Protein–RNA interactions for Protein: P53950

VAC7, Vacuolar segregation protein 7, yeastyeast

Predictions only

Length 1,165 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAC7P53950 BFA1YJR053W 1725 nt1.84□□□□□ -2.11
VAC7P53950 CDC50YCR094W 1176 nt1.84□□□□□ -2.11
VAC7P53950 YER188C-AYER188C-A 300 nt1.84□□□□□ -2.11
VAC7P53950 tT(UGU)Q1tT(UGU)Q1 76 nt1.84□□□□□ -2.11
VAC7P53950 RPA34YJL148W 702 nt1.84□□□□□ -2.11
VAC7P53950 NCE101YJL205C 162 nt1.84□□□□□ -2.11
VAC7P53950 SNC1YAL030W 354 nt1.84□□□□□ -2.11
VAC7P53950 VTI1YMR197C 654 nt1.84□□□□□ -2.11
VAC7P53950 FYV12YOR183W 390 nt1.84□□□□□ -2.11
VAC7P53950 YOR392WYOR392W 444 nt1.84□□□□□ -2.11
VAC7P53950 YBR076C-AYBR076C-A 267 nt1.84□□□□□ -2.11
VAC7P53950 RTT101YJL047C 2529 nt1.84□□□□□ -2.12
VAC7P53950 ADR1YDR216W 3972 nt1.84□□□□□ -2.12
VAC7P53950 YBR012W-AYBR012W-A 1323 nt1.84□□□□□ -2.12
VAC7P53950 YOR142W-AYOR142W-A 1323 nt1.84□□□□□ -2.12
VAC7P53950 YPR158W-AYPR158W-A 1323 nt1.84□□□□□ -2.12
VAC7P53950 NAN1YPL126W 2691 nt1.84□□□□□ -2.12
VAC7P53950 RUD3YOR216C 1455 nt1.83□□□□□ -2.12
VAC7P53950 ECL1YGR146C 636 nt1.83□□□□□ -2.12
VAC7P53950 YLR269CYLR269C 351 nt1.83□□□□□ -2.12
VAC7P53950 COX7YMR256C 183 nt1.83□□□□□ -2.12
VAC7P53950 TSC3YBR058C-A 243 nt1.83□□□□□ -2.12
VAC7P53950 YPL205CYPL205C 345 nt1.83□□□□□ -2.12
VAC7P53950 CDC60YPL160W 3273 nt1.83□□□□□ -2.12
VAC7P53950 PPN1YDR452W 2025 nt1.83□□□□□ -2.12
VAC7P53950 NOP10YHR072W-A 177 nt1.82□□□□□ -2.12
VAC7P53950 ANS1YHR126C 480 nt1.82□□□□□ -2.12
VAC7P53950 VPS8YAL002W 3825 nt1.82□□□□□ -2.12
VAC7P53950 YJL007CYJL007C 315 nt1.82□□□□□ -2.12
VAC7P53950 YMR052C-AYMR052C-A 366 nt1.82□□□□□ -2.12
VAC7P53950 YOR248WYOR248W 303 nt1.82□□□□□ -2.12
VAC7P53950 SOK2YMR016C 2358 nt1.81□□□□□ -2.12
VAC7P53950 UBR2YLR024C 5619 nt1.81□□□□□ -2.12
VAC7P53950 IRC10YOL015W 1761 nt1.81□□□□□ -2.12
VAC7P53950 YJR157WYJR157W 363 nt1.81□□□□□ -2.12
VAC7P53950 GRX8YLR364W 330 nt1.81□□□□□ -2.12
VAC7P53950 snR54snR54 86 nt1.81□□□□□ -2.12
VAC7P53950 VPS52YDR484W 1926 nt1.81□□□□□ -2.12
VAC7P53950 MET18YIL128W 3099 nt1.81□□□□□ -2.12
VAC7P53950 VOA1YGR106C 798 nt1.8□□□□□ -2.12
VAC7P53950 YMR324CYMR324C 243 nt1.8□□□□□ -2.12
VAC7P53950 ROX1YPR065W 1107 nt1.8□□□□□ -2.12
VAC7P53950 HMLALPHA2YCL067C 633 nt1.79□□□□□ -2.12
VAC7P53950 MATALPHA2YCR039C 633 nt1.79□□□□□ -2.12
VAC7P53950 YDL041WYDL041W 354 nt1.79□□□□□ -2.12
VAC7P53950 YHR214W-AYHR214W-A 486 nt1.79□□□□□ -2.12
VAC7P53950 YAR068WYAR068W 486 nt1.79□□□□□ -2.12
VAC7P53950 YPR039WYPR039W 336 nt1.79□□□□□ -2.12
