Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 SPC72YAL047C 1869 nt1.57□□□□□ -2.16
UFD1P53044 YER068C-AYER068C-A 432 nt1.57□□□□□ -2.16
UFD1P53044 LSO2YGR169C-A 279 nt1.57□□□□□ -2.16
UFD1P53044 YAP3YHL009C 993 nt1.57□□□□□ -2.16
UFD1P53044 YMR272W-BYMR272W-B 108 nt1.57□□□□□ -2.16
UFD1P53044 YOR392WYOR392W 444 nt1.57□□□□□ -2.16
UFD1P53044 ROX1YPR065W 1107 nt1.57□□□□□ -2.16
UFD1P53044 YEL018C-AYEL018C-A 534 nt1.56□□□□□ -2.16
UFD1P53044 tT(UGU)Q1tT(UGU)Q1 76 nt1.56□□□□□ -2.16
UFD1P53044 SYM1YLR251W 594 nt1.56□□□□□ -2.16
UFD1P53044 SEN15YMR059W 387 nt1.56□□□□□ -2.16
UFD1P53044 YOL159C-AYOL159C-A 273 nt1.56□□□□□ -2.16
UFD1P53044 YOR394C-AYOR394C-A 168 nt1.56□□□□□ -2.16
UFD1P53044 PEP1YBL017C 4740 nt1.56□□□□□ -2.16
UFD1P53044 YDR341CYDR341C 1824 nt1.56□□□□□ -2.16
UFD1P53044 CRM1YGR218W 3255 nt1.56□□□□□ -2.16
UFD1P53044 YML084WYML084W 309 nt1.55□□□□□ -2.16
UFD1P53044 MRPL44YMR225C 297 nt1.55□□□□□ -2.16
UFD1P53044 SNC2YOR327C 348 nt1.55□□□□□ -2.16
UFD1P53044 SAR1YPL218W 573 nt1.55□□□□□ -2.16
UFD1P53044 VPS52YDR484W 1926 nt1.55□□□□□ -2.16
UFD1P53044 SPO22YIL073C 2928 nt1.55□□□□□ -2.16
UFD1P53044 MUD2YKL074C 1584 nt1.55□□□□□ -2.16
UFD1P53044 KAR3YPR141C 2190 nt1.54□□□□□ -2.16
UFD1P53044 RPL37BYDR500C 267 nt1.54□□□□□ -2.16
UFD1P53044 Q0144Q0144 330 nt1.54□□□□□ -2.16
UFD1P53044 RPI1YIL119C 1224 nt1.54□□□□□ -2.16
UFD1P53044 YLR053CYLR053C 327 nt1.54□□□□□ -2.16
UFD1P53044 SEC22YLR268W 645 nt1.54□□□□□ -2.16
UFD1P53044 CTK3YML112W 891 nt1.54□□□□□ -2.16
UFD1P53044 SPC29YPL124W 762 nt1.54□□□□□ -2.16
UFD1P53044 HSH155YMR288W 2916 nt1.54□□□□□ -2.16
UFD1P53044 FIG2YCR089W 4830 nt1.54□□□□□ -2.16
UFD1P53044 HER1YOR227W 3741 nt1.54□□□□□ -2.16
UFD1P53044 YDL041WYDL041W 354 nt1.53□□□□□ -2.16
UFD1P53044 YDL062WYDL062W 426 nt1.53□□□□□ -2.16
UFD1P53044 snR79snR79 84 nt1.53□□□□□ -2.16
UFD1P53044 PPN1YDR452W 2025 nt1.53□□□□□ -2.16
UFD1P53044 YER188C-AYER188C-A 300 nt1.53□□□□□ -2.16
UFD1P53044 NAM7YMR080C 2916 nt1.53□□□□□ -2.16
UFD1P53044 PBI2YNL015W 228 nt1.53□□□□□ -2.16
UFD1P53044 RIC1YLR039C 3171 nt1.53□□□□□ -2.17
UFD1P53044 SBE22YHR103W 2559 nt1.53□□□□□ -2.17
UFD1P53044 LYS9YNR050C 1341 nt1.52□□□□□ -2.17
UFD1P53044 SYH1YPL105C 2550 nt1.52□□□□□ -2.17
UFD1P53044 RPL16AYIL133C 600 nt1.52□□□□□ -2.17
UFD1P53044 HSK3YKL138C-A 210 nt1.52□□□□□ -2.17
UFD1P53044 YOL013W-BYOL013W-B 291 nt1.52□□□□□ -2.17
UFD1P53044 SLM6YBR266C 453 nt1.52□□□□□ -2.17
UFD1P53044 MSS11YMR164C 2277 nt1.52□□□□□ -2.17
