Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11236J3QMS7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11236J3QMS7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11236J3QMS7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Gm11236J3QMS7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11236J3QMS7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11236J3QMS7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.43■□□□□ 0.54
Gm11236J3QMS7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11236J3QMS7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11236J3QMS7 Idnk-204ENSMUST00000226010 1898 ntBASIC18.43■□□□□ 0.54
Gm11236J3QMS7 Golph3-205ENSMUST00000228671 2842 ntBASIC18.43■□□□□ 0.54
Gm11236J3QMS7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11236J3QMS7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11236J3QMS7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11236J3QMS7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Gm11236J3QMS7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11236J3QMS7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11236J3QMS7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.42■□□□□ 0.54
Gm11236J3QMS7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.42■□□□□ 0.54
Gm11236J3QMS7 Gm7213-201ENSMUST00000215977 950 ntBASIC18.42■□□□□ 0.54
Gm11236J3QMS7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11236J3QMS7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11236J3QMS7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11236J3QMS7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11236J3QMS7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.42■□□□□ 0.54
Gm11236J3QMS7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11236J3QMS7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11236J3QMS7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Gm11236J3QMS7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11236J3QMS7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Gm11236J3QMS7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11236J3QMS7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11236J3QMS7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Gm11236J3QMS7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11236J3QMS7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
Gm11236J3QMS7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Gm11236J3QMS7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Gm11236J3QMS7 Gm14859-201ENSMUST00000117752 357 ntBASIC18.4■□□□□ 0.54
Gm11236J3QMS7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11236J3QMS7 Mir8112-201ENSMUST00000184382 131 ntBASIC18.4■□□□□ 0.54
Gm11236J3QMS7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11236J3QMS7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11236J3QMS7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11236J3QMS7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11236J3QMS7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11236J3QMS7 Fst-202ENSMUST00000223640 2612 ntBASIC18.39■□□□□ 0.54
Gm11236J3QMS7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gm11236J3QMS7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm11236J3QMS7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm11236J3QMS7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.39■□□□□ 0.53
Gm11236J3QMS7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm11236J3QMS7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm11236J3QMS7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11236J3QMS7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Gm11236J3QMS7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm11236J3QMS7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm11236J3QMS7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm11236J3QMS7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms