Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 YEL050W-AYEL050W-A 192 nt2.2□□□□□ -2.06
SUB1P54000 SMB1YER029C 591 nt2.2□□□□□ -2.06
SUB1P54000 tT(UGU)HtT(UGU)H 72 nt2.2□□□□□ -2.06
SUB1P54000 CTK3YML112W 891 nt2.2□□□□□ -2.06
SUB1P54000 UBX4YMR067C 1251 nt2.2□□□□□ -2.06
SUB1P54000 RCN2YOR220W 798 nt2.2□□□□□ -2.06
SUB1P54000 YOR248WYOR248W 303 nt2.2□□□□□ -2.06
SUB1P54000 YGR250CYGR250C 2346 nt2.2□□□□□ -2.06
SUB1P54000 TFC8YPL007C 1767 nt2.2□□□□□ -2.06
SUB1P54000 SAP190YKR028W 3102 nt2.19□□□□□ -2.06
SUB1P54000 PAU3YCR104W 375 nt2.19□□□□□ -2.06
SUB1P54000 RPL31AYDL075W 342 nt2.19□□□□□ -2.06
SUB1P54000 snR79snR79 84 nt2.19□□□□□ -2.06
SUB1P54000 YER068C-AYER068C-A 432 nt2.19□□□□□ -2.06
SUB1P54000 PKR1YMR123W 369 nt2.19□□□□□ -2.06
SUB1P54000 SMY1YKL079W 1971 nt2.19□□□□□ -2.06
SUB1P54000 NOP53YPL146C 1368 nt2.19□□□□□ -2.06
SUB1P54000 BRE1YDL074C 2103 nt2.18□□□□□ -2.06
SUB1P54000 IRC16YPR038W 360 nt2.18□□□□□ -2.06
SUB1P54000 MSS18YPR134W 807 nt2.18□□□□□ -2.06
SUB1P54000 MSC6YOR354C 2079 nt2.18□□□□□ -2.06
SUB1P54000 YOR343W-BYOR343W-B 5313 nt2.17□□□□□ -2.06
SUB1P54000 UBR2YLR024C 5619 nt2.17□□□□□ -2.06
SUB1P54000 YMR045CYMR045C 5268 nt2.17□□□□□ -2.06
SUB1P54000 YGL024WYGL024W 336 nt2.17□□□□□ -2.06
SUB1P54000 MBB1YJL199C 327 nt2.17□□□□□ -2.06
SUB1P54000 TRX1YLR043C 312 nt2.17□□□□□ -2.06
SUB1P54000 SKI3YPR189W 4299 nt2.17□□□□□ -2.06
SUB1P54000 FKS1YLR342W 5631 nt2.16□□□□□ -2.06
SUB1P54000 CGI121YML036W 546 nt2.16□□□□□ -2.06
SUB1P54000 SIP18YMR175W 240 nt2.16□□□□□ -2.06
SUB1P54000 YMR230W-AYMR230W-A 189 nt2.16□□□□□ -2.06
SUB1P54000 YGR109W-BYGR109W-B 4644 nt2.16□□□□□ -2.06
SUB1P54000 PDR3YBL005W 2931 nt2.15□□□□□ -2.06
SUB1P54000 ABM1YJR108W 372 nt2.15□□□□□ -2.07
SUB1P54000 YKL183C-AYKL183C-A 213 nt2.15□□□□□ -2.07
SUB1P54000 ASM4YDL088C 1587 nt2.15□□□□□ -2.07
SUB1P54000 SBE22YHR103W 2559 nt2.14□□□□□ -2.07
SUB1P54000 CTR9YOL145C 3234 nt2.14□□□□□ -2.07
SUB1P54000 EMC4YGL231C 573 nt2.14□□□□□ -2.07
SUB1P54000 CIC1YHR052W 1131 nt2.14□□□□□ -2.07
SUB1P54000 YKL068W-AYKL068W-A 237 nt2.14□□□□□ -2.07
SUB1P54000 SNU56YDR240C 1479 nt2.14□□□□□ -2.07
SUB1P54000 SHE9YDR393W 1371 nt2.13□□□□□ -2.07
SUB1P54000 UTP22YGR090W 3714 nt2.13□□□□□ -2.07
SUB1P54000 PHR1YOR386W 1698 nt2.13□□□□□ -2.07
SUB1P54000 RPS24AYER074W 408 nt2.13□□□□□ -2.07
SUB1P54000 RPS18BYML026C 441 nt2.13□□□□□ -2.07
SUB1P54000 CMC2YBL059C-A 330 nt2.13□□□□□ -2.07
SUB1P54000 MF(ALPHA)1YPL187W 498 nt2.13□□□□□ -2.07
