Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 RPH1YER169W 2391 nt1.45□□□□□ -2.18
UFD1P53044 IRA1YBR140C 9279 nt1.45□□□□□ -2.18
UFD1P53044 RBK1YCR036W 1002 nt1.45□□□□□ -2.18
UFD1P53044 AIM29YKR074W 468 nt1.45□□□□□ -2.18
UFD1P53044 YLR456WYLR456W 615 nt1.45□□□□□ -2.18
UFD1P53044 YML108WYML108W 318 nt1.45□□□□□ -2.18
UFD1P53044 FYV12YOR183W 390 nt1.45□□□□□ -2.18
UFD1P53044 YPL068CYPL068C 882 nt1.45□□□□□ -2.18
UFD1P53044 YLR149CYLR149C 2193 nt1.45□□□□□ -2.18
UFD1P53044 MEC1YBR136W 7107 nt1.45□□□□□ -2.18
UFD1P53044 TDA9YML081W 3756 nt1.45□□□□□ -2.18
UFD1P53044 COX1Q0045 1605 nt1.44□□□□□ -2.18
UFD1P53044 PLC1YPL268W 2610 nt1.44□□□□□ -2.18
UFD1P53044 ARP7YPR034W 1434 nt1.44□□□□□ -2.18
UFD1P53044 YGR025WYGR025W 303 nt1.44□□□□□ -2.18
UFD1P53044 YHR214W-AYHR214W-A 486 nt1.44□□□□□ -2.18
UFD1P53044 YAR068WYAR068W 486 nt1.44□□□□□ -2.18
UFD1P53044 CYB5YNL111C 363 nt1.44□□□□□ -2.18
UFD1P53044 SMY1YKL079W 1971 nt1.44□□□□□ -2.18
UFD1P53044 PEP3YLR148W 2757 nt1.44□□□□□ -2.18
UFD1P53044 CFT1YDR301W 4074 nt1.44□□□□□ -2.18
UFD1P53044 CHS1YNL192W 3396 nt1.44□□□□□ -2.18
UFD1P53044 YOR192C-AYOR192C-A 1317 nt1.43□□□□□ -2.18
UFD1P53044 HMLALPHA2YCL067C 633 nt1.43□□□□□ -2.18
UFD1P53044 YCR001WYCR001W 315 nt1.43□□□□□ -2.18
UFD1P53044 MATALPHA2YCR039C 633 nt1.43□□□□□ -2.18
UFD1P53044 IES5YER092W 378 nt1.43□□□□□ -2.18
UFD1P53044 YGL024WYGL024W 336 nt1.43□□□□□ -2.18
UFD1P53044 YLR202CYLR202C 327 nt1.43□□□□□ -2.18
UFD1P53044 CMC2YBL059C-A 330 nt1.43□□□□□ -2.18
UFD1P53044 TOM22YNL131W 459 nt1.43□□□□□ -2.18
UFD1P53044 ATP19YOL077W-A 207 nt1.43□□□□□ -2.18
UFD1P53044 snR13snR13 124 nt1.43□□□□□ -2.18
UFD1P53044 SAC3YDR159W 3906 nt1.43□□□□□ -2.18
UFD1P53044 TBS1YBR150C 3285 nt1.43□□□□□ -2.18
UFD1P53044 BRR2YER172C 6492 nt1.43□□□□□ -2.18
UFD1P53044 BI2Q0110 1272 nt1.42□□□□□ -2.18
UFD1P53044 YER121WYER121W 345 nt1.42□□□□□ -2.18
UFD1P53044 PRE4YFR050C 801 nt1.42□□□□□ -2.18
UFD1P53044 YHR073W-AYHR073W-A 177 nt1.42□□□□□ -2.18
UFD1P53044 CDC33YOL139C 642 nt1.42□□□□□ -2.18
UFD1P53044 YBR121C-AYBR121C-A 159 nt1.42□□□□□ -2.18
UFD1P53044 snR41snR41 95 nt1.42□□□□□ -2.18
UFD1P53044 YGR109W-BYGR109W-B 4644 nt1.42□□□□□ -2.18
UFD1P53044 SPC110YDR356W 2835 nt1.41□□□□□ -2.18
UFD1P53044 NUP192YJL039C 5052 nt1.41□□□□□ -2.18
UFD1P53044 YSW1YBR148W 1830 nt1.41□□□□□ -2.18
UFD1P53044 CDC24YAL041W 2565 nt1.41□□□□□ -2.18
UFD1P53044 DOT6YER088C 2013 nt1.41□□□□□ -2.18
UFD1P53044 YCR102W-AYCR102W-A 198 nt1.41□□□□□ -2.18
