Protein–RNA interactions for Protein: Q08471

MSA1, G1-specific transcription factors activator MSA1, yeastyeast

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSA1Q08471 MAK10YEL053C 2202 nt1.18□□□□□ -2.22
MSA1Q08471 YDL041WYDL041W 354 nt1.18□□□□□ -2.22
MSA1Q08471 CRG1YHR209W 876 nt1.18□□□□□ -2.22
MSA1Q08471 YJL015CYJL015C 285 nt1.18□□□□□ -2.22
MSA1Q08471 YJR087WYJR087W 351 nt1.18□□□□□ -2.22
MSA1Q08471 AFB1YLR040C 675 nt1.18□□□□□ -2.22
MSA1Q08471 YLR252WYLR252W 306 nt1.18□□□□□ -2.22
MSA1Q08471 YLR271WYLR271W 825 nt1.18□□□□□ -2.22
MSA1Q08471 YBL073WYBL073W 312 nt1.18□□□□□ -2.22
MSA1Q08471 VPS52YDR484W 1926 nt1.18□□□□□ -2.22
MSA1Q08471 MSS11YMR164C 2277 nt1.17□□□□□ -2.22
MSA1Q08471 YDL187CYDL187C 330 nt1.17□□□□□ -2.22
MSA1Q08471 YER175W-AYER175W-A 165 nt1.17□□□□□ -2.22
MSA1Q08471 VMA21YGR105W 234 nt1.17□□□□□ -2.22
MSA1Q08471 YIR020CYIR020C 303 nt1.17□□□□□ -2.22
MSA1Q08471 YKL023C-AYKL023C-A 228 nt1.17□□□□□ -2.22
MSA1Q08471 MSH3YCR092C 3057 nt1.17□□□□□ -2.22
MSA1Q08471 snR79snR79 84 nt1.16□□□□□ -2.22
MSA1Q08471 SMB1YER029C 591 nt1.16□□□□□ -2.22
MSA1Q08471 IRC19YLL033W 693 nt1.16□□□□□ -2.22
MSA1Q08471 YNL319WYNL319W 441 nt1.16□□□□□ -2.22
MSA1Q08471 SEC21YNL287W 2808 nt1.16□□□□□ -2.22
MSA1Q08471 MAD1YGL086W 2250 nt1.15□□□□□ -2.22
MSA1Q08471 MLH3YPL164C 2148 nt1.15□□□□□ -2.23
MSA1Q08471 HNT1YDL125C 477 nt1.15□□□□□ -2.23
MSA1Q08471 YFR009W-AYFR009W-A 258 nt1.15□□□□□ -2.23
MSA1Q08471 COX7YMR256C 183 nt1.15□□□□□ -2.23
MSA1Q08471 YNL050CYNL050C 813 nt1.15□□□□□ -2.23
MSA1Q08471 GNT1YOR320C 1476 nt1.15□□□□□ -2.23
MSA1Q08471 APL2YKL135C 2181 nt1.15□□□□□ -2.23
MSA1Q08471 YGR109W-BYGR109W-B 4644 nt1.15□□□□□ -2.23
MSA1Q08471 SPC110YDR356W 2835 nt1.14□□□□□ -2.23
MSA1Q08471 YER121WYER121W 345 nt1.14□□□□□ -2.23
MSA1Q08471 YGR265WYGR265W 411 nt1.14□□□□□ -2.23
MSA1Q08471 YLR140WYLR140W 327 nt1.14□□□□□ -2.23
MSA1Q08471 HHT1YBR010W 411 nt1.14□□□□□ -2.23
MSA1Q08471 SEF1YBL066C 3447 nt1.14□□□□□ -2.23
MSA1Q08471 OSH6YKR003W 1347 nt1.14□□□□□ -2.23
MSA1Q08471 ABM1YJR108W 372 nt1.13□□□□□ -2.23
MSA1Q08471 YML003WYML003W 873 nt1.13□□□□□ -2.23
MSA1Q08471 YOR152CYOR152C 771 nt1.13□□□□□ -2.23
MSA1Q08471 EST2YLR318W 2655 nt1.12□□□□□ -2.23
MSA1Q08471 SEC5YDR166C 2916 nt1.12□□□□□ -2.23
MSA1Q08471 tH(GUG)E1tH(GUG)E1 72 nt1.12□□□□□ -2.23
MSA1Q08471 tH(GUG)E2tH(GUG)E2 72 nt1.12□□□□□ -2.23
MSA1Q08471 tH(GUG)G1tH(GUG)G1 72 nt1.12□□□□□ -2.23
MSA1Q08471 tH(GUG)G2tH(GUG)G2 72 nt1.12□□□□□ -2.23
MSA1Q08471 tH(GUG)HtH(GUG)H 72 nt1.12□□□□□ -2.23
