Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 SGD1YLR336C 2700 nt2.09□□□□□ -2.07
RPA49Q01080 NEO1YIL048W 3456 nt2.09□□□□□ -2.07
RPA49Q01080 snR79snR79 84 nt2.09□□□□□ -2.07
RPA49Q01080 ATP17YDR377W 306 nt2.09□□□□□ -2.07
RPA49Q01080 YEL030C-AYEL030C-A 315 nt2.09□□□□□ -2.07
RPA49Q01080 LSO2YGR169C-A 279 nt2.09□□□□□ -2.07
RPA49Q01080 YHR125WYHR125W 306 nt2.09□□□□□ -2.07
RPA49Q01080 SPC29YPL124W 762 nt2.09□□□□□ -2.07
RPA49Q01080 snR54snR54 86 nt2.09□□□□□ -2.07
RPA49Q01080 YSW1YBR148W 1830 nt2.09□□□□□ -2.08
RPA49Q01080 YMR045CYMR045C 5268 nt2.09□□□□□ -2.08
RPA49Q01080 MCD1YDL003W 1701 nt2.08□□□□□ -2.08
RPA49Q01080 RUD3YOR216C 1455 nt2.08□□□□□ -2.08
RPA49Q01080 VPS35YJL154C 2835 nt2.08□□□□□ -2.08
RPA49Q01080 YCR001WYCR001W 315 nt2.08□□□□□ -2.08
RPA49Q01080 IES5YER092W 378 nt2.08□□□□□ -2.08
RPA49Q01080 AIM29YKR074W 468 nt2.08□□□□□ -2.08
RPA49Q01080 SYM1YLR251W 594 nt2.08□□□□□ -2.08
RPA49Q01080 YBL012CYBL012C 402 nt2.08□□□□□ -2.08
RPA49Q01080 YMR052C-AYMR052C-A 366 nt2.08□□□□□ -2.08
RPA49Q01080 YOR032W-AYOR032W-A 201 nt2.08□□□□□ -2.08
RPA49Q01080 RGA1YOR127W 3024 nt2.08□□□□□ -2.08
RPA49Q01080 TUS1YLR425W 3924 nt2.07□□□□□ -2.08
RPA49Q01080 NOP14YDL148C 2433 nt2.07□□□□□ -2.08
RPA49Q01080 RVS161YCR009C 798 nt2.07□□□□□ -2.08
RPA49Q01080 YJL007CYJL007C 315 nt2.07□□□□□ -2.08
RPA49Q01080 YKR075W-AYKR075W-A 270 nt2.07□□□□□ -2.08
RPA49Q01080 YLR269CYLR269C 351 nt2.07□□□□□ -2.08
RPA49Q01080 VPS20YMR077C 666 nt2.07□□□□□ -2.08
RPA49Q01080 snR13snR13 124 nt2.07□□□□□ -2.08
RPA49Q01080 GPX2YBR244W 489 nt2.07□□□□□ -2.08
RPA49Q01080 SET2YJL168C 2202 nt2.07□□□□□ -2.08
RPA49Q01080 CDC27YBL084C 2277 nt2.07□□□□□ -2.08
RPA49Q01080 PET309YLR067C 2898 nt2.07□□□□□ -2.08
RPA49Q01080 UBP2YOR124C 3819 nt2.06□□□□□ -2.08
RPA49Q01080 YDR286CYDR286C 345 nt2.06□□□□□ -2.08
RPA49Q01080 NBL1YHR199C-A 222 nt2.06□□□□□ -2.08
RPA49Q01080 VPS8YAL002W 3825 nt2.06□□□□□ -2.08
RPA49Q01080 snR41snR41 95 nt2.06□□□□□ -2.08
RPA49Q01080 RTT107YHR154W 3213 nt2.06□□□□□ -2.08
RPA49Q01080 SNF5YBR289W 2718 nt2.06□□□□□ -2.08
RPA49Q01080 MMS22YLR320W 4365 nt2.06□□□□□ -2.08
RPA49Q01080 SPO22YIL073C 2928 nt2.06□□□□□ -2.08
RPA49Q01080 YDR341CYDR341C 1824 nt2.05□□□□□ -2.08
RPA49Q01080 YER068C-AYER068C-A 432 nt2.05□□□□□ -2.08
RPA49Q01080 TOM22YNL131W 459 nt2.05□□□□□ -2.08
RPA49Q01080 MNL2YLR057W 2550 nt2.05□□□□□ -2.08
RPA49Q01080 PEP1YBL017C 4740 nt2.05□□□□□ -2.08
RPA49Q01080 GRR1YJR090C 3456 nt2.05□□□□□ -2.08
RPA49Q01080 HER1YOR227W 3741 nt2.04□□□□□ -2.08
