Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 CHZ1YER030W 462 nt1.27□□□□□ -2.21
RRP40Q08285 tH(GUG)HtH(GUG)H 72 nt1.27□□□□□ -2.21
RRP40Q08285 tH(GUG)KtH(GUG)K 72 nt1.27□□□□□ -2.21
RRP40Q08285 tH(GUG)MtH(GUG)M 72 nt1.27□□□□□ -2.21
RRP40Q08285 YFR009W-AYFR009W-A 258 nt1.27□□□□□ -2.21
RRP40Q08285 tR(UCU)Q1tR(UCU)Q1 73 nt1.27□□□□□ -2.21
RRP40Q08285 NBP1YLR457C 960 nt1.27□□□□□ -2.21
RRP40Q08285 CTR9YOL145C 3234 nt1.27□□□□□ -2.21
RRP40Q08285 CDC25YLR310C 4770 nt1.27□□□□□ -2.21
RRP40Q08285 PBY1YBR094W 2262 nt1.27□□□□□ -2.21
RRP40Q08285 REF2YDR195W 1602 nt1.26□□□□□ -2.21
RRP40Q08285 RPC10YHR143W-A 213 nt1.26□□□□□ -2.21
RRP40Q08285 tT(UGU)Q1tT(UGU)Q1 76 nt1.26□□□□□ -2.21
RRP40Q08285 YLR140WYLR140W 327 nt1.26□□□□□ -2.21
RRP40Q08285 KAP122YGL016W 3246 nt1.25□□□□□ -2.21
RRP40Q08285 BST1YFL025C 3090 nt1.25□□□□□ -2.21
RRP40Q08285 CDC36YDL165W 576 nt1.25□□□□□ -2.21
RRP40Q08285 YDR220CYDR220C 294 nt1.25□□□□□ -2.21
RRP40Q08285 YFL012W-AYFL012W-A 375 nt1.25□□□□□ -2.21
RRP40Q08285 VMA21YGR105W 234 nt1.25□□□□□ -2.21
RRP40Q08285 SPO13YHR014W 876 nt1.25□□□□□ -2.21
RRP40Q08285 YJL022WYJL022W 309 nt1.25□□□□□ -2.21
RRP40Q08285 YLR252WYLR252W 306 nt1.25□□□□□ -2.21
RRP40Q08285 AHC1YOR023C 1701 nt1.25□□□□□ -2.21
RRP40Q08285 PHR1YOR386W 1698 nt1.25□□□□□ -2.21
RRP40Q08285 SMY1YKL079W 1971 nt1.25□□□□□ -2.21
RRP40Q08285 RLM1YPL089C 2031 nt1.24□□□□□ -2.21
RRP40Q08285 YFL012WYFL012W 447 nt1.24□□□□□ -2.21
RRP40Q08285 ABM1YJR108W 372 nt1.24□□□□□ -2.21
RRP40Q08285 YKL111CYKL111C 336 nt1.24□□□□□ -2.21
RRP40Q08285 YKL183C-AYKL183C-A 213 nt1.23□□□□□ -2.21
RRP40Q08285 DCP2YNL118C 2913 nt1.22□□□□□ -2.21
RRP40Q08285 RVS161YCR009C 798 nt1.22□□□□□ -2.21
RRP40Q08285 snR79snR79 84 nt1.22□□□□□ -2.21
RRP40Q08285 RCN1YKL159C 636 nt1.22□□□□□ -2.21
RRP40Q08285 SWS2YNL081C 432 nt1.22□□□□□ -2.21
RRP40Q08285 IRR1YIL026C 3453 nt1.22□□□□□ -2.21
RRP40Q08285 ALK1YGL021W 2283 nt1.22□□□□□ -2.21
RRP40Q08285 YJR029WYJR029W 5268 nt1.22□□□□□ -2.21
RRP40Q08285 YPR137C-BYPR137C-B 5268 nt1.22□□□□□ -2.21
RRP40Q08285 SMB1YER029C 591 nt1.21□□□□□ -2.22
RRP40Q08285 YER121WYER121W 345 nt1.21□□□□□ -2.22
RRP40Q08285 YIL029CYIL029C 429 nt1.21□□□□□ -2.22
RRP40Q08285 YKL023C-AYKL023C-A 228 nt1.21□□□□□ -2.22
RRP40Q08285 PKR1YMR123W 369 nt1.21□□□□□ -2.22
RRP40Q08285 COX7YMR256C 183 nt1.21□□□□□ -2.22
RRP40Q08285 YOR152CYOR152C 771 nt1.21□□□□□ -2.22
RRP40Q08285 FMP23YBR047W 528 nt1.21□□□□□ -2.22
RRP40Q08285 CDC24YAL041W 2565 nt1.21□□□□□ -2.22
RRP40Q08285 FRK1YPL141C 2598 nt1.21□□□□□ -2.22
