Protein–RNA interactions for Protein: Q06217

SMD2, Small nuclear ribonucleoprotein Sm D2, yeastyeast

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD2Q06217 YEL010WYEL010W 351 nt0.93□□□□□ -2.26
SMD2Q06217 SWM2YNR004W 441 nt0.93□□□□□ -2.26
SMD2Q06217 TIM18YOR297C 579 nt0.93□□□□□ -2.26
SMD2Q06217 FMP23YBR047W 528 nt0.93□□□□□ -2.26
SMD2Q06217 BRO1YPL084W 2535 nt0.92□□□□□ -2.26
SMD2Q06217 YAR009CYAR009C 3591 nt0.92□□□□□ -2.26
SMD2Q06217 RSM28YDR494W 1086 nt0.92□□□□□ -2.26
SMD2Q06217 YNR068CYNR068C 819 nt0.92□□□□□ -2.26
SMD2Q06217 snR14snR14 160 nt0.92□□□□□ -2.26
SMD2Q06217 GPM2YDL021W 936 nt0.91□□□□□ -2.26
SMD2Q06217 OST5YGL226C-A 261 nt0.91□□□□□ -2.26
SMD2Q06217 YJL127C-BYJL127C-B 159 nt0.91□□□□□ -2.26
SMD2Q06217 YAL064WYAL064W 285 nt0.91□□□□□ -2.26
SMD2Q06217 YDR261W-AYDR261W-A 1317 nt0.9□□□□□ -2.26
SMD2Q06217 LAG1YHL003C 1236 nt0.9□□□□□ -2.27
SMD2Q06217 SPC24YMR117C 642 nt0.9□□□□□ -2.27
SMD2Q06217 PAI3YMR174C 207 nt0.9□□□□□ -2.27
SMD2Q06217 IRC14YOR135C 342 nt0.9□□□□□ -2.27
SMD2Q06217 DOP1YDR141C 5097 nt0.9□□□□□ -2.27
SMD2Q06217 INA22YIR024C 651 nt0.89□□□□□ -2.27
SMD2Q06217 YML009C-AYML009C-A 327 nt0.89□□□□□ -2.27
SMD2Q06217 ATP18YML081C-A 180 nt0.89□□□□□ -2.27
SMD2Q06217 YBL083CYBL083C 426 nt0.89□□□□□ -2.27
SMD2Q06217 NUP188YML103C 4968 nt0.88□□□□□ -2.27
SMD2Q06217 NOT5YPR072W 1683 nt0.88□□□□□ -2.27
SMD2Q06217 VPS54YDR027C 2670 nt0.88□□□□□ -2.27
SMD2Q06217 YCR016WYCR016W 873 nt0.88□□□□□ -2.27
SMD2Q06217 NBL1YHR199C-A 222 nt0.88□□□□□ -2.27
SMD2Q06217 YIL142C-AYIL142C-A 333 nt0.87□□□□□ -2.27
SMD2Q06217 YKL183C-AYKL183C-A 213 nt0.87□□□□□ -2.27
SMD2Q06217 URA10YMR271C 684 nt0.87□□□□□ -2.27
SMD2Q06217 SWI4YER111C 3282 nt0.86□□□□□ -2.27
SMD2Q06217 SMC1YFL008W 3678 nt0.86□□□□□ -2.27
SMD2Q06217 LSM4YER112W 564 nt0.86□□□□□ -2.27
SMD2Q06217 YNL284C-BYNL284C-B 5268 nt0.86□□□□□ -2.27
SMD2Q06217 OSH6YKR003W 1347 nt0.86□□□□□ -2.27
SMD2Q06217 SEC1YDR164C 2175 nt0.86□□□□□ -2.27
SMD2Q06217 RAD50YNL250W 3939 nt0.85□□□□□ -2.27
SMD2Q06217 NUP145YGL092W 3954 nt0.85□□□□□ -2.27
SMD2Q06217 SHS1YDL225W 1656 nt0.85□□□□□ -2.27
SMD2Q06217 RPL9BYNL067W 576 nt0.85□□□□□ -2.27
SMD2Q06217 KAR9YPL269W 1935 nt0.84□□□□□ -2.27
SMD2Q06217 SGO1YOR073W 1773 nt0.84□□□□□ -2.27
SMD2Q06217 RPL40BYKR094C 387 nt0.84□□□□□ -2.27
SMD2Q06217 RPS16AYMR143W 432 nt0.84□□□□□ -2.27
SMD2Q06217 YBR051WYBR051W 351 nt0.84□□□□□ -2.27
SMD2Q06217 NHP2YDL208W 471 nt0.83□□□□□ -2.28
SMD2Q06217 VMA7YGR020C 357 nt0.83□□□□□ -2.28
SMD2Q06217 THG1YGR024C 714 nt0.83□□□□□ -2.28