SUB1P54000 YBR184WYBR184W 1572 nt2.12□□□□□ -2.07
SUB1P54000 GCN4YEL009C 846 nt2.12□□□□□ -2.07
SUB1P54000 YAL016C-BYAL016C-B 186 nt2.12□□□□□ -2.07
SUB1P54000 STE18YJR086W 333 nt2.12□□□□□ -2.07
SUB1P54000 FCF2YLR051C 654 nt2.12□□□□□ -2.07
SUB1P54000 SPO24YPR036W-A 204 nt2.12□□□□□ -2.07
SUB1P54000 YPR153WYPR153W 423 nt2.12□□□□□ -2.07
SUB1P54000 HMI1YOL095C 2121 nt2.11□□□□□ -2.07
SUB1P54000 COX1Q0045 1605 nt2.11□□□□□ -2.07
SUB1P54000 YOR019WYOR019W 2193 nt2.11□□□□□ -2.07
SUB1P54000 PSY1YKL076C 384 nt2.11□□□□□ -2.07
SUB1P54000 PET123YOR158W 957 nt2.11□□□□□ -2.07
SUB1P54000 DIS3YOL021C 3006 nt2.1□□□□□ -2.07
SUB1P54000 PPN1YDR452W 2025 nt2.1□□□□□ -2.07
SUB1P54000 ALK2YBL009W 2031 nt2.1□□□□□ -2.07
SUB1P54000 YSW1YBR148W 1830 nt2.1□□□□□ -2.07
SUB1P54000 YDL152WYDL152W 366 nt2.1□□□□□ -2.07
SUB1P54000 YAP3YHL009C 993 nt2.1□□□□□ -2.07
SUB1P54000 RLM1YPL089C 2031 nt2.1□□□□□ -2.07
SUB1P54000 SEF1YBL066C 3447 nt2.1□□□□□ -2.07
SUB1P54000 MYO2YOR326W 4725 nt2.09□□□□□ -2.07
SUB1P54000 YBL073WYBL073W 312 nt2.09□□□□□ -2.07
SUB1P54000 IRE1YHR079C 3348 nt2.09□□□□□ -2.07
SUB1P54000 RPL9AYGL147C 576 nt2.08□□□□□ -2.08
SUB1P54000 snR189snR189 189 nt2.08□□□□□ -2.08
SUB1P54000 YPR039WYPR039W 336 nt2.08□□□□□ -2.08
SUB1P54000 SNF5YBR289W 2718 nt2.08□□□□□ -2.08
SUB1P54000 YHR214W-AYHR214W-A 486 nt2.07□□□□□ -2.08
SUB1P54000 YAR068WYAR068W 486 nt2.07□□□□□ -2.08
SUB1P54000 snR43snR43 209 nt2.07□□□□□ -2.08
SUB1P54000 APL5YPL195W 2799 nt2.07□□□□□ -2.08
SUB1P54000 MSS11YMR164C 2277 nt2.06□□□□□ -2.08
SUB1P54000 QCR7YDR529C 384 nt2.06□□□□□ -2.08
SUB1P54000 CRG1YHR209W 876 nt2.06□□□□□ -2.08
SUB1P54000 MCM22YJR135C 720 nt2.06□□□□□ -2.08
SUB1P54000 RPS22BYLR367W 393 nt2.06□□□□□ -2.08
SUB1P54000 DDR48YMR173W 1293 nt2.06□□□□□ -2.08
SUB1P54000 MON2YNL297C 4911 nt2.06□□□□□ -2.08
SUB1P54000 YGR265WYGR265W 411 nt2.05□□□□□ -2.08
SUB1P54000 PAU14YIL176C 363 nt2.05□□□□□ -2.08
SUB1P54000 PAU1YJL223C 363 nt2.05□□□□□ -2.08
SUB1P54000 FMP23YBR047W 528 nt2.05□□□□□ -2.08
SUB1P54000 YPR146CYPR146C 330 nt2.05□□□□□ -2.08
SUB1P54000 MSH5YDL154W 2706 nt2.05□□□□□ -2.08
SUB1P54000 IRC20YLR247C 4671 nt2.05□□□□□ -2.08
SUB1P54000 YCS4YLR272C 3531 nt2.05□□□□□ -2.08
SUB1P54000 CTF4YPR135W 2784 nt2.04□□□□□ -2.08
SUB1P54000 KAP122YGL016W 3246 nt2.04□□□□□ -2.08
SUB1P54000 EAF6YJR082C 342 nt2.04□□□□□ -2.08
SUB1P54000 YJR098CYJR098C 1971 nt2.04□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 112.5 ms