RPA49Q01080 VMR1YHL035C 4779 nt2.04□□□□□ -2.08
RPA49Q01080 RPL27BYDR471W 411 nt2.04□□□□□ -2.08
RPA49Q01080 HOP2YGL033W 657 nt2.04□□□□□ -2.08
RPA49Q01080 YGL069CYGL069C 465 nt2.04□□□□□ -2.08
RPA49Q01080 YGR025WYGR025W 303 nt2.04□□□□□ -2.08
RPA49Q01080 NAM7YMR080C 2916 nt2.04□□□□□ -2.08
RPA49Q01080 YPL205CYPL205C 345 nt2.04□□□□□ -2.08
RPA49Q01080 STB4YMR019W 2850 nt2.04□□□□□ -2.08
RPA49Q01080 YLR053CYLR053C 327 nt2.03□□□□□ -2.08
RPA49Q01080 RPS18BYML026C 441 nt2.03□□□□□ -2.08
RPA49Q01080 CMC2YBL059C-A 330 nt2.03□□□□□ -2.08
RPA49Q01080 SMY1YKL079W 1971 nt2.03□□□□□ -2.08
RPA49Q01080 NOT5YPR072W 1683 nt2.02□□□□□ -2.09
RPA49Q01080 SYH1YPL105C 2550 nt2.02□□□□□ -2.09
RPA49Q01080 YDL118WYDL118W 381 nt2.02□□□□□ -2.09
RPA49Q01080 YER006C-AYER006C-A 318 nt2.02□□□□□ -2.09
RPA49Q01080 YGL024WYGL024W 336 nt2.02□□□□□ -2.09
RPA49Q01080 YMR153C-AYMR153C-A 336 nt2.02□□□□□ -2.09
RPA49Q01080 PEX8YGR077C 1770 nt2.02□□□□□ -2.09
RPA49Q01080 COX1Q0045 1605 nt2.02□□□□□ -2.09
RPA49Q01080 REV3YPL167C 4515 nt2.01□□□□□ -2.09
RPA49Q01080 RPL37BYDR500C 267 nt2.01□□□□□ -2.09
RPA49Q01080 YER121WYER121W 345 nt2.01□□□□□ -2.09
RPA49Q01080 TEN1YLR010C 483 nt2.01□□□□□ -2.09
RPA49Q01080 YML084WYML084W 309 nt2.01□□□□□ -2.09
RPA49Q01080 CAT2YML042W 2013 nt2.01□□□□□ -2.09
RPA49Q01080 YDL062WYDL062W 426 nt2□□□□□ -2.09
RPA49Q01080 FCF2YLR051C 654 nt2□□□□□ -2.09
RPA49Q01080 YPR146CYPR146C 330 nt2□□□□□ -2.09
RPA49Q01080 RPH1YER169W 2391 nt2□□□□□ -2.09
RPA49Q01080 YLR149CYLR149C 2193 nt1.99□□□□□ -2.09
RPA49Q01080 YCR102W-AYCR102W-A 198 nt1.99□□□□□ -2.09
RPA49Q01080 YKL063CYKL063C 504 nt1.99□□□□□ -2.09
RPA49Q01080 HSK3YKL138C-A 210 nt1.99□□□□□ -2.09
RPA49Q01080 YBR224WYBR224W 516 nt1.99□□□□□ -2.09
RPA49Q01080 COS111YBR203W 2775 nt1.99□□□□□ -2.09
RPA49Q01080 CHC1YGL206C 4962 nt1.99□□□□□ -2.09
RPA49Q01080 CDC24YAL041W 2565 nt1.99□□□□□ -2.09
RPA49Q01080 SLM1YIL105C 2061 nt1.98□□□□□ -2.09
RPA49Q01080 SWT1YOR166C 1377 nt1.98□□□□□ -2.09
RPA49Q01080 LYS9YNR050C 1341 nt1.98□□□□□ -2.09
RPA49Q01080 DIS3YOL021C 3006 nt1.98□□□□□ -2.09
RPA49Q01080 PEP3YLR148W 2757 nt1.98□□□□□ -2.09
RPA49Q01080 HUR1YGL168W 333 nt1.98□□□□□ -2.09
RPA49Q01080 YLR101CYLR101C 396 nt1.98□□□□□ -2.09
RPA49Q01080 YBR032WYBR032W 303 nt1.98□□□□□ -2.09
RPA49Q01080 YOR394C-AYOR394C-A 168 nt1.98□□□□□ -2.09
RPA49Q01080 SIR4YDR227W 4077 nt1.98□□□□□ -2.09
RPA49Q01080 YOR392WYOR392W 444 nt1.97□□□□□ -2.09
RPA49Q01080 EGD1YPL037C 474 nt1.97□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 54.3 ms