SMD2Q06217 SLX9YGR081C 633 nt0.83□□□□□ -2.28
SMD2Q06217 YAP3YHL009C 993 nt0.83□□□□□ -2.28
SMD2Q06217 CGI121YML036W 546 nt0.83□□□□□ -2.28
SMD2Q06217 SWS2YNL081C 432 nt0.83□□□□□ -2.28
SMD2Q06217 YOL118CYOL118C 309 nt0.83□□□□□ -2.28
SMD2Q06217 YOR072W-AYOR072W-A 249 nt0.83□□□□□ -2.28
SMD2Q06217 YGL217CYGL217C 342 nt0.82□□□□□ -2.28
SMD2Q06217 YGR242WYGR242W 309 nt0.82□□□□□ -2.28
SMD2Q06217 HTD2YHR067W 843 nt0.82□□□□□ -2.28
SMD2Q06217 BET4YJL031C 984 nt0.82□□□□□ -2.28
SMD2Q06217 ABM1YJR108W 372 nt0.82□□□□□ -2.28
SMD2Q06217 YBL073WYBL073W 312 nt0.82□□□□□ -2.28
SMD2Q06217 YOR105WYOR105W 327 nt0.82□□□□□ -2.28
SMD2Q06217 PET20YPL159C 762 nt0.82□□□□□ -2.28
SMD2Q06217 YPR159C-AYPR159C-A 102 nt0.82□□□□□ -2.28
SMD2Q06217 SLX4YLR135W 2247 nt0.82□□□□□ -2.28
SMD2Q06217 YJR003CYJR003C 1560 nt0.82□□□□□ -2.28
SMD2Q06217 LST4YKL176C 2487 nt0.81□□□□□ -2.28
SMD2Q06217 RIM20YOR275C 1986 nt0.81□□□□□ -2.28
SMD2Q06217 RTR1YER139C 681 nt0.81□□□□□ -2.28
SMD2Q06217 YIR020CYIR020C 303 nt0.81□□□□□ -2.28
SMD2Q06217 RFA3YJL173C 369 nt0.81□□□□□ -2.28
SMD2Q06217 YBL029C-AYBL029C-A 285 nt0.81□□□□□ -2.28
SMD2Q06217 YOR020W-AYOR020W-A 273 nt0.81□□□□□ -2.28
SMD2Q06217 YBR224WYBR224W 516 nt0.81□□□□□ -2.28
SMD2Q06217 YCS4YLR272C 3531 nt0.8□□□□□ -2.28
SMD2Q06217 APL3YBL037W 3078 nt0.8□□□□□ -2.28
SMD2Q06217 YDR521WYDR521W 336 nt0.8□□□□□ -2.28
SMD2Q06217 CMC4YMR194C-B 222 nt0.8□□□□□ -2.28
SMD2Q06217 PHO80YOL001W 882 nt0.8□□□□□ -2.28
SMD2Q06217 YPL034WYPL034W 498 nt0.8□□□□□ -2.28
SMD2Q06217 YPR117WYPR117W 7470 nt0.79□□□□□ -2.28
SMD2Q06217 RSM18YER050C 417 nt0.79□□□□□ -2.28
SMD2Q06217 EDC1YGL222C 528 nt0.79□□□□□ -2.28
SMD2Q06217 YLR031WYLR031W 561 nt0.79□□□□□ -2.28
SMD2Q06217 IRC23YOR044W 474 nt0.79□□□□□ -2.28
SMD2Q06217 IRC13YOR235W 315 nt0.79□□□□□ -2.28
SMD2Q06217 YJR029WYJR029W 5268 nt0.79□□□□□ -2.28
SMD2Q06217 YPR137C-BYPR137C-B 5268 nt0.79□□□□□ -2.28
SMD2Q06217 PEP3YLR148W 2757 nt0.79□□□□□ -2.28
SMD2Q06217 COG4YPR105C 2586 nt0.78□□□□□ -2.28
SMD2Q06217 YER023C-AYER023C-A 213 nt0.78□□□□□ -2.28
SMD2Q06217 YGR265WYGR265W 411 nt0.78□□□□□ -2.28
SMD2Q06217 RPL16AYIL133C 600 nt0.78□□□□□ -2.28
SMD2Q06217 HYM1YKL189W 1200 nt0.78□□□□□ -2.28
SMD2Q06217 NUP157YER105C 4176 nt0.78□□□□□ -2.29
SMD2Q06217 SPT21YMR179W 2277 nt0.77□□□□□ -2.29
SMD2Q06217 UTP13YLR222C 2454 nt0.77□□□□□ -2.29
SMD2Q06217 BTN2YGR142W 1233 nt0.77□□□□□ -2.29
SMD2Q06217 tT(AGU)BtT(AGU)B 73 nt0.77□□□□□ -2.29
SMD2Q06217 tT(AGU)CtT(AGU)C 73 nt0.77□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 30.6 ms