Protein–RNA interactions for Protein: Q03612

TY1B-ER1, Transposon Ty1-ER1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-ER1Q03612 RPB5YBR154C 648 nt0.27□□□□□ -2.37
TY1B-ER1Q03612 SMY1YKL079W 1971 nt0.26□□□□□ -2.37
TY1B-ER1Q03612 snR68snR68 136 nt0.26□□□□□ -2.37
TY1B-ER1Q03612 YGL039WYGL039W 1047 nt0.26□□□□□ -2.37
TY1B-ER1Q03612 YIL012WYIL012W 342 nt0.26□□□□□ -2.37
TY1B-ER1Q03612 UAF30YOR295W 687 nt0.26□□□□□ -2.37
TY1B-ER1Q03612 snR35snR35 204 nt0.26□□□□□ -2.37
TY1B-ER1Q03612 COF1YLL050C 432 nt0.25□□□□□ -2.37
TY1B-ER1Q03612 SWT1YOR166C 1377 nt0.25□□□□□ -2.37
TY1B-ER1Q03612 DAS1YJL149W 1992 nt0.25□□□□□ -2.37
TY1B-ER1Q03612 MEI4YER044C-A 1227 nt0.24□□□□□ -2.37
TY1B-ER1Q03612 SWS2YNL081C 432 nt0.24□□□□□ -2.37
TY1B-ER1Q03612 PSO2YMR137C 1986 nt0.24□□□□□ -2.37
TY1B-ER1Q03612 RPL40BYKR094C 387 nt0.24□□□□□ -2.37
TY1B-ER1Q03612 FMP23YBR047W 528 nt0.24□□□□□ -2.37
TY1B-ER1Q03612 YPL135C-AYPL135C-A 174 nt0.24□□□□□ -2.37
TY1B-ER1Q03612 BFR1YOR198C 1413 nt0.23□□□□□ -2.37
TY1B-ER1Q03612 YFR054CYFR054C 579 nt0.23□□□□□ -2.37
TY1B-ER1Q03612 YGL109WYGL109W 324 nt0.23□□□□□ -2.37
TY1B-ER1Q03612 MSC6YOR354C 2079 nt0.23□□□□□ -2.37
TY1B-ER1Q03612 YDL157CYDL157C 357 nt0.22□□□□□ -2.37
TY1B-ER1Q03612 YOR376WYOR376W 369 nt0.22□□□□□ -2.37
TY1B-ER1Q03612 SFM1YOR021C 642 nt0.22□□□□□ -2.37
TY1B-ER1Q03612 GRX7YBR014C 612 nt0.22□□□□□ -2.37
TY1B-ER1Q03612 RIM20YOR275C 1986 nt0.21□□□□□ -2.38
TY1B-ER1Q03612 GDS1YOR355W 1569 nt0.21□□□□□ -2.38
TY1B-ER1Q03612 YDR381C-AYDR381C-A 345 nt0.21□□□□□ -2.38
TY1B-ER1Q03612 RPI1YIL119C 1224 nt0.21□□□□□ -2.38
TY1B-ER1Q03612 REX3YLR107W 1215 nt0.21□□□□□ -2.38
TY1B-ER1Q03612 snR13snR13 124 nt0.21□□□□□ -2.38
TY1B-ER1Q03612 AHC2YCR082W 387 nt0.2□□□□□ -2.38
TY1B-ER1Q03612 PCL2YDL127W 927 nt0.2□□□□□ -2.38
TY1B-ER1Q03612 MZM1YDR493W 372 nt0.2□□□□□ -2.38
TY1B-ER1Q03612 YNL089CYNL089C 477 nt0.2□□□□□ -2.38
TY1B-ER1Q03612 YNL226WYNL226W 411 nt0.2□□□□□ -2.38
TY1B-ER1Q03612 MRPL50YNR022C 420 nt0.2□□□□□ -2.38
TY1B-ER1Q03612 YOR053WYOR053W 342 nt0.2□□□□□ -2.38
TY1B-ER1Q03612 SLX4YLR135W 2247 nt0.2□□□□□ -2.38
TY1B-ER1Q03612 NOP10YHR072W-A 177 nt0.19□□□□□ -2.38
TY1B-ER1Q03612 RAD10YML095C 633 nt0.19□□□□□ -2.38
TY1B-ER1Q03612 IRC23YOR044W 474 nt0.19□□□□□ -2.38
TY1B-ER1Q03612 YIM2YMR151W 438 nt0.19□□□□□ -2.38
TY1B-ER1Q03612 YBL094CYBL094C 333 nt0.19□□□□□ -2.38
TY1B-ER1Q03612 TAD1YGL243W 1203 nt0.18□□□□□ -2.38
TY1B-ER1Q03612 NME1NME1 340 nt0.18□□□□□ -2.38
TY1B-ER1Q03612 HHT1YBR010W 411 nt0.18□□□□□ -2.38
TY1B-ER1Q03612 TCA17YEL048C 459 nt0.17□□□□□ -2.38
TY1B-ER1Q03612 YGR045CYGR045C 363 nt0.17□□□□□ -2.38
TY1B-ER1Q03612 LAG1YHL003C 1236 nt0.17□□□□□ -2.38
TY1B-ER1Q03612 IES4YOR189W 351 nt0.17□□□□□ -2.38
