Protein–RNA interactions for Protein: P40020

FIR1, Factor interacting with REF2, yeastyeast

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
FIR1P40020 snR76snR76 109 nt3.27□□□□□ -1.89
FIR1P40020 YPR092WYPR092W 306 nt3.27□□□□□ -1.89
FIR1P40020 VMA9YCL005W-A 222 nt3.27□□□□□ -1.89
FIR1P40020 VPS54YDR027C 2670 nt3.27□□□□□ -1.89
FIR1P40020 HEF3YNL014W 3135 nt3.27□□□□□ -1.89
FIR1P40020 PTC5YOR090C 1719 nt3.27□□□□□ -1.89
FIR1P40020 PLC1YPL268W 2610 nt3.26□□□□□ -1.89
FIR1P40020 PEX8YGR077C 1770 nt3.26□□□□□ -1.89
FIR1P40020 YGL217CYGL217C 342 nt3.26□□□□□ -1.89
FIR1P40020 SNT1YCR033W 3681 nt3.26□□□□□ -1.89
FIR1P40020 MET5YJR137C 4329 nt3.26□□□□□ -1.89
FIR1P40020 RIX1YHR197W 2292 nt3.26□□□□□ -1.89
FIR1P40020 NOP53YPL146C 1368 nt3.25□□□□□ -1.89
FIR1P40020 SLN1YIL147C 3663 nt3.25□□□□□ -1.89
FIR1P40020 YIR030W-AYIR030W-A 384 nt3.25□□□□□ -1.89
FIR1P40020 SNC2YOR327C 348 nt3.25□□□□□ -1.89
FIR1P40020 PSY2YNL201C 2577 nt3.25□□□□□ -1.89
FIR1P40020 UBP11YKR098C 2154 nt3.25□□□□□ -1.89
FIR1P40020 CAF120YNL278W 3183 nt3.24□□□□□ -1.89
FIR1P40020 CFT2YLR115W 2580 nt3.24□□□□□ -1.89
FIR1P40020 CIN8YEL061C 3003 nt3.24□□□□□ -1.89
FIR1P40020 snR74snR74 88 nt3.24□□□□□ -1.89
FIR1P40020 SPT4YGR063C 309 nt3.24□□□□□ -1.89
FIR1P40020 SEC5YDR166C 2916 nt3.24□□□□□ -1.89
FIR1P40020 IKI3YLR384C 4050 nt3.24□□□□□ -1.89
FIR1P40020 ECM21YBL101C 3354 nt3.23□□□□□ -1.89
FIR1P40020 UBP1YDL122W 2430 nt3.23□□□□□ -1.89
FIR1P40020 HRD3YLR207W 2502 nt3.23□□□□□ -1.89
FIR1P40020 VTC1YER072W 390 nt3.23□□□□□ -1.89
FIR1P40020 YAK1YJL141C 2424 nt3.23□□□□□ -1.89
FIR1P40020 LRE1YCL051W 1752 nt3.23□□□□□ -1.89
FIR1P40020 DSE4YNR067C 3354 nt3.22□□□□□ -1.89
FIR1P40020 EFR3YMR212C 2349 nt3.22□□□□□ -1.89
FIR1P40020 STE11YLR362W 2154 nt3.22□□□□□ -1.89
FIR1P40020 SPT21YMR179W 2277 nt3.22□□□□□ -1.89
FIR1P40020 ROG1YGL144C 2058 nt3.21□□□□□ -1.89
FIR1P40020 YDR464C-AYDR464C-A 189 nt3.21□□□□□ -1.9
FIR1P40020 snR43snR43 209 nt3.21□□□□□ -1.9
FIR1P40020 RGA2YDR379W 3030 nt3.21□□□□□ -1.9
FIR1P40020 ENA5YDR038C 3276 nt3.2□□□□□ -1.9
FIR1P40020 NOP10YHR072W-A 177 nt3.2□□□□□ -1.9
FIR1P40020 YOR381W-AYOR381W-A 168 nt3.2□□□□□ -1.9
FIR1P40020 SGF11YPL047W 300 nt3.2□□□□□ -1.9
FIR1P40020 YBR178WYBR178W 375 nt3.2□□□□□ -1.9
FIR1P40020 DNL4YOR005C 2835 nt3.2□□□□□ -1.9
FIR1P40020 MUK1YPL070W 1839 nt3.2□□□□□ -1.9
FIR1P40020 SQS1YNL224C 2304 nt3.2□□□□□ -1.9
FIR1P40020 CUL3YGR003W 2235 nt3.19□□□□□ -1.9
FIR1P40020 RPS27BYHR021C 249 nt3.19□□□□□ -1.9
FIR1P40020 MPT5YGL178W 2580 nt3.19□□□□□ -1.9
