Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 TFC8YPL007C 1767 nt1.39□□□□□ -2.19
RRP40Q08285 MSH6YDR097C 3729 nt1.39□□□□□ -2.19
RRP40Q08285 GNT1YOR320C 1476 nt1.38□□□□□ -2.19
RRP40Q08285 ADR1YDR216W 3972 nt1.38□□□□□ -2.19
RRP40Q08285 KCS1YDR017C 3153 nt1.38□□□□□ -2.19
RRP40Q08285 TRX1YLR043C 312 nt1.38□□□□□ -2.19
RRP40Q08285 SEC22YLR268W 645 nt1.38□□□□□ -2.19
RRP40Q08285 ATP20YPR020W 348 nt1.38□□□□□ -2.19
RRP40Q08285 LYS9YNR050C 1341 nt1.38□□□□□ -2.19
RRP40Q08285 FYV8YGR196C 2454 nt1.37□□□□□ -2.19
RRP40Q08285 tQ(UUG)E2tQ(UUG)E2 72 nt1.37□□□□□ -2.19
RRP40Q08285 GIC1YHR061C 945 nt1.37□□□□□ -2.19
RRP40Q08285 RPL37AYLR185W 267 nt1.37□□□□□ -2.19
RRP40Q08285 YMR254CYMR254C 309 nt1.37□□□□□ -2.19
RRP40Q08285 YPR096CYPR096C 303 nt1.37□□□□□ -2.19
RRP40Q08285 GPX2YBR244W 489 nt1.37□□□□□ -2.19
RRP40Q08285 MDM20YOL076W 2391 nt1.37□□□□□ -2.19
RRP40Q08285 DAS1YJL149W 1992 nt1.37□□□□□ -2.19
RRP40Q08285 ASM4YDL088C 1587 nt1.37□□□□□ -2.19
RRP40Q08285 ZRG8YER033C 3231 nt1.37□□□□□ -2.19
RRP40Q08285 YNL284C-BYNL284C-B 5268 nt1.37□□□□□ -2.19
RRP40Q08285 TIF11YMR260C 462 nt1.36□□□□□ -2.19
RRP40Q08285 CMC2YBL059C-A 330 nt1.36□□□□□ -2.19
RRP40Q08285 PGA1YNL158W 597 nt1.36□□□□□ -2.19
RRP40Q08285 YBL083CYBL083C 426 nt1.36□□□□□ -2.19
RRP40Q08285 SEY1YOR165W 2331 nt1.36□□□□□ -2.19
RRP40Q08285 CSM4YPL200W 471 nt1.36□□□□□ -2.19
RRP40Q08285 SPO24YPR036W-A 204 nt1.36□□□□□ -2.19
RRP40Q08285 MAD1YGL086W 2250 nt1.36□□□□□ -2.19
RRP40Q08285 PMD1YER132C 5262 nt1.36□□□□□ -2.19
RRP40Q08285 BI4Q0120 1917 nt1.35□□□□□ -2.19
RRP40Q08285 RTR2YDR066C 591 nt1.35□□□□□ -2.19
RRP40Q08285 YDR461C-AYDR461C-A 243 nt1.35□□□□□ -2.19
RRP40Q08285 YER088C-AYER088C-A 324 nt1.35□□□□□ -2.19
RRP40Q08285 SCEIQ0160 708 nt1.35□□□□□ -2.19
RRP40Q08285 YOL029CYOL029C 606 nt1.35□□□□□ -2.19
RRP40Q08285 YLR149CYLR149C 2193 nt1.35□□□□□ -2.19
RRP40Q08285 NOT5YPR072W 1683 nt1.35□□□□□ -2.19
RRP40Q08285 SWT1YOR166C 1377 nt1.34□□□□□ -2.19
RRP40Q08285 MSH3YCR092C 3057 nt1.34□□□□□ -2.19
RRP40Q08285 SPC98YNL126W 2541 nt1.34□□□□□ -2.19
RRP40Q08285 MNL2YLR057W 2550 nt1.34□□□□□ -2.19
RRP40Q08285 YCR102W-AYCR102W-A 198 nt1.34□□□□□ -2.19
RRP40Q08285 YJR140W-AYJR140W-A 150 nt1.34□□□□□ -2.19
RRP40Q08285 YNL146C-AYNL146C-A 195 nt1.34□□□□□ -2.19
RRP40Q08285 YBR224WYBR224W 516 nt1.34□□□□□ -2.19
RRP40Q08285 DOT6YER088C 2013 nt1.33□□□□□ -2.2
RRP40Q08285 SKI3YPR189W 4299 nt1.33□□□□□ -2.2
RRP40Q08285 YCR043CYCR043C 384 nt1.33□□□□□ -2.2
RRP40Q08285 SNO3YFL060C 669 nt1.33□□□□□ -2.2