UFD1P53044 ATP17YDR377W 306 nt1.41□□□□□ -2.18
UFD1P53044 HUR1YGL168W 333 nt1.41□□□□□ -2.18
UFD1P53044 YLR171WYLR171W 390 nt1.41□□□□□ -2.18
UFD1P53044 RPS18BYML026C 441 nt1.41□□□□□ -2.18
UFD1P53044 YPL238CYPL238C 390 nt1.41□□□□□ -2.18
UFD1P53044 YBR184WYBR184W 1572 nt1.41□□□□□ -2.18
UFD1P53044 YBP1YBR216C 2025 nt1.4□□□□□ -2.18
UFD1P53044 YJR039WYJR039W 3366 nt1.4□□□□□ -2.19
UFD1P53044 NBL1YHR199C-A 222 nt1.4□□□□□ -2.19
UFD1P53044 CRG1YHR209W 876 nt1.4□□□□□ -2.19
UFD1P53044 FCF2YLR051C 654 nt1.4□□□□□ -2.19
UFD1P53044 YOR146WYOR146W 306 nt1.4□□□□□ -2.19
UFD1P53044 YBR076C-AYBR076C-A 267 nt1.4□□□□□ -2.19
UFD1P53044 GRR1YJR090C 3456 nt1.4□□□□□ -2.19
UFD1P53044 TRM3YDL112W 4311 nt1.4□□□□□ -2.19
UFD1P53044 YJR098CYJR098C 1971 nt1.39□□□□□ -2.19
UFD1P53044 SFB2YNL049C 2631 nt1.39□□□□□ -2.19
UFD1P53044 PET127YOR017W 2403 nt1.39□□□□□ -2.19
UFD1P53044 FYV8YGR196C 2454 nt1.39□□□□□ -2.19
UFD1P53044 YCR043CYCR043C 384 nt1.39□□□□□ -2.19
UFD1P53044 PAU3YCR104W 375 nt1.39□□□□□ -2.19
UFD1P53044 QCR7YDR529C 384 nt1.39□□□□□ -2.19
UFD1P53044 YHR125WYHR125W 306 nt1.39□□□□□ -2.19
UFD1P53044 RPL42BYHR141C 321 nt1.39□□□□□ -2.19
UFD1P53044 YMR230W-AYMR230W-A 189 nt1.39□□□□□ -2.19
UFD1P53044 RPL42AYNL162W 321 nt1.39□□□□□ -2.19
UFD1P53044 YLR422WYLR422W 5799 nt1.39□□□□□ -2.19
UFD1P53044 IRE1YHR079C 3348 nt1.38□□□□□ -2.19
UFD1P53044 ZRG8YER033C 3231 nt1.38□□□□□ -2.19
UFD1P53044 YOR019WYOR019W 2193 nt1.38□□□□□ -2.19
UFD1P53044 CCH1YGR217W 6120 nt1.38□□□□□ -2.19
UFD1P53044 ECL1YGR146C 636 nt1.38□□□□□ -2.19
UFD1P53044 TIF11YMR260C 462 nt1.38□□□□□ -2.19
UFD1P53044 PGA1YNL158W 597 nt1.38□□□□□ -2.19
UFD1P53044 snR54snR54 86 nt1.38□□□□□ -2.19
UFD1P53044 HIR3YJR140C 4947 nt1.38□□□□□ -2.19
UFD1P53044 POL5YEL055C 3069 nt1.38□□□□□ -2.19
UFD1P53044 ASM4YDL088C 1587 nt1.38□□□□□ -2.19
UFD1P53044 SSK2YNR031C 4740 nt1.38□□□□□ -2.19
UFD1P53044 DAS1YJL149W 1992 nt1.38□□□□□ -2.19
UFD1P53044 SEF1YBL066C 3447 nt1.37□□□□□ -2.19
UFD1P53044 RPL31AYDL075W 342 nt1.37□□□□□ -2.19
UFD1P53044 YER135CYER135C 393 nt1.37□□□□□ -2.19
UFD1P53044 TFC8YPL007C 1767 nt1.36□□□□□ -2.19
UFD1P53044 MON2YNL297C 4911 nt1.36□□□□□ -2.19
UFD1P53044 RVS161YCR009C 798 nt1.36□□□□□ -2.19
UFD1P53044 CGI121YML036W 546 nt1.36□□□□□ -2.19
UFD1P53044 COA6YMR244C-A 315 nt1.36□□□□□ -2.19
UFD1P53044 YKL183C-AYKL183C-A 213 nt1.35□□□□□ -2.19
UFD1P53044 YMR153C-AYMR153C-A 336 nt1.35□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 36.7 ms