MSA1Q08471 tH(GUG)KtH(GUG)K 72 nt1.12□□□□□ -2.23
MSA1Q08471 tH(GUG)MtH(GUG)M 72 nt1.12□□□□□ -2.23
MSA1Q08471 EMC5YIL027C 426 nt1.12□□□□□ -2.23
MSA1Q08471 YIL029CYIL029C 429 nt1.12□□□□□ -2.23
MSA1Q08471 COF1YLL050C 432 nt1.12□□□□□ -2.23
MSA1Q08471 POL5YEL055C 3069 nt1.12□□□□□ -2.23
MSA1Q08471 ALK1YGL021W 2283 nt1.12□□□□□ -2.23
MSA1Q08471 HKR1YDR420W 5409 nt1.11□□□□□ -2.23
MSA1Q08471 PAU2YEL049W 363 nt1.11□□□□□ -2.23
MSA1Q08471 PAU12YGR294W 363 nt1.11□□□□□ -2.23
MSA1Q08471 RPL42BYHR141C 321 nt1.11□□□□□ -2.23
MSA1Q08471 RPC10YHR143W-A 213 nt1.11□□□□□ -2.23
MSA1Q08471 YJL022WYJL022W 309 nt1.11□□□□□ -2.23
MSA1Q08471 RCN1YKL159C 636 nt1.11□□□□□ -2.23
MSA1Q08471 PAU18YLL064C 363 nt1.11□□□□□ -2.23
MSA1Q08471 RPL42AYNL162W 321 nt1.11□□□□□ -2.23
MSA1Q08471 PAU6YNR076W 363 nt1.11□□□□□ -2.23
MSA1Q08471 SLM6YBR266C 453 nt1.11□□□□□ -2.23
MSA1Q08471 PAU24YBR301W 363 nt1.11□□□□□ -2.23
MSA1Q08471 AZF1YOR113W 2745 nt1.11□□□□□ -2.23
MSA1Q08471 SPC98YNL126W 2541 nt1.11□□□□□ -2.23
MSA1Q08471 SWT1YOR166C 1377 nt1.1□□□□□ -2.23
MSA1Q08471 YNL284C-BYNL284C-B 5268 nt1.1□□□□□ -2.23
MSA1Q08471 AHC1YOR023C 1701 nt1.1□□□□□ -2.23
MSA1Q08471 GPM2YDL021W 936 nt1.1□□□□□ -2.23
MSA1Q08471 SWS2YNL081C 432 nt1.1□□□□□ -2.23
MSA1Q08471 YOR376WYOR376W 369 nt1.1□□□□□ -2.23
MSA1Q08471 TTI1YKL033W 3117 nt1.1□□□□□ -2.23
MSA1Q08471 YBR012W-AYBR012W-A 1323 nt1.1□□□□□ -2.23
MSA1Q08471 YOR142W-AYOR142W-A 1323 nt1.1□□□□□ -2.23
MSA1Q08471 YPR158W-AYPR158W-A 1323 nt1.1□□□□□ -2.23
MSA1Q08471 MVP1YMR004W 1536 nt1.1□□□□□ -2.23
MSA1Q08471 RSM22YKL155C 1887 nt1.09□□□□□ -2.23
MSA1Q08471 YER188C-AYER188C-A 300 nt1.09□□□□□ -2.23
MSA1Q08471 VPS55YJR044C 423 nt1.09□□□□□ -2.23
MSA1Q08471 YOR029WYOR029W 336 nt1.09□□□□□ -2.23
MSA1Q08471 MSN5YDR335W 3675 nt1.09□□□□□ -2.24
MSA1Q08471 IRR1YIL026C 3453 nt1.08□□□□□ -2.24
MSA1Q08471 YLL054CYLL054C 2532 nt1.08□□□□□ -2.24
MSA1Q08471 MTC7YEL033W 420 nt1.08□□□□□ -2.24
MSA1Q08471 UFD2YDL190C 2886 nt1.08□□□□□ -2.24
MSA1Q08471 NUP120YKL057C 3114 nt1.08□□□□□ -2.24
MSA1Q08471 MSH5YDL154W 2706 nt1.08□□□□□ -2.24
MSA1Q08471 PBY1YBR094W 2262 nt1.08□□□□□ -2.24
MSA1Q08471 YHR214C-CYHR214C-C 1437 nt1.07□□□□□ -2.24
MSA1Q08471 RVS161YCR009C 798 nt1.07□□□□□ -2.24
MSA1Q08471 FCF2YLR051C 654 nt1.07□□□□□ -2.24
MSA1Q08471 RPS18BYML026C 441 nt1.07□□□□□ -2.24
MSA1Q08471 MUK1YPL070W 1839 nt1.07□□□□□ -2.24
MSA1Q08471 SHE9YDR393W 1371 nt1.07□□□□□ -2.24
MSA1Q08471 DGR2YKL121W 2559 nt1.06□□□□□ -2.24
MSA1Q08471 LAA1YJL207C 6045 nt1.06□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 82 ms