Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 CDC53YDL132W 2448 nt2.49□□□□□ -2.01
BRE1Q07457 BRE1YDL074C 2103 nt2.49□□□□□ -2.01
BRE1Q07457 SMD1YGR074W 441 nt2.49□□□□□ -2.01
BRE1Q07457 TMA22YJR014W 597 nt2.49□□□□□ -2.01
BRE1Q07457 HER1YOR227W 3741 nt2.49□□□□□ -2.01
BRE1Q07457 SNF5YBR289W 2718 nt2.48□□□□□ -2.01
BRE1Q07457 GNT1YOR320C 1476 nt2.48□□□□□ -2.01
BRE1Q07457 DAD3YBR233W-A 285 nt2.48□□□□□ -2.01
BRE1Q07457 HIT1YJR055W 495 nt2.47□□□□□ -2.01
BRE1Q07457 YOR146WYOR146W 306 nt2.47□□□□□ -2.01
BRE1Q07457 YOR333CYOR333C 417 nt2.47□□□□□ -2.01
BRE1Q07457 GPX2YBR244W 489 nt2.47□□□□□ -2.01
BRE1Q07457 VPS35YJL154C 2835 nt2.47□□□□□ -2.01
BRE1Q07457 MNE1YOR350C 1992 nt2.47□□□□□ -2.01
BRE1Q07457 GRR1YJR090C 3456 nt2.46□□□□□ -2.02
BRE1Q07457 YER023C-AYER023C-A 213 nt2.46□□□□□ -2.02
BRE1Q07457 YLR434CYLR434C 384 nt2.46□□□□□ -2.02
BRE1Q07457 UBC7YMR022W 498 nt2.46□□□□□ -2.02
BRE1Q07457 DGR1YNL130C-A 147 nt2.46□□□□□ -2.02
BRE1Q07457 MF(ALPHA)1YPL187W 498 nt2.46□□□□□ -2.02
BRE1Q07457 YHR028W-AYHR028W-A 321 nt2.45□□□□□ -2.02
BRE1Q07457 YKR075W-AYKR075W-A 270 nt2.45□□□□□ -2.02
BRE1Q07457 CAT2YML042W 2013 nt2.45□□□□□ -2.02
BRE1Q07457 DOT6YER088C 2013 nt2.44□□□□□ -2.02
BRE1Q07457 YHR214C-BYHR214C-B 5382 nt2.44□□□□□ -2.02
BRE1Q07457 SMY1YKL079W 1971 nt2.44□□□□□ -2.02
BRE1Q07457 RTT102YGR275W 474 nt2.44□□□□□ -2.02
BRE1Q07457 YBR012CYBR012C 420 nt2.44□□□□□ -2.02
BRE1Q07457 ATG9YDL149W 2994 nt2.44□□□□□ -2.02
BRE1Q07457 KOG1YHR186C 4674 nt2.44□□□□□ -2.02
BRE1Q07457 ELG1YOR144C 2376 nt2.44□□□□□ -2.02
BRE1Q07457 BUD2YKL092C 3315 nt2.43□□□□□ -2.02
BRE1Q07457 EMP24YGL200C 612 nt2.43□□□□□ -2.02
BRE1Q07457 YPL182CYPL182C 384 nt2.43□□□□□ -2.02
BRE1Q07457 YPL238CYPL238C 390 nt2.43□□□□□ -2.02
BRE1Q07457 YBR121C-AYBR121C-A 159 nt2.43□□□□□ -2.02
BRE1Q07457 MGA2YIR033W 3342 nt2.43□□□□□ -2.02
BRE1Q07457 PDR8YLR266C 2106 nt2.42□□□□□ -2.02
BRE1Q07457 MNL2YLR057W 2550 nt2.42□□□□□ -2.02
BRE1Q07457 CDC27YBL084C 2277 nt2.42□□□□□ -2.02
BRE1Q07457 SSQ1YLR369W 1974 nt2.42□□□□□ -2.02
BRE1Q07457 NOT5YPR072W 1683 nt2.42□□□□□ -2.02
BRE1Q07457 SWT1YOR166C 1377 nt2.42□□□□□ -2.02
BRE1Q07457 ATG31YDR022C 591 nt2.42□□□□□ -2.02
BRE1Q07457 YDR524W-CYDR524W-C 90 nt2.42□□□□□ -2.02
BRE1Q07457 TOR2YKL203C 7425 nt2.42□□□□□ -2.02
BRE1Q07457 GYP5YPL249C 2685 nt2.42□□□□□ -2.02
BRE1Q07457 QCR7YDR529C 384 nt2.41□□□□□ -2.02
BRE1Q07457 YGL069CYGL069C 465 nt2.41□□□□□ -2.02
BRE1Q07457 YML009C-AYML009C-A 327 nt2.41□□□□□ -2.02
BRE1Q07457 CSF1YLR087C 8877 nt2.41□□□□□ -2.02
BRE1Q07457 ATG11YPR049C 3537 nt2.41□□□□□ -2.02
BRE1Q07457 PET309YLR067C 2898 nt2.41□□□□□ -2.02
BRE1Q07457 YER137W-AYER137W-A 306 nt2.4□□□□□ -2.03
BRE1Q07457 YOR121CYOR121C 306 nt2.4□□□□□ -2.03
BRE1Q07457 YER172C-AYER172C-A 381 nt2.39□□□□□ -2.03
BRE1Q07457 RPL9BYNL067W 576 nt2.39□□□□□ -2.03
BRE1Q07457 YBR224WYBR224W 516 nt2.39□□□□□ -2.03
BRE1Q07457 VMA9YCL005W-A 222 nt2.39□□□□□ -2.03
BRE1Q07457 VMR1YHL035C 4779 nt2.39□□□□□ -2.03
BRE1Q07457 YDR341CYDR341C 1824 nt2.39□□□□□ -2.03
BRE1Q07457 SCH9YHR205W 2475 nt2.39□□□□□ -2.03
BRE1Q07457 NAM7YMR080C 2916 nt2.38□□□□□ -2.03
BRE1Q07457 RPL37BYDR500C 267 nt2.38□□□□□ -2.03
BRE1Q07457 SPO22YIL073C 2928 nt2.38□□□□□ -2.03
BRE1Q07457 YAL063C-AYAL063C-A 291 nt2.38□□□□□ -2.03
BRE1Q07457 YLR053CYLR053C 327 nt2.38□□□□□ -2.03
BRE1Q07457 TMA7YLR262C-A 195 nt2.38□□□□□ -2.03
BRE1Q07457 YBR184WYBR184W 1572 nt2.38□□□□□ -2.03
BRE1Q07457 FIG2YCR089W 4830 nt2.38□□□□□ -2.03
BRE1Q07457 PEP3YLR148W 2757 nt2.38□□□□□ -2.03
BRE1Q07457 FAB1YFR019W 6837 nt2.37□□□□□ -2.03
BRE1Q07457 SEC31YDL195W 3822 nt2.37□□□□□ -2.03
BRE1Q07457 HCS1YKL017C 2052 nt2.37□□□□□ -2.03
BRE1Q07457 SYH1YPL105C 2550 nt2.37□□□□□ -2.03
BRE1Q07457 DAD4YDR320C-A 219 nt2.37□□□□□ -2.03
BRE1Q07457 YGL239CYGL239C 315 nt2.37□□□□□ -2.03
BRE1Q07457 YLR149CYLR149C 2193 nt2.37□□□□□ -2.03
BRE1Q07457 LYS9YNR050C 1341 nt2.37□□□□□ -2.03
BRE1Q07457 MGM1YOR211C 2646 nt2.37□□□□□ -2.03
BRE1Q07457 YDL011CYDL011C 324 nt2.36□□□□□ -2.03
BRE1Q07457 RPA34YJL148W 702 nt2.36□□□□□ -2.03
BRE1Q07457 RPS27AYKL156W 249 nt2.36□□□□□ -2.03
BRE1Q07457 YOL159C-AYOL159C-A 273 nt2.36□□□□□ -2.03
BRE1Q07457 YPR099CYPR099C 357 nt2.36□□□□□ -2.03
BRE1Q07457 YCL023CYCL023C 348 nt2.36□□□□□ -2.03
BRE1Q07457 FKS1YLR342W 5631 nt2.35□□□□□ -2.03
BRE1Q07457 YPR197CYPR197C 564 nt2.35□□□□□ -2.03
BRE1Q07457 SET2YJL168C 2202 nt2.35□□□□□ -2.03
BRE1Q07457 USO1YDL058W 5373 nt2.35□□□□□ -2.03
BRE1Q07457 YJR098CYJR098C 1971 nt2.34□□□□□ -2.03
BRE1Q07457 RBK1YCR036W 1002 nt2.34□□□□□ -2.03
BRE1Q07457 YDR286CYDR286C 345 nt2.34□□□□□ -2.03
BRE1Q07457 YIL066W-AYIL066W-A 444 nt2.34□□□□□ -2.03
BRE1Q07457 PCF11YDR228C 1881 nt2.34□□□□□ -2.03
BRE1Q07457 SLM1YIL105C 2061 nt2.33□□□□□ -2.04
BRE1Q07457 NEO1YIL048W 3456 nt2.33□□□□□ -2.04
BRE1Q07457 SPP41YDR464W 4308 nt2.33□□□□□ -2.04
BRE1Q07457 TOF2YKR010C 2316 nt2.33□□□□□ -2.04
BRE1Q07457 HOP2YGL033W 657 nt2.33□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 32.1 ms