Protein–RNA interactions for Protein: Q06217

SMD2, Small nuclear ribonucleoprotein Sm D2, yeastyeast

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD2Q06217 tT(AGU)DtT(AGU)D 73 nt0.77□□□□□ -2.29
SMD2Q06217 tT(AGU)HtT(AGU)H 73 nt0.77□□□□□ -2.29
SMD2Q06217 tT(AGU)I1tT(AGU)I1 73 nt0.77□□□□□ -2.29
SMD2Q06217 tT(AGU)I2tT(AGU)I2 73 nt0.77□□□□□ -2.29
SMD2Q06217 tT(AGU)JtT(AGU)J 73 nt0.77□□□□□ -2.29
SMD2Q06217 tT(AGU)N1tT(AGU)N1 73 nt0.77□□□□□ -2.29
SMD2Q06217 tT(AGU)N2tT(AGU)N2 73 nt0.77□□□□□ -2.29
SMD2Q06217 tT(AGU)O1tT(AGU)O1 73 nt0.77□□□□□ -2.29
SMD2Q06217 tT(AGU)O2tT(AGU)O2 73 nt0.77□□□□□ -2.29
SMD2Q06217 NBP1YLR457C 960 nt0.77□□□□□ -2.29
SMD2Q06217 STB6YKL072W 2301 nt0.76□□□□□ -2.29
SMD2Q06217 YDR194W-AYDR194W-A 153 nt0.75□□□□□ -2.29
SMD2Q06217 PHS1YJL097W 654 nt0.75□□□□□ -2.29
SMD2Q06217 YMR031W-AYMR031W-A 327 nt0.75□□□□□ -2.29
SMD2Q06217 RTC6YPL183W-A 282 nt0.75□□□□□ -2.29
SMD2Q06217 ROX1YPR065W 1107 nt0.75□□□□□ -2.29
SMD2Q06217 PPE1YHR075C 1203 nt0.74□□□□□ -2.29
SMD2Q06217 HIT1YJR055W 495 nt0.74□□□□□ -2.29
SMD2Q06217 GIM5YML094W 492 nt0.74□□□□□ -2.29
SMD2Q06217 YNL179CYNL179C 438 nt0.74□□□□□ -2.29
SMD2Q06217 YOR032W-AYOR032W-A 201 nt0.74□□□□□ -2.29
SMD2Q06217 AIM44YPL158C 2277 nt0.74□□□□□ -2.29
SMD2Q06217 SGD1YLR336C 2700 nt0.74□□□□□ -2.29
SMD2Q06217 YER087C-AYER087C-A 552 nt0.73□□□□□ -2.29
SMD2Q06217 RAD6YGL058W 519 nt0.73□□□□□ -2.29
SMD2Q06217 YOR169CYOR169C 465 nt0.73□□□□□ -2.29
SMD2Q06217 TOF2YKR010C 2316 nt0.73□□□□□ -2.29
SMD2Q06217 AIM9YER080W 1884 nt0.72□□□□□ -2.29
SMD2Q06217 tF(GAA)BtF(GAA)B 73 nt0.72□□□□□ -2.29
SMD2Q06217 tF(GAA)FtF(GAA)F 73 nt0.72□□□□□ -2.29
SMD2Q06217 tF(GAA)GtF(GAA)G 73 nt0.72□□□□□ -2.29
SMD2Q06217 tF(GAA)H1tF(GAA)H1 73 nt0.72□□□□□ -2.29
SMD2Q06217 tF(GAA)H2tF(GAA)H2 73 nt0.72□□□□□ -2.29
SMD2Q06217 tF(GAA)MtF(GAA)M 73 nt0.72□□□□□ -2.29
SMD2Q06217 tF(GAA)P1tF(GAA)P1 73 nt0.72□□□□□ -2.29
SMD2Q06217 tF(GAA)P2tF(GAA)P2 73 nt0.72□□□□□ -2.29
SMD2Q06217 IES5YER092W 378 nt0.72□□□□□ -2.29
SMD2Q06217 HOT13YKL084W 351 nt0.72□□□□□ -2.29
SMD2Q06217 SWT1YOR166C 1377 nt0.71□□□□□ -2.3
SMD2Q06217 YMR160WYMR160W 2451 nt0.71□□□□□ -2.3
SMD2Q06217 URM1YIL008W 300 nt0.71□□□□□ -2.3
SMD2Q06217 PSF2YJL072C 642 nt0.71□□□□□ -2.3
SMD2Q06217 YLL007CYLL007C 1998 nt0.7□□□□□ -2.3
SMD2Q06217 RPL29YFR032C-A 180 nt0.7□□□□□ -2.3
SMD2Q06217 YGL109WYGL109W 324 nt0.7□□□□□ -2.3
SMD2Q06217 YHL002C-AYHL002C-A 489 nt0.7□□□□□ -2.3
SMD2Q06217 YIR020C-BYIR020C-B 735 nt0.7□□□□□ -2.3
SMD2Q06217 VPS63YLR261C 327 nt0.7□□□□□ -2.3