RRP40Q08285 YBR184WYBR184W 1572 nt1.21□□□□□ -2.22
RRP40Q08285 SPC1YJR010C-A 285 nt1.2□□□□□ -2.22
RRP40Q08285 AFB1YLR040C 675 nt1.2□□□□□ -2.22
RRP40Q08285 YBL029C-AYBL029C-A 285 nt1.2□□□□□ -2.22
RRP40Q08285 EGD1YPL037C 474 nt1.2□□□□□ -2.22
RRP40Q08285 MSH5YDL154W 2706 nt1.19□□□□□ -2.22
RRP40Q08285 CIC1YHR052W 1131 nt1.19□□□□□ -2.22
RRP40Q08285 VPS55YJR044C 423 nt1.19□□□□□ -2.22
RRP40Q08285 YJR079WYJR079W 330 nt1.19□□□□□ -2.22
RRP40Q08285 RSM22YKL155C 1887 nt1.19□□□□□ -2.22
RRP40Q08285 NCA2YPR155C 1851 nt1.19□□□□□ -2.22
RRP40Q08285 SNF5YBR289W 2718 nt1.19□□□□□ -2.22
RRP40Q08285 TRM732YMR259C 4263 nt1.19□□□□□ -2.22
RRP40Q08285 SEF1YBL066C 3447 nt1.18□□□□□ -2.22
RRP40Q08285 YBR012W-AYBR012W-A 1323 nt1.18□□□□□ -2.22
RRP40Q08285 YOR142W-AYOR142W-A 1323 nt1.18□□□□□ -2.22
RRP40Q08285 YPR158W-AYPR158W-A 1323 nt1.18□□□□□ -2.22
RRP40Q08285 YER188C-AYER188C-A 300 nt1.18□□□□□ -2.22
RRP40Q08285 CRG1YHR209W 876 nt1.18□□□□□ -2.22
RRP40Q08285 COF1YLL050C 432 nt1.18□□□□□ -2.22
RRP40Q08285 YOL159CYOL159C 516 nt1.18□□□□□ -2.22
RRP40Q08285 YGR130CYGR130C 2451 nt1.17□□□□□ -2.22
RRP40Q08285 OSH6YKR003W 1347 nt1.17□□□□□ -2.22
RRP40Q08285 EST2YLR318W 2655 nt1.17□□□□□ -2.22
RRP40Q08285 YHR214C-CYHR214C-C 1437 nt1.17□□□□□ -2.22
RRP40Q08285 YIL020C-AYIL020C-A 339 nt1.17□□□□□ -2.22
RRP40Q08285 HHT1YBR010W 411 nt1.17□□□□□ -2.22
RRP40Q08285 RPL33BYOR234C 324 nt1.17□□□□□ -2.22
RRP40Q08285 DGR2YKL121W 2559 nt1.17□□□□□ -2.22
RRP40Q08285 SMC4YLR086W 4257 nt1.16□□□□□ -2.22
RRP40Q08285 YGR265WYGR265W 411 nt1.16□□□□□ -2.22
RRP40Q08285 RPL42BYHR141C 321 nt1.16□□□□□ -2.22
RRP40Q08285 YBL073WYBL073W 312 nt1.16□□□□□ -2.22
RRP40Q08285 RPL42AYNL162W 321 nt1.16□□□□□ -2.22
RRP40Q08285 SLM6YBR266C 453 nt1.16□□□□□ -2.22
RRP40Q08285 SPO75YLL005C 2607 nt1.16□□□□□ -2.22
RRP40Q08285 GMC2YLR445W 567 nt1.15□□□□□ -2.23
RRP40Q08285 RAD9YDR217C 3930 nt1.15□□□□□ -2.23
RRP40Q08285 HNT1YDL125C 477 nt1.14□□□□□ -2.23
RRP40Q08285 OCA6YDR067C 675 nt1.14□□□□□ -2.23
RRP40Q08285 MTC7YEL033W 420 nt1.14□□□□□ -2.23
RRP40Q08285 EMC5YIL027C 426 nt1.14□□□□□ -2.23
RRP40Q08285 YKL044WYKL044W 321 nt1.14□□□□□ -2.23
RRP40Q08285 YNL114CYNL114C 372 nt1.14□□□□□ -2.23
RRP40Q08285 YPR146CYPR146C 330 nt1.14□□□□□ -2.23
RRP40Q08285 YCL046WYCL046W 324 nt1.14□□□□□ -2.23
RRP40Q08285 MAK10YEL053C 2202 nt1.13□□□□□ -2.23
RRP40Q08285 MSN5YDR335W 3675 nt1.13□□□□□ -2.23
RRP40Q08285 YDL152WYDL152W 366 nt1.13□□□□□ -2.23
RRP40Q08285 YHR028W-AYHR028W-A 321 nt1.13□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 51.5 ms