FIR1P40020 SEF1YBL066C 3447 nt3.19□□□□□ -1.9
FIR1P40020 YEL043WYEL043W 2871 nt3.18□□□□□ -1.9
FIR1P40020 YPR089WYPR089W 2667 nt3.18□□□□□ -1.9
FIR1P40020 SSQ1YLR369W 1974 nt3.18□□□□□ -1.9
FIR1P40020 PRP6YBR055C 2700 nt3.18□□□□□ -1.9
FIR1P40020 YSP2YDR326C 4317 nt3.18□□□□□ -1.9
FIR1P40020 KSP1YHR082C 3090 nt3.18□□□□□ -1.9
FIR1P40020 YFL065CYFL065C 309 nt3.18□□□□□ -1.9
FIR1P40020 VPS34YLR240W 2628 nt3.18□□□□□ -1.9
FIR1P40020 VPH1YOR270C 2523 nt3.18□□□□□ -1.9
FIR1P40020 INP2YMR163C 2118 nt3.17□□□□□ -1.9
FIR1P40020 PXA2YKL188C 2562 nt3.17□□□□□ -1.9
FIR1P40020 STT4YLR305C 5703 nt3.17□□□□□ -1.9
FIR1P40020 PFF1YBR074W 2931 nt3.17□□□□□ -1.9
FIR1P40020 YLR149CYLR149C 2193 nt3.17□□□□□ -1.9
FIR1P40020 BMS1YPL217C 3552 nt3.17□□□□□ -1.9
FIR1P40020 tQ(UUG)BtQ(UUG)B 72 nt3.17□□□□□ -1.9
FIR1P40020 YBR131C-AYBR131C-A 90 nt3.17□□□□□ -1.9
FIR1P40020 RGR1YLR071C 3249 nt3.17□□□□□ -1.9
FIR1P40020 PSK1YAL017W 4071 nt3.17□□□□□ -1.9
FIR1P40020 RSN1YMR266W 2862 nt3.16□□□□□ -1.9
FIR1P40020 SGS1YMR190C 4344 nt3.16□□□□□ -1.9
FIR1P40020 YBL065WYBL065W 345 nt3.15□□□□□ -1.91
FIR1P40020 GIS4YML006C 2325 nt3.15□□□□□ -1.91
FIR1P40020 YLR146W-AYLR146W-A 189 nt3.14□□□□□ -1.91
FIR1P40020 FMP16YDR070C 282 nt3.13□□□□□ -1.91
FIR1P40020 YOR161W-BYOR161W-B 261 nt3.13□□□□□ -1.91
FIR1P40020 PDR3YBL005W 2931 nt3.13□□□□□ -1.91
FIR1P40020 SPO14YKR031C 5052 nt3.13□□□□□ -1.91
FIR1P40020 POL2YNL262W 6669 nt3.13□□□□□ -1.91
FIR1P40020 GRR1YJR090C 3456 nt3.12□□□□□ -1.91
FIR1P40020 CHS2YBR038W 2892 nt3.12□□□□□ -1.91
FIR1P40020 snR52snR52 92 nt3.12□□□□□ -1.91
FIR1P40020 IRR1YIL026C 3453 nt3.12□□□□□ -1.91
FIR1P40020 SWA2YDR320C 2007 nt3.12□□□□□ -1.91
FIR1P40020 MMS22YLR320W 4365 nt3.12□□□□□ -1.91
FIR1P40020 AI2Q0055 2565 nt3.11□□□□□ -1.91
FIR1P40020 HEH2YDR458C 1992 nt3.11□□□□□ -1.91
FIR1P40020 tW(CCA)G1tW(CCA)G1 72 nt3.11□□□□□ -1.91
FIR1P40020 tW(CCA)G2tW(CCA)G2 72 nt3.11□□□□□ -1.91
FIR1P40020 tW(CCA)JtW(CCA)J 72 nt3.11□□□□□ -1.91
FIR1P40020 tW(CCA)KtW(CCA)K 72 nt3.11□□□□□ -1.91
FIR1P40020 tW(CCA)MtW(CCA)M 72 nt3.11□□□□□ -1.91
FIR1P40020 tW(CCA)PtW(CCA)P 72 nt3.11□□□□□ -1.91
FIR1P40020 YLR154C-HYLR154C-H 132 nt3.11□□□□□ -1.91
FIR1P40020 YLR156C-AYLR156C-A 132 nt3.11□□□□□ -1.91
FIR1P40020 YLR157C-CYLR157C-C 132 nt3.11□□□□□ -1.91
FIR1P40020 YLR159C-AYLR159C-A 132 nt3.11□□□□□ -1.91
FIR1P40020 NIP100YPL174C 2607 nt3.11□□□□□ -1.91
FIR1P40020 YBR184WYBR184W 1572 nt3.11□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 47.9 ms