Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 YOR343W-BYOR343W-B 5313 nt1.57□□□□□ -2.16
TDA11P38854 MSH6YDR097C 3729 nt1.57□□□□□ -2.16
TDA11P38854 RPL31AYDL075W 342 nt1.57□□□□□ -2.16
TDA11P38854 VMA21YGR105W 234 nt1.57□□□□□ -2.16
TDA11P38854 tQ(UUG)E2tQ(UUG)E2 72 nt1.57□□□□□ -2.16
TDA11P38854 YHR073W-AYHR073W-A 177 nt1.57□□□□□ -2.16
TDA11P38854 SEC22YLR268W 645 nt1.57□□□□□ -2.16
TDA11P38854 YNL010WYNL010W 726 nt1.57□□□□□ -2.16
TDA11P38854 YOR152CYOR152C 771 nt1.57□□□□□ -2.16
TDA11P38854 POL5YEL055C 3069 nt1.57□□□□□ -2.16
TDA11P38854 YLR419WYLR419W 4308 nt1.57□□□□□ -2.16
TDA11P38854 YLR149CYLR149C 2193 nt1.57□□□□□ -2.16
TDA11P38854 DAS1YJL149W 1992 nt1.56□□□□□ -2.16
TDA11P38854 YLR252WYLR252W 306 nt1.56□□□□□ -2.16
TDA11P38854 MRPL44YMR225C 297 nt1.56□□□□□ -2.16
TDA11P38854 YPR147CYPR147C 915 nt1.56□□□□□ -2.16
TDA11P38854 MON2YNL297C 4911 nt1.56□□□□□ -2.16
TDA11P38854 CCH1YGR217W 6120 nt1.55□□□□□ -2.16
TDA11P38854 YDR220CYDR220C 294 nt1.55□□□□□ -2.16
TDA11P38854 ATP17YDR377W 306 nt1.55□□□□□ -2.16
TDA11P38854 YGL024WYGL024W 336 nt1.55□□□□□ -2.16
TDA11P38854 SLX9YGR081C 633 nt1.55□□□□□ -2.16
TDA11P38854 TIF11YMR260C 462 nt1.55□□□□□ -2.16
TDA11P38854 YCR043CYCR043C 384 nt1.54□□□□□ -2.16
TDA11P38854 RPL37AYLR185W 267 nt1.54□□□□□ -2.16
TDA11P38854 GPX2YBR244W 489 nt1.54□□□□□ -2.16
TDA11P38854 VPS52YDR484W 1926 nt1.54□□□□□ -2.16
TDA11P38854 FYV8YGR196C 2454 nt1.54□□□□□ -2.16
TDA11P38854 SPC110YDR356W 2835 nt1.53□□□□□ -2.16
TDA11P38854 PAU3YCR104W 375 nt1.53□□□□□ -2.16
TDA11P38854 YDL041WYDL041W 354 nt1.53□□□□□ -2.16
TDA11P38854 RTR2YDR066C 591 nt1.53□□□□□ -2.16
TDA11P38854 LSO2YGR169C-A 279 nt1.53□□□□□ -2.16
TDA11P38854 YKL023C-AYKL023C-A 228 nt1.53□□□□□ -2.16
TDA11P38854 COA6YMR244C-A 315 nt1.53□□□□□ -2.16
TDA11P38854 LYS9YNR050C 1341 nt1.53□□□□□ -2.16
TDA11P38854 MDM20YOL076W 2391 nt1.53□□□□□ -2.16
TDA11P38854 TFC8YPL007C 1767 nt1.53□□□□□ -2.16
TDA11P38854 YPL197CYPL197C 414 nt1.53□□□□□ -2.16
TDA11P38854 IRA1YBR140C 9279 nt1.52□□□□□ -2.17
TDA11P38854 IRR1YIL026C 3453 nt1.52□□□□□ -2.17
TDA11P38854 NOT5YPR072W 1683 nt1.52□□□□□ -2.17
TDA11P38854 YER088C-AYER088C-A 324 nt1.52□□□□□ -2.17
TDA11P38854 tT(UGU)Q1tT(UGU)Q1 76 nt1.52□□□□□ -2.17
TDA11P38854 RCN1YKL159C 636 nt1.52□□□□□ -2.17
TDA11P38854 IRC19YLL033W 693 nt1.52□□□□□ -2.17
TDA11P38854 SEN15YMR059W 387 nt1.52□□□□□ -2.17
TDA11P38854 YBL083CYBL083C 426 nt1.52□□□□□ -2.17
TDA11P38854 YOR146WYOR146W 306 nt1.52□□□□□ -2.17
TDA11P38854 SAR1YPL218W 573 nt1.52□□□□□ -2.17
