Protein–RNA interactions for Protein: Q03124

RSC9, Chromatin structure-remodeling complex subunit RSC9, yeastyeast

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSC9Q03124 tW(CCA)G2tW(CCA)G2 72 nt2.36□□□□□ -2.03
RSC9Q03124 tW(CCA)JtW(CCA)J 72 nt2.36□□□□□ -2.03
RSC9Q03124 tW(CCA)KtW(CCA)K 72 nt2.36□□□□□ -2.03
RSC9Q03124 tW(CCA)MtW(CCA)M 72 nt2.36□□□□□ -2.03
RSC9Q03124 tW(CCA)PtW(CCA)P 72 nt2.36□□□□□ -2.03
RSC9Q03124 YJL197C-AYJL197C-A 282 nt2.36□□□□□ -2.03
RSC9Q03124 YOL155W-AYOL155W-A 135 nt2.36□□□□□ -2.03
RSC9Q03124 SAR1YPL218W 573 nt2.36□□□□□ -2.03
RSC9Q03124 MCD1YDL003W 1701 nt2.36□□□□□ -2.03
RSC9Q03124 RSE1YML049C 4086 nt2.36□□□□□ -2.03
RSC9Q03124 DNL4YOR005C 2835 nt2.36□□□□□ -2.03
RSC9Q03124 HCS1YKL017C 2052 nt2.35□□□□□ -2.03
RSC9Q03124 RBK1YCR036W 1002 nt2.35□□□□□ -2.03
RSC9Q03124 YGL014C-AYGL014C-A 162 nt2.35□□□□□ -2.03
RSC9Q03124 YHL041WYHL041W 450 nt2.35□□□□□ -2.03
RSC9Q03124 PHS1YJL097W 654 nt2.35□□□□□ -2.03
RSC9Q03124 YAL059C-AYAL059C-A 423 nt2.35□□□□□ -2.03
RSC9Q03124 MRPL33YMR286W 261 nt2.35□□□□□ -2.03
RSC9Q03124 YOR008C-AYOR008C-A 225 nt2.35□□□□□ -2.03
RSC9Q03124 YOR055WYOR055W 435 nt2.35□□□□□ -2.03
RSC9Q03124 SWR1YDR334W 4545 nt2.35□□□□□ -2.03
RSC9Q03124 IPT1YDR072C 1584 nt2.35□□□□□ -2.03
RSC9Q03124 TRA1YHR099W 11235 nt2.35□□□□□ -2.03
RSC9Q03124 DIS3YOL021C 3006 nt2.34□□□□□ -2.03
RSC9Q03124 RPL36AYMR194W 303 nt2.34□□□□□ -2.03
RSC9Q03124 RTC6YPL183W-A 282 nt2.34□□□□□ -2.03
RSC9Q03124 YBR064WYBR064W 429 nt2.34□□□□□ -2.03
RSC9Q03124 GEA1YJR031C 4227 nt2.34□□□□□ -2.04
RSC9Q03124 RRP12YPL012W 3687 nt2.34□□□□□ -2.04
RSC9Q03124 RGR1YLR071C 3249 nt2.34□□□□□ -2.04
RSC9Q03124 YJL070CYJL070C 2667 nt2.34□□□□□ -2.04
RSC9Q03124 RLI1YDR091C 1827 nt2.33□□□□□ -2.04
RSC9Q03124 RIM20YOR275C 1986 nt2.33□□□□□ -2.04
RSC9Q03124 snR76snR76 109 nt2.33□□□□□ -2.04
RSC9Q03124 Q0092Q0092 141 nt2.33□□□□□ -2.04
RSC9Q03124 YHL042WYHL042W 453 nt2.33□□□□□ -2.04
RSC9Q03124 YHR032W-AYHR032W-A 180 nt2.33□□□□□ -2.04
RSC9Q03124 RGM1YMR182C 636 nt2.33□□□□□ -2.04
RSC9Q03124 LSM7YNL147W 348 nt2.33□□□□□ -2.04
RSC9Q03124 DOT6YER088C 2013 nt2.33□□□□□ -2.04
RSC9Q03124 COG8YML071C 1824 nt2.33□□□□□ -2.04
RSC9Q03124 IRA2YOL081W 9240 nt2.32□□□□□ -2.04
RSC9Q03124 VPS13YLL040C 9435 nt2.32□□□□□ -2.04
RSC9Q03124 YDL025W-AYDL025W-A 105 nt2.32□□□□□ -2.04
RSC9Q03124 ISD11YER048W-A 285 nt2.32□□□□□ -2.04
RSC9Q03124 APQ12YIL040W 417 nt2.32□□□□□ -2.04
RSC9Q03124 PAM16YJL104W 450 nt2.32□□□□□ -2.04
RSC9Q03124 YLR053CYLR053C 327 nt2.32□□□□□ -2.04
