Protein–RNA interactions for Protein: P0C2J7

TY4B-H, Transposon Ty4-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-HP0C2J7 YMR173W-AYMR173W-A 1185 nt0.43□□□□□ -2.34
TY4B-HP0C2J7 YNL179CYNL179C 438 nt0.43□□□□□ -2.34
TY4B-HP0C2J7 YDR261W-AYDR261W-A 1317 nt0.42□□□□□ -2.34
TY4B-HP0C2J7 SLS1YLR139C 1932 nt0.42□□□□□ -2.34
TY4B-HP0C2J7 SEC8YPR055W 3198 nt0.42□□□□□ -2.34
TY4B-HP0C2J7 YEL010WYEL010W 351 nt0.42□□□□□ -2.34
TY4B-HP0C2J7 MEI4YER044C-A 1227 nt0.42□□□□□ -2.34
TY4B-HP0C2J7 YKL115CYKL115C 393 nt0.42□□□□□ -2.34
TY4B-HP0C2J7 GRX8YLR364W 330 nt0.42□□□□□ -2.34
TY4B-HP0C2J7 CSE1YGL238W 2883 nt0.42□□□□□ -2.34
TY4B-HP0C2J7 AIM9YER080W 1884 nt0.41□□□□□ -2.34
TY4B-HP0C2J7 snR57snR57 88 nt0.41□□□□□ -2.34
TY4B-HP0C2J7 YDR199WYDR199W 366 nt0.41□□□□□ -2.34
TY4B-HP0C2J7 YFL012W-AYFL012W-A 375 nt0.41□□□□□ -2.34
TY4B-HP0C2J7 YNL171CYNL171C 369 nt0.41□□□□□ -2.34
TY4B-HP0C2J7 SWM2YNR004W 441 nt0.41□□□□□ -2.34
TY4B-HP0C2J7 SLU7YDR088C 1149 nt0.41□□□□□ -2.34
TY4B-HP0C2J7 RFA3YJL173C 369 nt0.41□□□□□ -2.34
TY4B-HP0C2J7 RCN1YKL159C 636 nt0.41□□□□□ -2.34
TY4B-HP0C2J7 RUF20RUF20 443 nt0.41□□□□□ -2.34
TY4B-HP0C2J7 RPS10BYMR230W 318 nt0.41□□□□□ -2.34
TY4B-HP0C2J7 OSH6YKR003W 1347 nt0.4□□□□□ -2.34
TY4B-HP0C2J7 KEG1YFR042W 603 nt0.4□□□□□ -2.35
TY4B-HP0C2J7 SVP26YHR181W 687 nt0.4□□□□□ -2.35
TY4B-HP0C2J7 YJL156W-AYJL156W-A 222 nt0.4□□□□□ -2.35
TY4B-HP0C2J7 BRX1YOL077C 876 nt0.4□□□□□ -2.35
TY4B-HP0C2J7 YOL085W-AYOL085W-A 213 nt0.4□□□□□ -2.35
TY4B-HP0C2J7 YBR062CYBR062C 543 nt0.4□□□□□ -2.35
TY4B-HP0C2J7 RRP15YPR143W 753 nt0.4□□□□□ -2.35
TY4B-HP0C2J7 YPR159C-AYPR159C-A 102 nt0.4□□□□□ -2.35
TY4B-HP0C2J7 IES5YER092W 378 nt0.39□□□□□ -2.35
TY4B-HP0C2J7 YJL032WYJL032W 315 nt0.39□□□□□ -2.35
TY4B-HP0C2J7 ICS2YBR157C 768 nt0.39□□□□□ -2.35
TY4B-HP0C2J7 GPX2YBR244W 489 nt0.39□□□□□ -2.35
TY4B-HP0C2J7 NUP120YKL057C 3114 nt0.39□□□□□ -2.35
TY4B-HP0C2J7 WAR1YML076C 2835 nt0.39□□□□□ -2.35
TY4B-HP0C2J7 YCR016WYCR016W 873 nt0.38□□□□□ -2.35
TY4B-HP0C2J7 PRM8YGL053W 714 nt0.38□□□□□ -2.35
TY4B-HP0C2J7 EMC5YIL027C 426 nt0.38□□□□□ -2.35
TY4B-HP0C2J7 RPC25YKL144C 639 nt0.38□□□□□ -2.35
TY4B-HP0C2J7 SWS2YNL081C 432 nt0.38□□□□□ -2.35
TY4B-HP0C2J7 IRC23YOR044W 474 nt0.38□□□□□ -2.35
TY4B-HP0C2J7 HHT1YBR010W 411 nt0.38□□□□□ -2.35
TY4B-HP0C2J7 GDS1YOR355W 1569 nt0.38□□□□□ -2.35
TY4B-HP0C2J7 LAG1YHL003C 1236 nt0.38□□□□□ -2.35
TY4B-HP0C2J7 YLL020CYLL020C 306 nt0.38□□□□□ -2.35
TY4B-HP0C2J7 ATP18YML081C-A 180 nt0.38□□□□□ -2.35
TY4B-HP0C2J7 GEP7YGL057C 864 nt0.37□□□□□ -2.35
TY4B-HP0C2J7 RPL38YLR325C 237 nt0.37□□□□□ -2.35