TDA11P38854 SEC63YOR254C 1992 nt1.52□□□□□ -2.17
TDA11P38854 CFT1YDR301W 4074 nt1.51□□□□□ -2.17
TDA11P38854 PIK1YNL267W 3201 nt1.51□□□□□ -2.17
TDA11P38854 YDL016CYDL016C 303 nt1.51□□□□□ -2.17
TDA11P38854 OCA6YDR067C 675 nt1.51□□□□□ -2.17
TDA11P38854 YHL037CYHL037C 402 nt1.51□□□□□ -2.17
TDA11P38854 YIL029CYIL029C 429 nt1.51□□□□□ -2.17
TDA11P38854 YJR140W-AYJR140W-A 150 nt1.51□□□□□ -2.17
TDA11P38854 YMR230W-AYMR230W-A 189 nt1.51□□□□□ -2.17
TDA11P38854 UTP13YLR222C 2454 nt1.51□□□□□ -2.17
TDA11P38854 HSL1YKL101W 4557 nt1.5□□□□□ -2.17
TDA11P38854 CDC24YAL041W 2565 nt1.5□□□□□ -2.17
TDA11P38854 RBK1YCR036W 1002 nt1.5□□□□□ -2.17
TDA11P38854 YGR283CYGR283C 1026 nt1.5□□□□□ -2.17
TDA11P38854 GIC1YHR061C 945 nt1.5□□□□□ -2.17
TDA11P38854 YJR079WYJR079W 330 nt1.5□□□□□ -2.17
TDA11P38854 TRX1YLR043C 312 nt1.5□□□□□ -2.17
TDA11P38854 MSC6YOR354C 2079 nt1.5□□□□□ -2.17
TDA11P38854 SKI3YPR189W 4299 nt1.5□□□□□ -2.17
TDA11P38854 ZRG8YER033C 3231 nt1.49□□□□□ -2.17
TDA11P38854 SPO13YHR014W 876 nt1.49□□□□□ -2.17
TDA11P38854 AFB1YLR040C 675 nt1.49□□□□□ -2.17
TDA11P38854 YBR224WYBR224W 516 nt1.49□□□□□ -2.17
TDA11P38854 TRM732YMR259C 4263 nt1.49□□□□□ -2.17
TDA11P38854 SGD1YLR336C 2700 nt1.48□□□□□ -2.17
TDA11P38854 KAR3YPR141C 2190 nt1.48□□□□□ -2.17
TDA11P38854 ASM4YDL088C 1587 nt1.48□□□□□ -2.17
TDA11P38854 YER121WYER121W 345 nt1.48□□□□□ -2.17
TDA11P38854 RPC10YHR143W-A 213 nt1.48□□□□□ -2.17
TDA11P38854 YJR141WYJR141W 1044 nt1.48□□□□□ -2.17
TDA11P38854 CTK3YML112W 891 nt1.48□□□□□ -2.17
TDA11P38854 MEC1YBR136W 7107 nt1.48□□□□□ -2.17
TDA11P38854 TRM3YDL112W 4311 nt1.48□□□□□ -2.17
TDA11P38854 KAP122YGL016W 3246 nt1.47□□□□□ -2.17
TDA11P38854 SPC1YJR010C-A 285 nt1.47□□□□□ -2.17
TDA11P38854 ABM1YJR108W 372 nt1.47□□□□□ -2.17
TDA11P38854 YKL044WYKL044W 321 nt1.47□□□□□ -2.17
TDA11P38854 COX7YMR256C 183 nt1.47□□□□□ -2.17
TDA11P38854 CMC2YBL059C-A 330 nt1.47□□□□□ -2.17
TDA11P38854 SEY1YOR165W 2331 nt1.47□□□□□ -2.17
TDA11P38854 YHR214C-CYHR214C-C 1437 nt1.47□□□□□ -2.17
TDA11P38854 IES5YER092W 378 nt1.46□□□□□ -2.18
TDA11P38854 YGR250CYGR250C 2346 nt1.45□□□□□ -2.18
TDA11P38854 HMI1YOL095C 2121 nt1.45□□□□□ -2.18
TDA11P38854 CTF4YPR135W 2784 nt1.45□□□□□ -2.18
TDA11P38854 PEP3YLR148W 2757 nt1.45□□□□□ -2.18
TDA11P38854 MNL2YLR057W 2550 nt1.44□□□□□ -2.18
TDA11P38854 YKL123WYKL123W 381 nt1.44□□□□□ -2.18
TDA11P38854 GMC2YLR445W 567 nt1.44□□□□□ -2.18
TDA11P38854 MEI5YPL121C 669 nt1.44□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 26.9 ms