Protein–RNA interactions for Protein: P49686

NUP42, Nucleoporin NUP42, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP42P49686 SUL1YBR294W 2580 nt3.81□□□□□ -1.8
NUP42P49686 PMP1YCR024C-A 123 nt3.81□□□□□ -1.8
NUP42P49686 MIM2YLR099W-A 264 nt3.81□□□□□ -1.8
NUP42P49686 MPT5YGL178W 2580 nt3.81□□□□□ -1.8
NUP42P49686 HRD3YLR207W 2502 nt3.81□□□□□ -1.8
NUP42P49686 YMR326CYMR326C 309 nt3.8□□□□□ -1.8
NUP42P49686 RPH1YER169W 2391 nt3.8□□□□□ -1.8
NUP42P49686 YHR080CYHR080C 4038 nt3.79□□□□□ -1.8
NUP42P49686 COX26YDR119W-A 201 nt3.79□□□□□ -1.8
NUP42P49686 NOP10YHR072W-A 177 nt3.79□□□□□ -1.8
NUP42P49686 PFF1YBR074W 2931 nt3.79□□□□□ -1.8
NUP42P49686 OLE1YGL055W 1533 nt3.79□□□□□ -1.8
NUP42P49686 TAE2YPL009C 3117 nt3.78□□□□□ -1.8
NUP42P49686 FLO8YER109C 2400 nt3.78□□□□□ -1.8
NUP42P49686 TMA19YKL056C 504 nt3.78□□□□□ -1.8
NUP42P49686 SCH9YHR205W 2475 nt3.78□□□□□ -1.8
NUP42P49686 PAN1YIR006C 4443 nt3.77□□□□□ -1.81
NUP42P49686 DNF2YDR093W 4839 nt3.77□□□□□ -1.81
NUP42P49686 MTC4YBR255W 2085 nt3.77□□□□□ -1.81
NUP42P49686 YDR544CYDR544C 429 nt3.77□□□□□ -1.81
NUP42P49686 YGR050CYGR050C 357 nt3.77□□□□□ -1.81
NUP42P49686 HSX1tR(CCU)J 72 nt3.77□□□□□ -1.81
NUP42P49686 EMC6YLL014W 327 nt3.77□□□□□ -1.81
NUP42P49686 YNL114CYNL114C 372 nt3.77□□□□□ -1.81
NUP42P49686 RFX1YLR176C 2436 nt3.77□□□□□ -1.81
NUP42P49686 RRM3YHR031C 2172 nt3.77□□□□□ -1.81
NUP42P49686 MYO3YKL129C 3819 nt3.76□□□□□ -1.81
NUP42P49686 YDR182W-AYDR182W-A 204 nt3.76□□□□□ -1.81
NUP42P49686 HYP2YEL034W 474 nt3.76□□□□□ -1.81
NUP42P49686 MNL2YLR057W 2550 nt3.76□□□□□ -1.81
NUP42P49686 CRM1YGR218W 3255 nt3.76□□□□□ -1.81
NUP42P49686 MSK1YNL073W 1731 nt3.75□□□□□ -1.81
NUP42P49686 ATG2YNL242W 4779 nt3.75□□□□□ -1.81
NUP42P49686 SMC3YJL074C 3693 nt3.75□□□□□ -1.81
NUP42P49686 snR72snR72 98 nt3.75□□□□□ -1.81
NUP42P49686 tN(GUU)CtN(GUU)C 74 nt3.75□□□□□ -1.81
NUP42P49686 tN(GUU)FtN(GUU)F 74 nt3.75□□□□□ -1.81
NUP42P49686 tN(GUU)GtN(GUU)G 74 nt3.75□□□□□ -1.81
NUP42P49686 tN(GUU)KtN(GUU)K 74 nt3.75□□□□□ -1.81
NUP42P49686 tN(GUU)LtN(GUU)L 74 nt3.75□□□□□ -1.81
NUP42P49686 tN(GUU)N1tN(GUU)N1 74 nt3.75□□□□□ -1.81
NUP42P49686 tN(GUU)N2tN(GUU)N2 74 nt3.75□□□□□ -1.81
NUP42P49686 tN(GUU)O1tN(GUU)O1 74 nt3.75□□□□□ -1.81
NUP42P49686 tN(GUU)O2tN(GUU)O2 74 nt3.75□□□□□ -1.81
NUP42P49686 tN(GUU)PtN(GUU)P 74 nt3.75□□□□□ -1.81
NUP42P49686 RPL42BYHR141C 321 nt3.75□□□□□ -1.81
NUP42P49686 RPL42AYNL162W 321 nt3.75□□□□□ -1.81
NUP42P49686 GAL11YOL051W 3246 nt3.74□□□□□ -1.81
NUP42P49686 YBR225WYBR225W 2703 nt3.74□□□□□ -1.81
NUP42P49686 PIG1YLR273C 1947 nt3.74□□□□□ -1.81
