097 nt0.06□□□□□ -2.4
TY1B-DR3Q99231 SLS1YLR139C 1932 nt0.06□□□□□ -2.4
TY1B-DR3Q99231 OSH6YKR003W 1347 nt0.06□□□□□ -2.4
TY1B-DR3Q99231 SWF1YDR126W 1011 nt0.05□□□□□ -2.4
TY1B-DR3Q99231 TMA20YER007C-A 546 nt0.05□□□□□ -2.4
TY1B-DR3Q99231 YFL012W-AYFL012W-A 375 nt0.05□□□□□ -2.4
TY1B-DR3Q99231 YBR012CYBR012C 420 nt0.05□□□□□ -2.4
TY1B-DR3Q99231 YOR282WYOR282W 321 nt0.05□□□□□ -2.4
TY1B-DR3Q99231 TRS20YBR254C 528 nt0.05□□□□□ -2.4
TY1B-DR3Q99231 NDD1YOR372C 1665 nt0.05□□□□□ -2.4
TY1B-DR3Q99231 AFR1YDR085C 1863 nt0.05□□□□□ -2.4
TY1B-DR3Q99231 COG7YGL005C 840 nt0.04□□□□□ -2.4
TY1B-DR3Q99231 YGL006W-AYGL006W-A 111 nt0.04□□□□□ -2.4
TY1B-DR3Q99231 COX6YHR051W 447 nt0.04□□□□□ -2.4
TY1B-DR3Q99231 IZH4YOL101C 939 nt0.04□□□□□ -2.4
TY1B-DR3Q99231 LOA1YPR139C 903 nt0.04□□□□□ -2.4
TY1B-DR3Q99231 YDL206WYDL206W 2289 nt0.04□□□□□ -2.4
TY1B-DR3Q99231 YPD1YDL235C 504 nt0.04□□□□□ -2.4
TY1B-DR3Q99231 CYC7YEL039C 342 nt0.04□□□□□ -2.4
TY1B-DR3Q99231 SDL1YIL167W 633 nt0.04□□□□□ -2.4
TY1B-DR3Q99231 YLR042CYLR042C 486 nt0.04□□□□□ -2.4
TY1B-DR3Q99231 YOL050CYOL050C 321 nt0.04□□□□□ -2.4
TY1B-DR3Q99231 YOR394C-AYOR394C-A 168 nt0.04□□□□□ -2.4
TY1B-DR3Q99231 NUT2YPR168W 474 nt0.04□□□□□ -2.4
TY1B-DR3Q99231 MUD2YKL074C 1584 nt0.03□□□□□ -2.4
TY1B-DR3Q99231 RCN1YKL159C 636 nt0.03□□□□□ -2.4
TY1B-DR3Q99231 VIK1YPL253C 1944 nt0.02□□□□□ -2.41
TY1B-DR3Q99231 YCR043CYCR043C 384 nt0.02□□□□□ -2.41
TY1B-DR3Q99231 YDR003W-AYDR003W-A 123 nt0.01□□□□□ -2.41
TY1B-DR3Q99231 YDR509WYDR509W 348 nt0.01□□□□□ -2.41
TY1B-DR3Q99231 YLR225CYLR225C 1224 nt0.01□□□□□ -2.41
TY1B-DR3Q99231 RPC25YKL144C 639 nt0.01□□□□□ -2.41
TY1B-DR3Q99231 PIG1YLR273C 1947 nt0□□□□□ -2.41
TY1B-DR3Q99231 SLI15YBR156C 2097 nt0□□□□□ -2.41
TY1B-DR3Q99231 NUR1YDL089W 1455 nt0□□□□□ -2.41
TY1B-DR3Q99231 YML047W-AYML047W-A 366 nt0□□□□□ -2.41
TY1B-DR3Q99231 YPL034WYPL034W 498 nt0□□□□□ -2.41
TY1B-DR3Q99231 MPT5YGL178W 2580 nt-0.01□□□□□ -2.41
TY1B-DR3Q99231 RPL35BYDL136W 363 nt-0.01□□□□□ -2.41
TY1B-DR3Q99231 YHR063W-AYHR063W-A 336 nt-0.01□□□□□ -2.41
