Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 RPB5YBR154C 648 nt0.27□□□□□ -2.37
TY1B-JR1P47098 SMY1YKL079W 1971 nt0.26□□□□□ -2.37
TY1B-JR1P47098 snR68snR68 136 nt0.26□□□□□ -2.37
TY1B-JR1P47098 YGL039WYGL039W 1047 nt0.26□□□□□ -2.37
TY1B-JR1P47098 YIL012WYIL012W 342 nt0.26□□□□□ -2.37
TY1B-JR1P47098 UAF30YOR295W 687 nt0.26□□□□□ -2.37
TY1B-JR1P47098 snR35snR35 204 nt0.26□□□□□ -2.37
TY1B-JR1P47098 COF1YLL050C 432 nt0.25□□□□□ -2.37
TY1B-JR1P47098 SWT1YOR166C 1377 nt0.25□□□□□ -2.37
TY1B-JR1P47098 DAS1YJL149W 1992 nt0.25□□□□□ -2.37
TY1B-JR1P47098 MEI4YER044C-A 1227 nt0.24□□□□□ -2.37
TY1B-JR1P47098 SWS2YNL081C 432 nt0.24□□□□□ -2.37
TY1B-JR1P47098 PSO2YMR137C 1986 nt0.24□□□□□ -2.37
TY1B-JR1P47098 RPL40BYKR094C 387 nt0.24□□□□□ -2.37
TY1B-JR1P47098 FMP23YBR047W 528 nt0.24□□□□□ -2.37
TY1B-JR1P47098 YPL135C-AYPL135C-A 174 nt0.24□□□□□ -2.37
TY1B-JR1P47098 BFR1YOR198C 1413 nt0.23□□□□□ -2.37
TY1B-JR1P47098 YFR054CYFR054C 579 nt0.23□□□□□ -2.37
TY1B-JR1P47098 YGL109WYGL109W 324 nt0.23□□□□□ -2.37
TY1B-JR1P47098 MSC6YOR354C 2079 nt0.23□□□□□ -2.37
TY1B-JR1P47098 YDL157CYDL157C 357 nt0.22□□□□□ -2.37
TY1B-JR1P47098 YOR376WYOR376W 369 nt0.22□□□□□ -2.37
TY1B-JR1P47098 SFM1YOR021C 642 nt0.22□□□□□ -2.37
TY1B-JR1P47098 GRX7YBR014C 612 nt0.22□□□□□ -2.37
TY1B-JR1P47098 RIM20YOR275C 1986 nt0.21□□□□□ -2.38
TY1B-JR1P47098 GDS1YOR355W 1569 nt0.21□□□□□ -2.38
TY1B-JR1P47098 YDR381C-AYDR381C-A 345 nt0.21□□□□□ -2.38
TY1B-JR1P47098 RPI1YIL119C 1224 nt0.21□□□□□ -2.38
TY1B-JR1P47098 REX3YLR107W 1215 nt0.21□□□□□ -2.38
TY1B-JR1P47098 snR13snR13 124 nt0.21□□□□□ -2.38
TY1B-JR1P47098 AHC2YCR082W 387 nt0.2□□□□□ -2.38
TY1B-JR1P47098 PCL2YDL127W 927 nt0.2□□□□□ -2.38
TY1B-JR1P47098 MZM1YDR493W 372 nt0.2□□□□□ -2.38
TY1B-JR1P47098 YNL089CYNL089C 477 nt0.2□□□□□ -2.38
TY1B-JR1P47098 YNL226WYNL226W 411 nt0.2□□□□□ -2.38
TY1B-JR1P47098 MRPL50YNR022C 420 nt0.2□□□□□ -2.38
TY1B-JR1P47098 YOR053WYOR053W 342 nt0.2□□□□□ -2.38
TY1B-JR1P47098 SLX4YLR135W 2247 nt0.2□□□□□ -2.38
TY1B-JR1P47098 NOP10YHR072W-A 177 nt0.19□□□□□ -2.38
TY1B-JR1P47098 RAD10YML095C 633 nt0.19□□□□□ -2.38
TY1B-JR1P47098 IRC23YOR044W 474 nt0.19□□□□□ -2.38
TY1B-JR1P47098 YIM2YMR151W 438 nt0.19□□□□□ -2.38
TY1B-JR1P47098 YBL094CYBL094C 333 nt0.19□□□□□ -2.38
TY1B-JR1P47098 TAD1YGL243W 1203 nt0.18□□□□□ -2.38
TY1B-JR1P47098 NME1NME1 340 nt0.18□□□□□ -2.38
TY1B-JR1P47098 HHT1YBR010W 411 nt0.18□□□□□ -2.38
TY1B-JR1P47098 TCA17YEL048C 459 nt0.17□□□□□ -2.38
TY1B-JR1P47098 YGR045CYGR045C 363 nt0.17□□□□□ -2.38
TY1B-JR1P47098 LAG1YHL003C 1236 nt0.17□□□□□ -2.38
TY1B-JR1P47098 IES4YOR189W 351 nt0.17□□□□□ -2.38
