Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 RIF1YBR275C 5751 nt3.32□□□□□ -1.88
VPS35P34110 YHL041WYHL041W 450 nt3.32□□□□□ -1.88
VPS35P34110 YIL059CYIL059C 366 nt3.32□□□□□ -1.88
VPS35P34110 GRX8YLR364W 330 nt3.32□□□□□ -1.88
VPS35P34110 MRPL33YMR286W 261 nt3.32□□□□□ -1.88
VPS35P34110 YMR307C-AYMR307C-A 195 nt3.32□□□□□ -1.88
VPS35P34110 NCL1YBL024W 2055 nt3.32□□□□□ -1.88
VPS35P34110 DRS2YAL026C 4068 nt3.31□□□□□ -1.88
VPS35P34110 NET1YJL076W 3570 nt3.31□□□□□ -1.88
VPS35P34110 RRM3YHR031C 2172 nt3.31□□□□□ -1.88
VPS35P34110 YLR053CYLR053C 327 nt3.31□□□□□ -1.88
VPS35P34110 YOL155W-AYOL155W-A 135 nt3.31□□□□□ -1.88
VPS35P34110 ROG1YGL144C 2058 nt3.31□□□□□ -1.88
VPS35P34110 SGD1YLR336C 2700 nt3.3□□□□□ -1.88
VPS35P34110 SNQ2YDR011W 4506 nt3.3□□□□□ -1.88
VPS35P34110 tQ(UUG)BtQ(UUG)B 72 nt3.3□□□□□ -1.88
VPS35P34110 RIM20YOR275C 1986 nt3.3□□□□□ -1.88
VPS35P34110 COG8YML071C 1824 nt3.3□□□□□ -1.88
VPS35P34110 PTC5YOR090C 1719 nt3.3□□□□□ -1.88
VPS35P34110 DYN2YDR424C 279 nt3.29□□□□□ -1.88
VPS35P34110 APQ12YIL040W 417 nt3.29□□□□□ -1.88
VPS35P34110 SKP2YNL311C 2292 nt3.29□□□□□ -1.88
VPS35P34110 MDM1YML104C 3384 nt3.29□□□□□ -1.88
VPS35P34110 KSP1YHR082C 3090 nt3.28□□□□□ -1.88
VPS35P34110 UBP11YKR098C 2154 nt3.28□□□□□ -1.88
VPS35P34110 YGL069CYGL069C 465 nt3.28□□□□□ -1.88
VPS35P34110 YLR154W-EYLR154W-E 204 nt3.28□□□□□ -1.88
VPS35P34110 YBR064WYBR064W 429 nt3.28□□□□□ -1.88
VPS35P34110 YPR089WYPR089W 2667 nt3.28□□□□□ -1.88
VPS35P34110 MBB1YJL199C 327 nt3.27□□□□□ -1.89
VPS35P34110 CHS2YBR038W 2892 nt3.27□□□□□ -1.89
VPS35P34110 BCH1YMR237W 2175 nt3.27□□□□□ -1.89
VPS35P34110 DFG16YOR030W 1860 nt3.26□□□□□ -1.89
VPS35P34110 HHT1YBR010W 411 nt3.26□□□□□ -1.89
VPS35P34110 KEL2YGR238C 2649 nt3.26□□□□□ -1.89
VPS35P34110 ROM1YGR070W 3468 nt3.26□□□□□ -1.89
VPS35P34110 PAN3YKL025C 2040 nt3.26□□□□□ -1.89
VPS35P34110 NMD2YHR077C 3270 nt3.25□□□□□ -1.89
VPS35P34110 SNU114YKL173W 3027 nt3.25□□□□□ -1.89
VPS35P34110 YME2YMR302C 2553 nt3.25□□□□□ -1.89
VPS35P34110 TSC11YER093C 4293 nt3.25□□□□□ -1.89
VPS35P34110 YHL005CYHL005C 393 nt3.25□□□□□ -1.89
VPS35P34110 RPL38YLR325C 237 nt3.25□□□□□ -1.89
VPS35P34110 YCL023CYCL023C 348 nt3.25□□□□□ -1.89
VPS35P34110 VPS35YJL154C 2835 nt3.25□□□□□ -1.89
VPS35P34110 POL2YNL262W 6669 nt3.25□□□□□ -1.89
VPS35P34110 PRP6YBR055C 2700 nt3.24□□□□□ -1.89
VPS35P34110 IKI3YLR384C 4050 nt3.24□□□□□ -1.89
VPS35P34110 TOF2YKR010C 2316 nt3.24□□□□□ -1.89
VPS35P34110 NPC2YDL046W 522 nt3.24□□□□□ -1.89