TY1B-DR3Q99231 NBP1YLR457C 960 nt-0.01□□□□□ -2.41
TY1B-DR3Q99231 CGI121YML036W 546 nt-0.01□□□□□ -2.41
TY1B-DR3Q99231 RPL32YBL092W 393 nt-0.01□□□□□ -2.41
TY1B-DR3Q99231 YOL085W-AYOL085W-A 213 nt-0.01□□□□□ -2.41
TY1B-DR3Q99231 MKT1YNL085W 2493 nt-0.02□□□□□ -2.41
TY1B-DR3Q99231 YBL100W-BYBL100W-B 5313 nt-0.02□□□□□ -2.41
TY1B-DR3Q99231 GIC2YDR309C 1152 nt-0.02□□□□□ -2.41
TY1B-DR3Q99231 GRX8YLR364W 330 nt-0.02□□□□□ -2.41
TY1B-DR3Q99231 POP8YBL018C 402 nt-0.02□□□□□ -2.41
TY1B-DR3Q99231 SLM6YBR266C 453 nt-0.02□□□□□ -2.41
TY1B-DR3Q99231 YJR071WYJR071W 369 nt-0.03□□□□□ -2.41
TY1B-DR3Q99231 ATX1YNL259C 222 nt-0.03□□□□□ -2.41
TY1B-DR3Q99231 GPX2YBR244W 489 nt-0.04□□□□□ -2.42
TY1B-DR3Q99231 YJL049WYJL049W 1353 nt-0.04□□□□□ -2.42
TY1B-DR3Q99231 VPS74YDR372C 1038 nt-0.04□□□□□ -2.42
TY1B-DR3Q99231 YEL030C-AYEL030C-A 315 nt-0.04□□□□□ -2.42
TY1B-DR3Q99231 ALG13YGL047W 609 nt-0.04□□□□□ -2.42
TY1B-DR3Q99231 RPL37AYLR185W 267 nt-0.04□□□□□ -2.42
TY1B-DR3Q99231 AIM41YOR215C 558 nt-0.04□□□□□ -2.42
TY1B-DR3Q99231 PXA2YKL188C 2562 nt-0.05□□□□□ -2.42
TY1B-DR3Q99231 DBP6YNR038W 1890 nt-0.05□□□□□ -2.42
TY1B-DR3Q99231 RPL35AYDL191W 363 nt-0.05□□□□□ -2.42
TY1B-DR3Q99231 IMP3YHR148W 552 nt-0.05□□□□□ -2.42
TY1B-DR3Q99231 YOL150CYOL150C 312 nt-0.05□□□□□ -2.42
TY1B-DR3Q99231 HAL9YOL089C 3093 nt-0.06□□□□□ -2.42
TY1B-DR3Q99231 YGR219WYGR219W 342 nt-0.06□□□□□ -2.42
TY1B-DR3Q99231 HYM1YKL189W 1200 nt-0.06□□□□□ -2.42
TY1B-DR3Q99231 YAL069WYAL069W 315 nt-0.06□□□□□ -2.42
TY1B-DR3Q99231 snR190snR190 190 nt-0.06□□□□□ -2.42
TY1B-DR3Q99231 VPS52YDR484W 1926 nt-0.06□□□□□ -2.42
TY1B-DR3Q99231 YOR192C-AYOR192C-A 1317 nt-0.06□□□□□ -2.42
TY1B-DR3Q99231 ISD11YER048W-A 285 nt-0.06□□□□□ -2.42
TY1B-DR3Q99231 snR63snR63 255 nt-0.07□□□□□ -2.42
TY1B-DR3Q99231 YNR021WYNR021W 1215 nt-0.07□□□□□ -2.42
TY1B-DR3Q99231 RPB10YOR210W 213 nt-0.07□□□□□ -2.42
TY1B-DR3Q99231 YPR074W-AYPR074W-A 171 nt-0.07□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 31.5 ms