TY1B-JR1P47098 RRP15YPR143W 753 nt0.17□□□□□ -2.38
TY1B-JR1P47098 BFA1YJR053W 1725 nt0.17□□□□□ -2.38
TY1B-JR1P47098 FAR7YFR008W 666 nt0.17□□□□□ -2.38
TY1B-JR1P47098 VMA7YGR020C 357 nt0.17□□□□□ -2.38
TY1B-JR1P47098 GIC1YHR061C 945 nt0.17□□□□□ -2.38
TY1B-JR1P47098 GMC2YLR445W 567 nt0.17□□□□□ -2.38
TY1B-JR1P47098 SPC2YML055W 537 nt0.17□□□□□ -2.38
TY1B-JR1P47098 MIX23YBL107C 591 nt0.17□□□□□ -2.38
TY1B-JR1P47098 MDM36YPR083W 1740 nt0.16□□□□□ -2.38
TY1B-JR1P47098 KEG1YFR042W 603 nt0.16□□□□□ -2.38
TY1B-JR1P47098 BNS1YGR230W 414 nt0.16□□□□□ -2.38
TY1B-JR1P47098 YJL127C-BYJL127C-B 159 nt0.16□□□□□ -2.38
TY1B-JR1P47098 TIF11YMR260C 462 nt0.16□□□□□ -2.38
TY1B-JR1P47098 PEX15YOL044W 1152 nt0.16□□□□□ -2.38
TY1B-JR1P47098 AI3Q0060 1248 nt0.15□□□□□ -2.39
TY1B-JR1P47098 YBR200W-AYBR200W-A 165 nt0.15□□□□□ -2.39
TY1B-JR1P47098 AME1YBR211C 975 nt0.15□□□□□ -2.39
TY1B-JR1P47098 MXR1YER042W 555 nt0.14□□□□□ -2.39
TY1B-JR1P47098 EMC5YIL027C 426 nt0.14□□□□□ -2.39
TY1B-JR1P47098 YMR147WYMR147W 672 nt0.14□□□□□ -2.39
TY1B-JR1P47098 RRT16YNL105W 429 nt0.14□□□□□ -2.39
TY1B-JR1P47098 MLP1YKR095W 5628 nt0.14□□□□□ -2.39
TY1B-JR1P47098 SGO1YOR073W 1773 nt0.14□□□□□ -2.39
TY1B-JR1P47098 YFL041W-AYFL041W-A 192 nt0.14□□□□□ -2.39
TY1B-JR1P47098 YIL030W-AYIL030W-A 339 nt0.14□□□□□ -2.39
TY1B-JR1P47098 RPS24BYIL069C 408 nt0.14□□□□□ -2.39
TY1B-JR1P47098 YIR020CYIR020C 303 nt0.14□□□□□ -2.39
TY1B-JR1P47098 YPR014CYPR014C 330 nt0.14□□□□□ -2.39
TY1B-JR1P47098 SPT21YMR179W 2277 nt0.13□□□□□ -2.39
TY1B-JR1P47098 ECM25YJL201W 1800 nt0.13□□□□□ -2.39
TY1B-JR1P47098 YDL025W-AYDL025W-A 105 nt0.12□□□□□ -2.39
TY1B-JR1P47098 YER147C-AYER147C-A 411 nt0.12□□□□□ -2.39
TY1B-JR1P47098 YIL089WYIL089W 618 nt0.12□□□□□ -2.39
TY1B-JR1P47098 GLG1YKR058W 1851 nt0.12□□□□□ -2.39
TY1B-JR1P47098 BRX1YOL077C 876 nt0.12□□□□□ -2.39
TY1B-JR1P47098 YBR224WYBR224W 516 nt0.12□□□□□ -2.39
TY1B-JR1P47098 PEX34YCL056C 435 nt0.12□□□□□ -2.39
TY1B-JR1P47098 MFA1YDR461W 111 nt0.11□□□□□ -2.39
TY1B-JR1P47098 YGL217CYGL217C 342 nt0.11□□□□□ -2.39
TY1B-JR1P47098 YLR402WYLR402W 192 nt0.11□□□□□ -2.39
TY1B-JR1P47098 YLR458WYLR458W 381 nt0.11□□□□□ -2.39
TY1B-JR1P47098 NOP12YOL041C 1380 nt0.11□□□□□ -2.39
TY1B-JR1P47098 UTP10YJL109C 5310 nt0.11□□□□□ -2.39
TY1B-JR1P47098 YDL196WYDL196W 330 nt0.11□□□□□ -2.39
TY1B-JR1P47098 ULI1YFR026C 510 nt0.11□□□□□ -2.39
TY1B-JR1P47098 VPS25YJR102C 609 nt0.11□□□□□ -2.39
TY1B-JR1P47098 ABF2YMR072W 552 nt0.11□□□□□ -2.39
TY1B-JR1P47098 SGD1YLR336C 2700 nt0.11□□□□□ -2.39
TY1B-JR1P47098 HDA3YPR179C 1968 nt0.11□□□□□ -2.39
TY1B-JR1P47098 FUS2YMR232W 2034 nt0.1□□□□□ -2.39
Retrieved 100 of 7,029 protein–RNA pairs in 53.2 ms