VAC7P53950 RPB5YBR154C 648 nt1.79□□□□□ -2.12
VAC7P53950 MSS11YMR164C 2277 nt1.79□□□□□ -2.12
VAC7P53950 UTP21YLR409C 2820 nt1.79□□□□□ -2.12
VAC7P53950 VPH1YOR270C 2523 nt1.78□□□□□ -2.12
VAC7P53950 YNL144CYNL144C 2223 nt1.78□□□□□ -2.12
VAC7P53950 YJR098CYJR098C 1971 nt1.78□□□□□ -2.12
VAC7P53950 snR79snR79 84 nt1.78□□□□□ -2.12
VAC7P53950 VAR1Q0140 1197 nt1.78□□□□□ -2.12
VAC7P53950 LSO2YGR169C-A 279 nt1.78□□□□□ -2.12
VAC7P53950 YHR125WYHR125W 306 nt1.78□□□□□ -2.12
VAC7P53950 NBL1YHR199C-A 222 nt1.78□□□□□ -2.12
VAC7P53950 YHR210CYHR210C 1026 nt1.78□□□□□ -2.12
VAC7P53950 YMR153C-AYMR153C-A 336 nt1.78□□□□□ -2.12
VAC7P53950 RUF22RUF22 515 nt1.78□□□□□ -2.12
VAC7P53950 RTC6YPL183W-A 282 nt1.78□□□□□ -2.12
VAC7P53950 NIC96YFR002W 2520 nt1.78□□□□□ -2.12
VAC7P53950 YGR025WYGR025W 303 nt1.77□□□□□ -2.13
VAC7P53950 SMD1YGR074W 441 nt1.77□□□□□ -2.13
VAC7P53950 YHR139C-AYHR139C-A 312 nt1.77□□□□□ -2.13
VAC7P53950 YLR222C-AYLR222C-A 231 nt1.77□□□□□ -2.13
VAC7P53950 IRC20YLR247C 4671 nt1.77□□□□□ -2.13
VAC7P53950 SEC22YLR268W 645 nt1.77□□□□□ -2.13
VAC7P53950 TIF11YMR260C 462 nt1.77□□□□□ -2.13
VAC7P53950 CDC33YOL139C 642 nt1.77□□□□□ -2.13
VAC7P53950 snR13snR13 124 nt1.77□□□□□ -2.13
VAC7P53950 MYO2YOR326W 4725 nt1.76□□□□□ -2.13
VAC7P53950 KAR3YPR141C 2190 nt1.76□□□□□ -2.13
VAC7P53950 CHC1YGL206C 4962 nt1.76□□□□□ -2.13
VAC7P53950 ARP7YPR034W 1434 nt1.76□□□□□ -2.13
VAC7P53950 VMR1YHL035C 4779 nt1.76□□□□□ -2.13
VAC7P53950 YER006C-AYER006C-A 318 nt1.76□□□□□ -2.13
VAC7P53950 MSL1YIR009W 336 nt1.76□□□□□ -2.13
VAC7P53950 TEN1YLR010C 483 nt1.76□□□□□ -2.13
VAC7P53950 ATP17YDR377W 306 nt1.75□□□□□ -2.13
VAC7P53950 YER068C-AYER068C-A 432 nt1.75□□□□□ -2.13
VAC7P53950 tT(UGU)HtT(UGU)H 72 nt1.75□□□□□ -2.13
VAC7P53950 YLR101CYLR101C 396 nt1.75□□□□□ -2.13
VAC7P53950 SNC2YOR327C 348 nt1.75□□□□□ -2.13
VAC7P53950 YOR333CYOR333C 417 nt1.75□□□□□ -2.13
VAC7P53950 EGD1YPL037C 474 nt1.75□□□□□ -2.13
VAC7P53950 CDC53YDL132W 2448 nt1.75□□□□□ -2.13
VAC7P53950 CRM1YGR218W 3255 nt1.74□□□□□ -2.13
VAC7P53950 SFB2YNL049C 2631 nt1.74□□□□□ -2.13
VAC7P53950 HER1YOR227W 3741 nt1.74□□□□□ -2.13
VAC7P53950 TRL1YJL087C 2484 nt1.74□□□□□ -2.13
VAC7P53950 SPC72YAL047C 1869 nt1.74□□□□□ -2.13
VAC7P53950 GDS1YOR355W 1569 nt1.74□□□□□ -2.13
VAC7P53950 YGL024WYGL024W 336 nt1.74□□□□□ -2.13
VAC7P53950 YSW1YBR148W 1830 nt1.74□□□□□ -2.13
VAC7P53950 SPO22YIL073C 2928 nt1.74□□□□□ -2.13
VAC7P53950 RTP1YMR185W 2946 nt1.73□□□□□ -2.13
VAC7P53950 HSH155YMR288W 2916 nt1.73□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 28.1 ms