RRP40Q08285 YGL015CYGL015C 393 nt1.33□□□□□ -2.2
RRP40Q08285 TIM10YHR005C-A 282 nt1.33□□□□□ -2.2
RRP40Q08285 SEN15YMR059W 387 nt1.33□□□□□ -2.2
RRP40Q08285 SNO2YNL334C 669 nt1.33□□□□□ -2.2
RRP40Q08285 LAA1YJL207C 6045 nt1.33□□□□□ -2.2
RRP40Q08285 GPM2YDL021W 936 nt1.32□□□□□ -2.2
RRP40Q08285 YDL187CYDL187C 330 nt1.32□□□□□ -2.2
RRP40Q08285 YJR087WYJR087W 351 nt1.32□□□□□ -2.2
RRP40Q08285 YLR271WYLR271W 825 nt1.32□□□□□ -2.2
RRP40Q08285 PET123YOR158W 957 nt1.32□□□□□ -2.2
RRP40Q08285 CTF4YPR135W 2784 nt1.32□□□□□ -2.2
RRP40Q08285 NOP53YPL146C 1368 nt1.32□□□□□ -2.2
RRP40Q08285 YGR250CYGR250C 2346 nt1.32□□□□□ -2.2
RRP40Q08285 MSC6YOR354C 2079 nt1.31□□□□□ -2.2
RRP40Q08285 SXM1YDR395W 2835 nt1.31□□□□□ -2.2
RRP40Q08285 KAR3YPR141C 2190 nt1.31□□□□□ -2.2
RRP40Q08285 SLX9YGR081C 633 nt1.31□□□□□ -2.2
RRP40Q08285 YIR020CYIR020C 303 nt1.31□□□□□ -2.2
RRP40Q08285 YPL197CYPL197C 414 nt1.31□□□□□ -2.2
RRP40Q08285 YSW1YBR148W 1830 nt1.31□□□□□ -2.2
RRP40Q08285 YLR419WYLR419W 4308 nt1.31□□□□□ -2.2
RRP40Q08285 SGD1YLR336C 2700 nt1.31□□□□□ -2.2
RRP40Q08285 HMI1YOL095C 2121 nt1.3□□□□□ -2.2
RRP40Q08285 LSO2YGR169C-A 279 nt1.3□□□□□ -2.2
RRP40Q08285 LRP1YHR081W 555 nt1.3□□□□□ -2.2
RRP40Q08285 PRP21YJL203W 843 nt1.3□□□□□ -2.2
RRP40Q08285 YPR147CYPR147C 915 nt1.3□□□□□ -2.2
RRP40Q08285 BUD3YCL014W 4911 nt1.3□□□□□ -2.2
RRP40Q08285 PEP3YLR148W 2757 nt1.29□□□□□ -2.2
RRP40Q08285 YDL041WYDL041W 354 nt1.29□□□□□ -2.2
RRP40Q08285 YEL018C-AYEL018C-A 534 nt1.29□□□□□ -2.2
RRP40Q08285 AFR1YDR085C 1863 nt1.29□□□□□ -2.2
RRP40Q08285 VPS52YDR484W 1926 nt1.28□□□□□ -2.2
RRP40Q08285 PIK1YNL267W 3201 nt1.28□□□□□ -2.2
RRP40Q08285 IES5YER092W 378 nt1.28□□□□□ -2.2
RRP40Q08285 YER175W-AYER175W-A 165 nt1.28□□□□□ -2.2
RRP40Q08285 YHR214W-AYHR214W-A 486 nt1.28□□□□□ -2.2
RRP40Q08285 MCM22YJR135C 720 nt1.28□□□□□ -2.2
RRP40Q08285 IRC19YLL033W 693 nt1.28□□□□□ -2.2
RRP40Q08285 YAR068WYAR068W 486 nt1.28□□□□□ -2.2
RRP40Q08285 CGI121YML036W 546 nt1.28□□□□□ -2.2
RRP40Q08285 YNL319WYNL319W 441 nt1.28□□□□□ -2.2
RRP40Q08285 COX1Q0045 1605 nt1.28□□□□□ -2.2
RRP40Q08285 UTP13YLR222C 2454 nt1.28□□□□□ -2.2
RRP40Q08285 SEC21YNL287W 2808 nt1.28□□□□□ -2.2
RRP40Q08285 IRE1YHR079C 3348 nt1.28□□□□□ -2.21
RRP40Q08285 tH(GUG)E1tH(GUG)E1 72 nt1.27□□□□□ -2.21
RRP40Q08285 tH(GUG)E2tH(GUG)E2 72 nt1.27□□□□□ -2.21
RRP40Q08285 tH(GUG)G1tH(GUG)G1 72 nt1.27□□□□□ -2.21
RRP40Q08285 tH(GUG)G2tH(GUG)G2 72 nt1.27□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 41.6 ms