SMD2Q06217 PXA2YKL188C 2562 nt0.7□□□□□ -2.3
SMD2Q06217 GEP7YGL057C 864 nt0.69□□□□□ -2.3
SMD2Q06217 BRX1YOL077C 876 nt0.69□□□□□ -2.3
SMD2Q06217 snR34snR34 203 nt0.69□□□□□ -2.3
SMD2Q06217 YCK3YER123W 1575 nt0.69□□□□□ -2.3
SMD2Q06217 GDS1YOR355W 1569 nt0.69□□□□□ -2.3
SMD2Q06217 YBR184WYBR184W 1572 nt0.69□□□□□ -2.3
SMD2Q06217 DPB11YJL090C 2295 nt0.68□□□□□ -2.3
SMD2Q06217 SWI6YLR182W 2412 nt0.68□□□□□ -2.3
SMD2Q06217 SLS1YLR139C 1932 nt0.68□□□□□ -2.3
SMD2Q06217 CYC7YEL039C 342 nt0.67□□□□□ -2.3
SMD2Q06217 QCR9YGR183C 201 nt0.67□□□□□ -2.3
SMD2Q06217 CRG1YHR209W 876 nt0.67□□□□□ -2.3
SMD2Q06217 RCN1YKL159C 636 nt0.67□□□□□ -2.3
SMD2Q06217 snR24snR24 89 nt0.67□□□□□ -2.3
SMD2Q06217 SET3YKR029C 2256 nt0.66□□□□□ -2.3
SMD2Q06217 NTF2YER009W 378 nt0.66□□□□□ -2.3
SMD2Q06217 SMD3YLR147C 306 nt0.66□□□□□ -2.3
SMD2Q06217 YOR366WYOR366W 354 nt0.66□□□□□ -2.3
SMD2Q06217 YJL086CYJL086C 369 nt0.65□□□□□ -2.31
SMD2Q06217 YKL145W-AYKL145W-A 93 nt0.65□□□□□ -2.31
SMD2Q06217 YBR012CYBR012C 420 nt0.65□□□□□ -2.31
SMD2Q06217 UBP3YER151C 2739 nt0.65□□□□□ -2.31
SMD2Q06217 GSP1YLR293C 660 nt0.64□□□□□ -2.31
SMD2Q06217 YMR272W-AYMR272W-A 114 nt0.64□□□□□ -2.31
SMD2Q06217 YBR200W-AYBR200W-A 165 nt0.64□□□□□ -2.31
SMD2Q06217 NOC3YLR002C 1992 nt0.64□□□□□ -2.31
SMD2Q06217 MPT5YGL178W 2580 nt0.64□□□□□ -2.31
SMD2Q06217 RTR2YDR066C 591 nt0.63□□□□□ -2.31
SMD2Q06217 ATC1YDR184C 885 nt0.63□□□□□ -2.31
SMD2Q06217 PAU2YEL049W 363 nt0.63□□□□□ -2.31
SMD2Q06217 CHZ1YER030W 462 nt0.63□□□□□ -2.31
SMD2Q06217 PAU12YGR294W 363 nt0.63□□□□□ -2.31
SMD2Q06217 PAU18YLL064C 363 nt0.63□□□□□ -2.31
SMD2Q06217 SEC22YLR268W 645 nt0.63□□□□□ -2.31
SMD2Q06217 PAU6YNR076W 363 nt0.63□□□□□ -2.31
SMD2Q06217 YOR218CYOR218C 420 nt0.63□□□□□ -2.31
SMD2Q06217 NUT2YPR168W 474 nt0.63□□□□□ -2.31
SMD2Q06217 BUD3YCL014W 4911 nt0.62□□□□□ -2.31
SMD2Q06217 YLR163W-AYLR163W-A 114 nt0.62□□□□□ -2.31
SMD2Q06217 YPR172WYPR172W 603 nt0.62□□□□□ -2.31
SMD2Q06217 SAG1YJR004C 1953 nt0.62□□□□□ -2.31
SMD2Q06217 YML002WYML002W 2214 nt0.62□□□□□ -2.31
SMD2Q06217 YDL206WYDL206W 2289 nt0.62□□□□□ -2.31
SMD2Q06217 SMB1YER029C 591 nt0.61□□□□□ -2.31
SMD2Q06217 YDR034C-CYDR034C-C 1317 nt0.61□□□□□ -2.31
SMD2Q06217 YFL002W-BYFL002W-B 1317 nt0.61□□□□□ -2.31
SMD2Q06217 YGR161W-AYGR161W-A 1317 nt0.61□□□□□ -2.31
SMD2Q06217 YLR410W-AYLR410W-A 1317 nt0.61□□□□□ -2.31
SMD2Q06217 YBL100W-AYBL100W-A 1317 nt0.61□□□□□ -2.31
SMD2Q06217 YOR192C-AYOR192C-A 1317 nt0.61□□□□□ -2.31
SMD2Q06217 YCL020WYCL020W 1317 nt0.61□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 43.8 ms