Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 YDL041WYDL041W 354 nt1.59□□□□□ -2.15
RPB9P27999 snR79snR79 84 nt1.59□□□□□ -2.15
RPB9P27999 YEL030C-AYEL030C-A 315 nt1.59□□□□□ -2.15
RPB9P27999 YOR248WYOR248W 303 nt1.59□□□□□ -2.15
RPB9P27999 USO1YDL058W 5373 nt1.59□□□□□ -2.16
RPB9P27999 CHC1YGL206C 4962 nt1.59□□□□□ -2.16
RPB9P27999 VMR1YHL035C 4779 nt1.59□□□□□ -2.16
RPB9P27999 YSW1YBR148W 1830 nt1.59□□□□□ -2.16
RPB9P27999 SHE9YDR393W 1371 nt1.59□□□□□ -2.16
RPB9P27999 FKS1YLR342W 5631 nt1.58□□□□□ -2.16
RPB9P27999 DNF1YER166W 4716 nt1.58□□□□□ -2.16
RPB9P27999 HMLALPHA2YCL067C 633 nt1.58□□□□□ -2.16
RPB9P27999 RVS161YCR009C 798 nt1.58□□□□□ -2.16
RPB9P27999 MATALPHA2YCR039C 633 nt1.58□□□□□ -2.16
RPB9P27999 YHR071C-AYHR071C-A 321 nt1.58□□□□□ -2.16
RPB9P27999 YHR125WYHR125W 306 nt1.58□□□□□ -2.16
RPB9P27999 AIM29YKR074W 468 nt1.58□□□□□ -2.16
RPB9P27999 SYM1YLR251W 594 nt1.58□□□□□ -2.16
RPB9P27999 SEC22YLR268W 645 nt1.58□□□□□ -2.16
RPB9P27999 YLR269CYLR269C 351 nt1.58□□□□□ -2.16
RPB9P27999 YMR052C-AYMR052C-A 366 nt1.58□□□□□ -2.16
RPB9P27999 VPS20YMR077C 666 nt1.58□□□□□ -2.16
RPB9P27999 YOR032W-AYOR032W-A 201 nt1.58□□□□□ -2.16
RPB9P27999 MF(ALPHA)1YPL187W 498 nt1.58□□□□□ -2.16
RPB9P27999 YPR039WYPR039W 336 nt1.58□□□□□ -2.16
RPB9P27999 snR41snR41 95 nt1.58□□□□□ -2.16
RPB9P27999 DNF3YMR162C 4971 nt1.58□□□□□ -2.16
RPB9P27999 SGD1YLR336C 2700 nt1.58□□□□□ -2.16
RPB9P27999 NOP14YDL148C 2433 nt1.57□□□□□ -2.16
RPB9P27999 ASM4YDL088C 1587 nt1.57□□□□□ -2.16
RPB9P27999 YCR001WYCR001W 315 nt1.57□□□□□ -2.16
RPB9P27999 ATP17YDR377W 306 nt1.57□□□□□ -2.16
RPB9P27999 NBL1YHR199C-A 222 nt1.57□□□□□ -2.16
RPB9P27999 VPS8YAL002W 3825 nt1.57□□□□□ -2.16
RPB9P27999 YKR075W-AYKR075W-A 270 nt1.57□□□□□ -2.16
RPB9P27999 TOM22YNL131W 459 nt1.57□□□□□ -2.16
RPB9P27999 snR54snR54 86 nt1.57□□□□□ -2.16
RPB9P27999 UBR2YLR024C 5619 nt1.57□□□□□ -2.16
RPB9P27999 IRC8YJL051W 2469 nt1.57□□□□□ -2.16
RPB9P27999 HER1YOR227W 3741 nt1.56□□□□□ -2.16
RPB9P27999 IST2YBR086C 2841 nt1.56□□□□□ -2.16
RPB9P27999 INO80YGL150C 4470 nt1.56□□□□□ -2.16
RPB9P27999 UFD4YKL010C 4452 nt1.56□□□□□ -2.16
RPB9P27999 GPX2YBR244W 489 nt1.56□□□□□ -2.16
RPB9P27999 MNL2YLR057W 2550 nt1.56□□□□□ -2.16
RPB9P27999 MET18YIL128W 3099 nt1.56□□□□□ -2.16
RPB9P27999 YDR341CYDR341C 1824 nt1.56□□□□□ -2.16
RPB9P27999 STB4YMR019W 2850 nt1.56□□□□□ -2.16
RPB9P27999 RUD3YOR216C 1455 nt1.56□□□□□ -2.16
RPB9P27999 NAM7YMR080C 2916 nt1.55□□□□□ -2.16