VPS35P34110 COA4YLR218C 453 nt3.24□□□□□ -1.89
VPS35P34110 RPL6AYML073C 531 nt3.24□□□□□ -1.89
VPS35P34110 FPR1YNL135C 345 nt3.24□□□□□ -1.89
VPS35P34110 SNC2YOR327C 348 nt3.24□□□□□ -1.89
VPS35P34110 RPS12YOR369C 432 nt3.24□□□□□ -1.89
VPS35P34110 RRP12YPL012W 3687 nt3.24□□□□□ -1.89
VPS35P34110 MAK21YDR060W 3078 nt3.23□□□□□ -1.89
VPS35P34110 HRD3YLR207W 2502 nt3.23□□□□□ -1.89
VPS35P34110 ISD11YER048W-A 285 nt3.23□□□□□ -1.89
VPS35P34110 PAM16YJL104W 450 nt3.23□□□□□ -1.89
VPS35P34110 PHD1YKL043W 1101 nt3.23□□□□□ -1.89
VPS35P34110 YLL032CYLL032C 2478 nt3.23□□□□□ -1.89
VPS35P34110 YML037CYML037C 1023 nt3.23□□□□□ -1.89
VPS35P34110 IES4YOR189W 351 nt3.23□□□□□ -1.89
VPS35P34110 YPR063CYPR063C 423 nt3.23□□□□□ -1.89
VPS35P34110 GUP1YGL084C 1683 nt3.23□□□□□ -1.89
VPS35P34110 ALK2YBL009W 2031 nt3.22□□□□□ -1.89
VPS35P34110 DBP7YKR024C 2229 nt3.22□□□□□ -1.89
VPS35P34110 HDA3YPR179C 1968 nt3.21□□□□□ -1.89
VPS35P34110 DUG2YBR281C 2637 nt3.21□□□□□ -1.9
VPS35P34110 RPA34YJL148W 702 nt3.21□□□□□ -1.9
VPS35P34110 YJL182CYJL182C 318 nt3.21□□□□□ -1.9
VPS35P34110 RPL20AYMR242C 519 nt3.21□□□□□ -1.9
VPS35P34110 BFA1YJR053W 1725 nt3.21□□□□□ -1.9
VPS35P34110 snR55snR55 98 nt3.2□□□□□ -1.9
VPS35P34110 FMP16YDR070C 282 nt3.2□□□□□ -1.9
VPS35P34110 RPL23BYER117W 414 nt3.2□□□□□ -1.9
VPS35P34110 PRE4YFR050C 801 nt3.2□□□□□ -1.9
VPS35P34110 SMD1YGR074W 441 nt3.2□□□□□ -1.9
VPS35P34110 YJL197C-AYJL197C-A 282 nt3.2□□□□□ -1.9
VPS35P34110 PCC1YKR095W-A 267 nt3.2□□□□□ -1.9
VPS35P34110 COX14YML129C 213 nt3.2□□□□□ -1.9
VPS35P34110 VMA9YCL005W-A 222 nt3.2□□□□□ -1.9
VPS35P34110 TMN3YER113C 2121 nt3.2□□□□□ -1.9
VPS35P34110 snR60snR60 104 nt3.19□□□□□ -1.9
VPS35P34110 BPT1YLL015W 4680 nt3.19□□□□□ -1.9
VPS35P34110 SOK2YMR016C 2358 nt3.18□□□□□ -1.9
VPS35P34110 HEH2YDR458C 1992 nt3.18□□□□□ -1.9
VPS35P34110 ECM21YBL101C 3354 nt3.18□□□□□ -1.9
VPS35P34110 Q0092Q0092 141 nt3.18□□□□□ -1.9
VPS35P34110 YIL169CYIL169C 2988 nt3.18□□□□□ -1.9
VPS35P34110 YML007C-AYML007C-A 111 nt3.18□□□□□ -1.9
VPS35P34110 NPR2YEL062W 1848 nt3.18□□□□□ -1.9
VPS35P34110 KAP104YBR017C 2757 nt3.17□□□□□ -1.9
VPS35P34110 YBT1YLL048C 4986 nt3.17□□□□□ -1.9
VPS35P34110 GCV2YMR189W 3105 nt3.17□□□□□ -1.9
VPS35P34110 NOP10YHR072W-A 177 nt3.17□□□□□ -1.9
VPS35P34110 CYB5YNL111C 363 nt3.17□□□□□ -1.9
VPS35P34110 SCW11YGL028C 1629 nt3.17□□□□□ -1.9
VPS35P34110 FIR1YER032W 2631 nt3.17□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 22.7 ms