UFD1P53044 VPS35YJL154C 2835 nt1.52□□□□□ -2.17
UFD1P53044 GUP1YGL084C 1683 nt1.51□□□□□ -2.17
UFD1P53044 NOT5YPR072W 1683 nt1.51□□□□□ -2.17
UFD1P53044 CDC27YBL084C 2277 nt1.51□□□□□ -2.17
UFD1P53044 CAT2YML042W 2013 nt1.51□□□□□ -2.17
UFD1P53044 YDR286CYDR286C 345 nt1.51□□□□□ -2.17
UFD1P53044 MTC7YEL033W 420 nt1.51□□□□□ -2.17
UFD1P53044 YGL069CYGL069C 465 nt1.51□□□□□ -2.17
UFD1P53044 FYV7YLR068W 456 nt1.51□□□□□ -2.17
UFD1P53044 YNL122CYNL122C 348 nt1.51□□□□□ -2.17
UFD1P53044 Q0017Q0017 162 nt1.51□□□□□ -2.17
UFD1P53044 STB4YMR019W 2850 nt1.51□□□□□ -2.17
UFD1P53044 RKM1YPL208W 1752 nt1.5□□□□□ -2.17
UFD1P53044 SGD1YLR336C 2700 nt1.5□□□□□ -2.17
UFD1P53044 HSL1YKL101W 4557 nt1.5□□□□□ -2.17
UFD1P53044 SLM1YIL105C 2061 nt1.49□□□□□ -2.17
UFD1P53044 YBR012W-AYBR012W-A 1323 nt1.49□□□□□ -2.17
UFD1P53044 YOR142W-AYOR142W-A 1323 nt1.49□□□□□ -2.17
UFD1P53044 YPR158W-AYPR158W-A 1323 nt1.49□□□□□ -2.17
UFD1P53044 MNL2YLR057W 2550 nt1.49□□□□□ -2.17
UFD1P53044 RPF1YHR088W 888 nt1.49□□□□□ -2.17
UFD1P53044 BIG1YHR101C 1008 nt1.49□□□□□ -2.17
UFD1P53044 TEN1YLR010C 483 nt1.49□□□□□ -2.17
UFD1P53044 YBR224WYBR224W 516 nt1.49□□□□□ -2.17
UFD1P53044 GPX2YBR244W 489 nt1.49□□□□□ -2.17
UFD1P53044 MSH6YDR097C 3729 nt1.49□□□□□ -2.17
UFD1P53044 TUS1YLR425W 3924 nt1.49□□□□□ -2.17
UFD1P53044 SHE9YDR393W 1371 nt1.48□□□□□ -2.17
UFD1P53044 SNF5YBR289W 2718 nt1.48□□□□□ -2.17
UFD1P53044 YGR045CYGR045C 363 nt1.48□□□□□ -2.17
UFD1P53044 PET123YOR158W 957 nt1.48□□□□□ -2.17
UFD1P53044 GAL7YBR018C 1101 nt1.48□□□□□ -2.17
UFD1P53044 EGD1YPL037C 474 nt1.48□□□□□ -2.17
UFD1P53044 TSC3YBR058C-A 243 nt1.48□□□□□ -2.17
UFD1P53044 YPR039WYPR039W 336 nt1.48□□□□□ -2.17
UFD1P53044 YBR174CYBR174C 315 nt1.48□□□□□ -2.17
UFD1P53044 YCR087C-AYCR087C-A 462 nt1.47□□□□□ -2.17
UFD1P53044 YER084W-AYER084W-A 513 nt1.47□□□□□ -2.17
UFD1P53044 YHR139C-AYHR139C-A 312 nt1.47□□□□□ -2.17
UFD1P53044 YLR269CYLR269C 351 nt1.47□□□□□ -2.17
UFD1P53044 YBL083CYBL083C 426 nt1.47□□□□□ -2.17
UFD1P53044 YOR248WYOR248W 303 nt1.47□□□□□ -2.17
UFD1P53044 YPR146CYPR146C 330 nt1.47□□□□□ -2.17
UFD1P53044 HCS1YKL017C 2052 nt1.47□□□□□ -2.17
UFD1P53044 SWT1YOR166C 1377 nt1.47□□□□□ -2.17
UFD1P53044 KIP1YBL063W 3336 nt1.46□□□□□ -2.18
UFD1P53044 BTT1YDR252W 450 nt1.46□□□□□ -2.18
UFD1P53044 YEL030C-AYEL030C-A 315 nt1.46□□□□□ -2.18
UFD1P53044 MXR1YER042W 555 nt1.46□□□□□ -2.18
UFD1P53044 YHR130CYHR130C 336 nt1.46□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 41.8 ms