RPB9P27999 YER068C-AYER068C-A 432 nt1.55□□□□□ -2.16
RPB9P27999 HOP2YGL033W 657 nt1.55□□□□□ -2.16
RPB9P27999 YGR025WYGR025W 303 nt1.55□□□□□ -2.16
RPB9P27999 YJL007CYJL007C 315 nt1.55□□□□□ -2.16
RPB9P27999 YAL059C-AYAL059C-A 423 nt1.55□□□□□ -2.16
RPB9P27999 YBL012CYBL012C 402 nt1.55□□□□□ -2.16
RPB9P27999 snR13snR13 124 nt1.55□□□□□ -2.16
RPB9P27999 CDC27YBL084C 2277 nt1.55□□□□□ -2.16
RPB9P27999 RTT107YHR154W 3213 nt1.55□□□□□ -2.16
RPB9P27999 VPS35YJL154C 2835 nt1.54□□□□□ -2.16
RPB9P27999 IES5YER092W 378 nt1.54□□□□□ -2.16
RPB9P27999 YGL069CYGL069C 465 nt1.54□□□□□ -2.16
RPB9P27999 YMR153C-AYMR153C-A 336 nt1.54□□□□□ -2.16
RPB9P27999 MYO2YOR326W 4725 nt1.54□□□□□ -2.16
RPB9P27999 NOT5YPR072W 1683 nt1.54□□□□□ -2.16
RPB9P27999 SMY1YKL079W 1971 nt1.54□□□□□ -2.16
RPB9P27999 NEO1YIL048W 3456 nt1.53□□□□□ -2.16
RPB9P27999 FIG2YCR089W 4830 nt1.53□□□□□ -2.16
RPB9P27999 COX1Q0045 1605 nt1.53□□□□□ -2.16
RPB9P27999 YDR286CYDR286C 345 nt1.53□□□□□ -2.16
RPB9P27999 RPL37BYDR500C 267 nt1.53□□□□□ -2.16
RPB9P27999 YER006C-AYER006C-A 318 nt1.53□□□□□ -2.16
RPB9P27999 SPO22YIL073C 2928 nt1.53□□□□□ -2.16
RPB9P27999 MYO4YAL029C 4416 nt1.53□□□□□ -2.16
RPB9P27999 YLR053CYLR053C 327 nt1.53□□□□□ -2.16
RPB9P27999 YOR343W-BYOR343W-B 5313 nt1.53□□□□□ -2.16
RPB9P27999 YOR392WYOR392W 444 nt1.53□□□□□ -2.16
RPB9P27999 YPL205CYPL205C 345 nt1.53□□□□□ -2.16
RPB9P27999 YPR146CYPR146C 330 nt1.53□□□□□ -2.16
RPB9P27999 DIS3YOL021C 3006 nt1.53□□□□□ -2.17
RPB9P27999 MGM1YOR211C 2646 nt1.53□□□□□ -2.17
RPB9P27999 SYH1YPL105C 2550 nt1.53□□□□□ -2.17
RPB9P27999 YLR422WYLR422W 5799 nt1.52□□□□□ -2.17
RPB9P27999 AGC1YPR021C 2709 nt1.52□□□□□ -2.17
RPB9P27999 YDL062WYDL062W 426 nt1.52□□□□□ -2.17
RPB9P27999 YGL024WYGL024W 336 nt1.52□□□□□ -2.17
RPB9P27999 YML084WYML084W 309 nt1.52□□□□□ -2.17
RPB9P27999 CMC2YBL059C-A 330 nt1.52□□□□□ -2.17
RPB9P27999 YOR394C-AYOR394C-A 168 nt1.52□□□□□ -2.17
RPB9P27999 CAT2YML042W 2013 nt1.52□□□□□ -2.17
RPB9P27999 YMR045CYMR045C 5268 nt1.52□□□□□ -2.17
RPB9P27999 SCH9YHR205W 2475 nt1.51□□□□□ -2.17
RPB9P27999 UBP2YOR124C 3819 nt1.51□□□□□ -2.17
RPB9P27999 YFR016CYFR016C 3702 nt1.51□□□□□ -2.17
RPB9P27999 SET2YJL168C 2202 nt1.51□□□□□ -2.17
RPB9P27999 YHR139C-AYHR139C-A 312 nt1.51□□□□□ -2.17
RPB9P27999 HSK3YKL138C-A 210 nt1.51□□□□□ -2.17
RPB9P27999 TEN1YLR010C 483 nt1.51□□□□□ -2.17
RPB9P27999 RPS18BYML026C 441 nt1.51□□□□□ -2.17
RPB9P27999 DGR1YNL130C-A 147 nt1.51□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 125.8 ms