Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 15S_rRNA15S_rRNA 1649 nt0.68□□□□□ -2.3
RFU1Q08003 SWI4YER111C 3282 nt0.68□□□□□ -2.3
RFU1Q08003 RTR1YER139C 681 nt0.68□□□□□ -2.3
RFU1Q08003 NUP145YGL092W 3954 nt0.68□□□□□ -2.3
RFU1Q08003 YGR270C-AYGR270C-A 219 nt0.68□□□□□ -2.3
RFU1Q08003 YIR020C-BYIR020C-B 735 nt0.68□□□□□ -2.3
RFU1Q08003 YDR248CYDR248C 582 nt0.67□□□□□ -2.3
RFU1Q08003 LSO2YGR169C-A 279 nt0.67□□□□□ -2.3
RFU1Q08003 YIR020CYIR020C 303 nt0.67□□□□□ -2.3
RFU1Q08003 TMA22YJR014W 597 nt0.67□□□□□ -2.3
RFU1Q08003 SEC22YLR268W 645 nt0.67□□□□□ -2.3
RFU1Q08003 YMR324CYMR324C 243 nt0.67□□□□□ -2.3
RFU1Q08003 STB6YKL072W 2301 nt0.67□□□□□ -2.3
RFU1Q08003 SGO1YOR073W 1773 nt0.66□□□□□ -2.3
RFU1Q08003 PRM8YGL053W 714 nt0.66□□□□□ -2.3
RFU1Q08003 YGR265WYGR265W 411 nt0.66□□□□□ -2.3
RFU1Q08003 RCN1YKL159C 636 nt0.66□□□□□ -2.3
RFU1Q08003 RPL9BYNL067W 576 nt0.66□□□□□ -2.3
RFU1Q08003 IRC23YOR044W 474 nt0.66□□□□□ -2.3
RFU1Q08003 SLS1YLR139C 1932 nt0.66□□□□□ -2.3
RFU1Q08003 CRG1YHR209W 876 nt0.65□□□□□ -2.31
RFU1Q08003 YPR159C-AYPR159C-A 102 nt0.65□□□□□ -2.31
RFU1Q08003 SHE4YOR035C 2370 nt0.65□□□□□ -2.31
RFU1Q08003 NUP82YJL061W 2142 nt0.65□□□□□ -2.31
RFU1Q08003 MDM32YOR147W 1869 nt0.65□□□□□ -2.31
RFU1Q08003 DPB11YJL090C 2295 nt0.64□□□□□ -2.31
RFU1Q08003 NHP2YDL208W 471 nt0.64□□□□□ -2.31
RFU1Q08003 DAD1YDR016C 285 nt0.64□□□□□ -2.31
RFU1Q08003 VMA7YGR020C 357 nt0.64□□□□□ -2.31
RFU1Q08003 YIL142C-AYIL142C-A 333 nt0.64□□□□□ -2.31
RFU1Q08003 YBL029C-AYBL029C-A 285 nt0.64□□□□□ -2.31
RFU1Q08003 YMR031W-AYMR031W-A 327 nt0.64□□□□□ -2.31
RFU1Q08003 DDR48YMR173W 1293 nt0.64□□□□□ -2.31
RFU1Q08003 SWS2YNL081C 432 nt0.64□□□□□ -2.31
RFU1Q08003 RPS7BYNL096C 573 nt0.64□□□□□ -2.31
RFU1Q08003 YBL073WYBL073W 312 nt0.64□□□□□ -2.31
RFU1Q08003 YPL119C-AYPL119C-A 264 nt0.64□□□□□ -2.31
RFU1Q08003 CDC24YAL041W 2565 nt0.64□□□□□ -2.31
RFU1Q08003 COG4YPR105C 2586 nt0.64□□□□□ -2.31
RFU1Q08003 SPT21YMR179W 2277 nt0.63□□□□□ -2.31
RFU1Q08003 KAR3YPR141C 2190 nt0.63□□□□□ -2.31
RFU1Q08003 YBR184WYBR184W 1572 nt0.63□□□□□ -2.31
RFU1Q08003 CDC39YCR093W 6327 nt0.63□□□□□ -2.31
RFU1Q08003 GPM2YDL021W 936 nt0.63□□□□□ -2.31
RFU1Q08003 YDL068WYDL068W 330 nt0.63□□□□□ -2.31
RFU1Q08003 SRB7YDR308C 423 nt0.63□□□□□ -2.31
RFU1Q08003 IES5YER092W 378 nt0.63□□□□□ -2.31
RFU1Q08003 CMC4YMR194C-B 222 nt0.63□□□□□ -2.31
RFU1Q08003 REF2YDR195W 1602 nt0.63□□□□□ -2.31
RFU1Q08003 YDR521WYDR521W 336 nt0.62□□□□□ -2.31
RFU1Q08003 TIM8YJR135W-A 264 nt0.62□□□□□ -2.31