TY4B-HP0C2J7 IRC14YOR135C 342 nt0.37□□□□□ -2.35
TY4B-HP0C2J7 BI3Q0115 1554 nt0.37□□□□□ -2.35
TY4B-HP0C2J7 ABM1YJR108W 372 nt0.36□□□□□ -2.35
TY4B-HP0C2J7 CGI121YML036W 546 nt0.36□□□□□ -2.35
TY4B-HP0C2J7 SMB1YER029C 591 nt0.36□□□□□ -2.35
TY4B-HP0C2J7 YGR045CYGR045C 363 nt0.36□□□□□ -2.35
TY4B-HP0C2J7 YBR063CYBR063C 1215 nt0.36□□□□□ -2.35
TY4B-HP0C2J7 YLL007CYLL007C 1998 nt0.35□□□□□ -2.35
TY4B-HP0C2J7 SGO1YOR073W 1773 nt0.35□□□□□ -2.35
TY4B-HP0C2J7 RSM28YDR494W 1086 nt0.35□□□□□ -2.35
TY4B-HP0C2J7 IST3YIR005W 447 nt0.35□□□□□ -2.35
TY4B-HP0C2J7 PGA1YNL158W 597 nt0.35□□□□□ -2.35
TY4B-HP0C2J7 UFE1YOR075W 1041 nt0.35□□□□□ -2.35
TY4B-HP0C2J7 YBR200W-AYBR200W-A 165 nt0.35□□□□□ -2.35
TY4B-HP0C2J7 ERV15YBR210W 429 nt0.35□□□□□ -2.35
TY4B-HP0C2J7 NDD1YOR372C 1665 nt0.35□□□□□ -2.35
TY4B-HP0C2J7 PFS1YHR185C 714 nt0.34□□□□□ -2.35
TY4B-HP0C2J7 YIR020CYIR020C 303 nt0.34□□□□□ -2.35
TY4B-HP0C2J7 RPS16AYMR143W 432 nt0.34□□□□□ -2.36
TY4B-HP0C2J7 RPL9BYNL067W 576 nt0.34□□□□□ -2.36
TY4B-HP0C2J7 YOL024WYOL024W 519 nt0.34□□□□□ -2.36
TY4B-HP0C2J7 NOT5YPR072W 1683 nt0.34□□□□□ -2.36
TY4B-HP0C2J7 SEC5YDR166C 2916 nt0.33□□□□□ -2.36
TY4B-HP0C2J7 MZM1YDR493W 372 nt0.33□□□□□ -2.36
TY4B-HP0C2J7 ECM12YHR021W-A 456 nt0.33□□□□□ -2.36
TY4B-HP0C2J7 SWT1YOR166C 1377 nt0.32□□□□□ -2.36
TY4B-HP0C2J7 RTR1YER139C 681 nt0.32□□□□□ -2.36
TY4B-HP0C2J7 YER147C-AYER147C-A 411 nt0.32□□□□□ -2.36
TY4B-HP0C2J7 RAD6YGL058W 519 nt0.32□□□□□ -2.36
TY4B-HP0C2J7 EDC1YGL222C 528 nt0.32□□□□□ -2.36
TY4B-HP0C2J7 IMP3YHR148W 552 nt0.32□□□□□ -2.36
TY4B-HP0C2J7 SMD2YLR275W 333 nt0.32□□□□□ -2.36
TY4B-HP0C2J7 IZH4YOL101C 939 nt0.32□□□□□ -2.36
TY4B-HP0C2J7 IES4YOR189W 351 nt0.32□□□□□ -2.36
TY4B-HP0C2J7 PEP3YLR148W 2757 nt0.32□□□□□ -2.36
TY4B-HP0C2J7 YLL054CYLL054C 2532 nt0.32□□□□□ -2.36
TY4B-HP0C2J7 YGL109WYGL109W 324 nt0.31□□□□□ -2.36
TY4B-HP0C2J7 VMA7YGR020C 357 nt0.31□□□□□ -2.36
TY4B-HP0C2J7 BET4YJL031C 984 nt0.31□□□□□ -2.36
TY4B-HP0C2J7 DDR48YMR173W 1293 nt0.31□□□□□ -2.36
TY4B-HP0C2J7 snR45snR45 172 nt0.31□□□□□ -2.36
TY4B-HP0C2J7 LYS14YDR034C 2373 nt0.31□□□□□ -2.36
TY4B-HP0C2J7 RIM20YOR275C 1986 nt0.31□□□□□ -2.36
TY4B-HP0C2J7 YDL196WYDL196W 330 nt0.31□□□□□ -2.36
TY4B-HP0C2J7 YJL026C-AYJL026C-A 222 nt0.31□□□□□ -2.36
TY4B-HP0C2J7 snR24snR24 89 nt0.31□□□□□ -2.36
TY4B-HP0C2J7 SPT21YMR179W 2277 nt0.3□□□□□ -2.36
TY4B-HP0C2J7 YDR248CYDR248C 582 nt0.3□□□□□ -2.36
TY4B-HP0C2J7 SEC22YLR268W 645 nt0.3□□□□□ -2.36
TY4B-HP0C2J7 YPL034WYPL034W 498 nt0.3□□□□□ -2.36
TY4B-HP0C2J7 PET20YPL159C 762 nt0.3□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 7.7 ms