TY1B-ER1Q03612 RRP15YPR143W 753 nt0.17□□□□□ -2.38
TY1B-ER1Q03612 BFA1YJR053W 1725 nt0.17□□□□□ -2.38
TY1B-ER1Q03612 FAR7YFR008W 666 nt0.17□□□□□ -2.38
TY1B-ER1Q03612 VMA7YGR020C 357 nt0.17□□□□□ -2.38
TY1B-ER1Q03612 GIC1YHR061C 945 nt0.17□□□□□ -2.38
TY1B-ER1Q03612 GMC2YLR445W 567 nt0.17□□□□□ -2.38
TY1B-ER1Q03612 SPC2YML055W 537 nt0.17□□□□□ -2.38
TY1B-ER1Q03612 MIX23YBL107C 591 nt0.17□□□□□ -2.38
TY1B-ER1Q03612 MDM36YPR083W 1740 nt0.16□□□□□ -2.38
TY1B-ER1Q03612 KEG1YFR042W 603 nt0.16□□□□□ -2.38
TY1B-ER1Q03612 BNS1YGR230W 414 nt0.16□□□□□ -2.38
TY1B-ER1Q03612 YJL127C-BYJL127C-B 159 nt0.16□□□□□ -2.38
TY1B-ER1Q03612 TIF11YMR260C 462 nt0.16□□□□□ -2.38
TY1B-ER1Q03612 PEX15YOL044W 1152 nt0.16□□□□□ -2.38
TY1B-ER1Q03612 AI3Q0060 1248 nt0.15□□□□□ -2.39
TY1B-ER1Q03612 YBR200W-AYBR200W-A 165 nt0.15□□□□□ -2.39
TY1B-ER1Q03612 AME1YBR211C 975 nt0.15□□□□□ -2.39
TY1B-ER1Q03612 MXR1YER042W 555 nt0.14□□□□□ -2.39
TY1B-ER1Q03612 EMC5YIL027C 426 nt0.14□□□□□ -2.39
TY1B-ER1Q03612 YMR147WYMR147W 672 nt0.14□□□□□ -2.39
TY1B-ER1Q03612 RRT16YNL105W 429 nt0.14□□□□□ -2.39
TY1B-ER1Q03612 MLP1YKR095W 5628 nt0.14□□□□□ -2.39
TY1B-ER1Q03612 SGO1YOR073W 1773 nt0.14□□□□□ -2.39
TY1B-ER1Q03612 YFL041W-AYFL041W-A 192 nt0.14□□□□□ -2.39
TY1B-ER1Q03612 YIL030W-AYIL030W-A 339 nt0.14□□□□□ -2.39
TY1B-ER1Q03612 RPS24BYIL069C 408 nt0.14□□□□□ -2.39
TY1B-ER1Q03612 YIR020CYIR020C 303 nt0.14□□□□□ -2.39
TY1B-ER1Q03612 YPR014CYPR014C 330 nt0.14□□□□□ -2.39
TY1B-ER1Q03612 SPT21YMR179W 2277 nt0.13□□□□□ -2.39
TY1B-ER1Q03612 ECM25YJL201W 1800 nt0.13□□□□□ -2.39
TY1B-ER1Q03612 YDL025W-AYDL025W-A 105 nt0.12□□□□□ -2.39
TY1B-ER1Q03612 YER147C-AYER147C-A 411 nt0.12□□□□□ -2.39
TY1B-ER1Q03612 YIL089WYIL089W 618 nt0.12□□□□□ -2.39
TY1B-ER1Q03612 GLG1YKR058W 1851 nt0.12□□□□□ -2.39
TY1B-ER1Q03612 BRX1YOL077C 876 nt0.12□□□□□ -2.39
TY1B-ER1Q03612 YBR224WYBR224W 516 nt0.12□□□□□ -2.39
TY1B-ER1Q03612 PEX34YCL056C 435 nt0.12□□□□□ -2.39
TY1B-ER1Q03612 MFA1YDR461W 111 nt0.11□□□□□ -2.39
TY1B-ER1Q03612 YGL217CYGL217C 342 nt0.11□□□□□ -2.39
TY1B-ER1Q03612 YLR402WYLR402W 192 nt0.11□□□□□ -2.39
TY1B-ER1Q03612 YLR458WYLR458W 381 nt0.11□□□□□ -2.39
TY1B-ER1Q03612 ABF2YMR072W 552 nt0.11□□□□□ -2.39
TY1B-ER1Q03612 NOP12YOL041C 1380 nt0.11□□□□□ -2.39
TY1B-ER1Q03612 YDL196WYDL196W 330 nt0.11□□□□□ -2.39
TY1B-ER1Q03612 ULI1YFR026C 510 nt0.11□□□□□ -2.39
TY1B-ER1Q03612 VPS25YJR102C 609 nt0.11□□□□□ -2.39
TY1B-ER1Q03612 SGD1YLR336C 2700 nt0.11□□□□□ -2.39
TY1B-ER1Q03612 HDA3YPR179C 1968 nt0.11□□□□□ -2.39
TY1B-ER1Q03612 FUS2YMR232W 2034 nt0.1□□□□□ -2.39
TY1B-ER1Q03612 UTP10YJL109C 5310 nt0.1□□□□□ -2.39
Retrieved 100 of 7,029 protein–RNA pairs in 95.3 ms