RFU1Q08003 YCL046WYCL046W 324 nt0.62□□□□□ -2.31
RFU1Q08003 GDS1YOR355W 1569 nt0.62□□□□□ -2.31
RFU1Q08003 APL3YBL037W 3078 nt0.61□□□□□ -2.31
RFU1Q08003 PAU2YEL049W 363 nt0.61□□□□□ -2.31
RFU1Q08003 CHZ1YER030W 462 nt0.61□□□□□ -2.31
RFU1Q08003 YIL030W-AYIL030W-A 339 nt0.61□□□□□ -2.31
RFU1Q08003 RPL16AYIL133C 600 nt0.61□□□□□ -2.31
RFU1Q08003 YMR272W-AYMR272W-A 114 nt0.61□□□□□ -2.31
RFU1Q08003 IPI3YNL182C 1668 nt0.61□□□□□ -2.31
RFU1Q08003 SEC1YDR164C 2175 nt0.6□□□□□ -2.31
RFU1Q08003 RPL42BYHR141C 321 nt0.6□□□□□ -2.31
RFU1Q08003 RPL42AYNL162W 321 nt0.6□□□□□ -2.31
RFU1Q08003 AIM9YER080W 1884 nt0.6□□□□□ -2.31
RFU1Q08003 DFG10YIL049W 762 nt0.59□□□□□ -2.31
RFU1Q08003 ARV1YLR242C 966 nt0.59□□□□□ -2.31
RFU1Q08003 YPL080CYPL080C 327 nt0.59□□□□□ -2.31
RFU1Q08003 UTP13YLR222C 2454 nt0.58□□□□□ -2.32
RFU1Q08003 snR59snR59 78 nt0.58□□□□□ -2.32
RFU1Q08003 IRC2YDR112W 309 nt0.58□□□□□ -2.32
RFU1Q08003 HTB1YDR224C 396 nt0.58□□□□□ -2.32
RFU1Q08003 YER038W-AYER038W-A 381 nt0.58□□□□□ -2.32
RFU1Q08003 STF2YGR008C 255 nt0.58□□□□□ -2.32
RFU1Q08003 tT(AGU)BtT(AGU)B 73 nt0.58□□□□□ -2.32
RFU1Q08003 tT(AGU)CtT(AGU)C 73 nt0.58□□□□□ -2.32
RFU1Q08003 tT(AGU)DtT(AGU)D 73 nt0.58□□□□□ -2.32
RFU1Q08003 tT(AGU)HtT(AGU)H 73 nt0.58□□□□□ -2.32
RFU1Q08003 tT(AGU)I1tT(AGU)I1 73 nt0.58□□□□□ -2.32
RFU1Q08003 tT(AGU)I2tT(AGU)I2 73 nt0.58□□□□□ -2.32
RFU1Q08003 tT(AGU)JtT(AGU)J 73 nt0.58□□□□□ -2.32
RFU1Q08003 tT(AGU)N1tT(AGU)N1 73 nt0.58□□□□□ -2.32
RFU1Q08003 tT(AGU)N2tT(AGU)N2 73 nt0.58□□□□□ -2.32
RFU1Q08003 tT(AGU)O1tT(AGU)O1 73 nt0.58□□□□□ -2.32
RFU1Q08003 tT(AGU)O2tT(AGU)O2 73 nt0.58□□□□□ -2.32
RFU1Q08003 PAU18YLL064C 363 nt0.58□□□□□ -2.32
RFU1Q08003 SMD3YLR147C 306 nt0.58□□□□□ -2.32
RFU1Q08003 YML009C-AYML009C-A 327 nt0.58□□□□□ -2.32
RFU1Q08003 YMR175W-AYMR175W-A 195 nt0.58□□□□□ -2.32
RFU1Q08003 PAU6YNR076W 363 nt0.58□□□□□ -2.32
RFU1Q08003 SPR2YOR214C 711 nt0.58□□□□□ -2.32
RFU1Q08003 YPR172WYPR172W 603 nt0.58□□□□□ -2.32
RFU1Q08003 NUP120YKL057C 3114 nt0.58□□□□□ -2.32
RFU1Q08003 RKR1YMR247C 4689 nt0.58□□□□□ -2.32
RFU1Q08003 YDR034C-CYDR034C-C 1317 nt0.58□□□□□ -2.32
RFU1Q08003 YFL002W-BYFL002W-B 1317 nt0.58□□□□□ -2.32
RFU1Q08003 YGR161W-AYGR161W-A 1317 nt0.58□□□□□ -2.32
RFU1Q08003 YLR410W-AYLR410W-A 1317 nt0.58□□□□□ -2.32
RFU1Q08003 YBL100W-AYBL100W-A 1317 nt0.58□□□□□ -2.32
RFU1Q08003 YOR192C-AYOR192C-A 1317 nt0.58□□□□□ -2.32
RFU1Q08003 YCL020WYCL020W 1317 nt0.58□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 51 ms