RSC9Q03124 IES4YOR189W 351 nt2.32□□□□□ -2.04
RSC9Q03124 YCL023CYCL023C 348 nt2.32□□□□□ -2.04
RSC9Q03124 MPH1YIR002C 2982 nt2.32□□□□□ -2.04
RSC9Q03124 SNU114YKL173W 3027 nt2.31□□□□□ -2.04
RSC9Q03124 YIL059CYIL059C 366 nt2.31□□□□□ -2.04
RSC9Q03124 RPA34YJL148W 702 nt2.31□□□□□ -2.04
RSC9Q03124 DNA2YHR164C 4569 nt2.3□□□□□ -2.04
RSC9Q03124 YGL069CYGL069C 465 nt2.3□□□□□ -2.04
RSC9Q03124 GRX8YLR364W 330 nt2.3□□□□□ -2.04
RSC9Q03124 NCL1YBL024W 2055 nt2.3□□□□□ -2.04
RSC9Q03124 SGD1YLR336C 2700 nt2.3□□□□□ -2.04
RSC9Q03124 PDR11YIL013C 4236 nt2.29□□□□□ -2.04
RSC9Q03124 snR55snR55 98 nt2.29□□□□□ -2.04
RSC9Q03124 YLR466C-BYLR466C-B 117 nt2.29□□□□□ -2.04
RSC9Q03124 KSP1YHR082C 3090 nt2.29□□□□□ -2.04
RSC9Q03124 DFG16YOR030W 1860 nt2.28□□□□□ -2.04
RSC9Q03124 PTC5YOR090C 1719 nt2.28□□□□□ -2.04
RSC9Q03124 YDR239CYDR239C 2364 nt2.28□□□□□ -2.04
RSC9Q03124 YOL098CYOL098C 3114 nt2.28□□□□□ -2.04
RSC9Q03124 STE11YLR362W 2154 nt2.28□□□□□ -2.04
RSC9Q03124 snR70snR70 164 nt2.28□□□□□ -2.04
RSC9Q03124 YJL182CYJL182C 318 nt2.28□□□□□ -2.04
RSC9Q03124 UBP11YKR098C 2154 nt2.27□□□□□ -2.05
RSC9Q03124 PAN3YKL025C 2040 nt2.27□□□□□ -2.05
RSC9Q03124 HDA3YPR179C 1968 nt2.27□□□□□ -2.05
RSC9Q03124 snR60snR60 104 nt2.27□□□□□ -2.05
RSC9Q03124 NPC2YDL046W 522 nt2.27□□□□□ -2.05
RSC9Q03124 YGR151CYGR151C 336 nt2.27□□□□□ -2.05
RSC9Q03124 YOL160WYOL160W 342 nt2.27□□□□□ -2.05
RSC9Q03124 YOR011W-AYOR011W-A 207 nt2.27□□□□□ -2.05
RSC9Q03124 HHT1YBR010W 411 nt2.27□□□□□ -2.05
RSC9Q03124 YPR089WYPR089W 2667 nt2.27□□□□□ -2.05
RSC9Q03124 SAK1YER129W 3429 nt2.27□□□□□ -2.05
RSC9Q03124 SSN2YDR443C 4263 nt2.27□□□□□ -2.05
RSC9Q03124 ISW1YBR245C 3390 nt2.26□□□□□ -2.05
RSC9Q03124 NEW1YPL226W 3591 nt2.26□□□□□ -2.05
RSC9Q03124 ALK2YBL009W 2031 nt2.26□□□□□ -2.05
RSC9Q03124 SOK2YMR016C 2358 nt2.26□□□□□ -2.05
RSC9Q03124 YIL156W-BYIL156W-B 222 nt2.26□□□□□ -2.05
RSC9Q03124 PFD1YJL179W 330 nt2.26□□□□□ -2.05
RSC9Q03124 YPR063CYPR063C 423 nt2.26□□□□□ -2.05
RSC9Q03124 PHO91YNR013C 2685 nt2.26□□□□□ -2.05
RSC9Q03124 DNF1YER166W 4716 nt2.26□□□□□ -2.05
RSC9Q03124 NPR2YEL062W 1848 nt2.26□□□□□ -2.05
RSC9Q03124 TOF2YKR010C 2316 nt2.25□□□□□ -2.05
RSC9Q03124 PDR3YBL005W 2931 nt2.25□□□□□ -2.05
RSC9Q03124 GUP1YGL084C 1683 nt2.25□□□□□ -2.05
RSC9Q03124 EMC6YLL014W 327 nt2.25□□□□□ -2.05
RSC9Q03124 YGR250CYGR250C 2346 nt2.24□□□□□ -2.05
RSC9Q03124 YLL032CYLL032C 2478 nt2.24□□□□□ -2.05
RSC9Q03124 PCC1YKR095W-A 267 nt2.24□□□□□ -2.05
RSC9Q03124 RPL38YLR325C 237 nt2.24□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 48.1 ms