NUP42P49686 RGR1YLR071C 3249 nt3.74□□□□□ -1.81
NUP42P49686 YOR345CYOR345C 351 nt3.74□□□□□ -1.81
NUP42P49686 PIM1YBL022C 3402 nt3.74□□□□□ -1.81
NUP42P49686 MSC6YOR354C 2079 nt3.74□□□□□ -1.81
NUP42P49686 MMS22YLR320W 4365 nt3.73□□□□□ -1.81
NUP42P49686 AFI1YOR129C 2682 nt3.73□□□□□ -1.81
NUP42P49686 YBL012CYBL012C 402 nt3.73□□□□□ -1.81
NUP42P49686 CRS5YOR031W 210 nt3.73□□□□□ -1.81
NUP42P49686 YBR230W-AYBR230W-A 201 nt3.73□□□□□ -1.81
NUP42P49686 FUN30YAL019W 3396 nt3.72□□□□□ -1.81
NUP42P49686 YFR016CYFR016C 3702 nt3.72□□□□□ -1.81
NUP42P49686 SQS1YNL224C 2304 nt3.72□□□□□ -1.81
NUP42P49686 UBP14YBR058C 2346 nt3.72□□□□□ -1.81
NUP42P49686 GLC3YEL011W 2115 nt3.72□□□□□ -1.81
NUP42P49686 YBR174CYBR174C 315 nt3.72□□□□□ -1.81
NUP42P49686 GCV2YMR189W 3105 nt3.71□□□□□ -1.82
NUP42P49686 HEF3YNL014W 3135 nt3.71□□□□□ -1.82
NUP42P49686 NCA2YPR155C 1851 nt3.71□□□□□ -1.82
NUP42P49686 TFB5YDR079C-A 219 nt3.71□□□□□ -1.82
NUP42P49686 RPL23BYER117W 414 nt3.71□□□□□ -1.82
NUP42P49686 PMC1YGL006W 3522 nt3.71□□□□□ -1.82
NUP42P49686 NIP100YPL174C 2607 nt3.71□□□□□ -1.82
NUP42P49686 SWI5YDR146C 2130 nt3.7□□□□□ -1.82
NUP42P49686 YOR314W-AYOR314W-A 111 nt3.7□□□□□ -1.82
NUP42P49686 VPS16YPL045W 2397 nt3.7□□□□□ -1.82
NUP42P49686 GAL10YBR019C 2100 nt3.7□□□□□ -1.82
NUP42P49686 DUG2YBR281C 2637 nt3.69□□□□□ -1.82
NUP42P49686 YDL247W-AYDL247W-A 75 nt3.69□□□□□ -1.82
NUP42P49686 tK(CUU)CtK(CUU)C 73 nt3.69□□□□□ -1.82
NUP42P49686 tK(CUU)D1tK(CUU)D1 73 nt3.69□□□□□ -1.82
NUP42P49686 tK(CUU)D2tK(CUU)D2 73 nt3.69□□□□□ -1.82
NUP42P49686 tK(CUU)E1tK(CUU)E1 73 nt3.69□□□□□ -1.82
NUP42P49686 tK(CUU)E2tK(CUU)E2 73 nt3.69□□□□□ -1.82
NUP42P49686 tK(CUU)FtK(CUU)F 73 nt3.69□□□□□ -1.82
NUP42P49686 tK(CUU)G1tK(CUU)G1 73 nt3.69□□□□□ -1.82
NUP42P49686 tK(CUU)G2tK(CUU)G2 73 nt3.69□□□□□ -1.82
NUP42P49686 tK(CUU)G3tK(CUU)G3 73 nt3.69□□□□□ -1.82
NUP42P49686 tK(CUU)ItK(CUU)I 73 nt3.69□□□□□ -1.82
NUP42P49686 tK(CUU)JtK(CUU)J 73 nt3.69□□□□□ -1.82
NUP42P49686 tK(CUU)KtK(CUU)K 73 nt3.69□□□□□ -1.82
NUP42P49686 tK(CUU)MtK(CUU)M 73 nt3.69□□□□□ -1.82
NUP42P49686 tK(CUU)PtK(CUU)P 73 nt3.69□□□□□ -1.82
NUP42P49686 YHR073W-AYHR073W-A 177 nt3.69□□□□□ -1.82
NUP42P49686 YOL097W-AYOL097W-A 186 nt3.69□□□□□ -1.82
NUP42P49686 YCL001W-BYCL001W-B 255 nt3.69□□□□□ -1.82
NUP42P49686 PTP3YER075C 2787 nt3.69□□□□□ -1.82
NUP42P49686 NET1YJL076W 3570 nt3.69□□□□□ -1.82
NUP42P49686 DAN4YJR151C 3486 nt3.69□□□□□ -1.82
NUP42P49686 SRO7YPR032W 3102 nt3.68□□□□□ -1.82
NUP42P49686 SRP14YDL092W 441 nt3.68□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 44.7 ms