Protein–RNA interactions for Protein: P25694

CDC48, Cell division control protein 48, yeastyeast

Known RBP Predictions only

Length 835 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC48P25694 tW(CCA)G2tW(CCA)G2 72 nt3.03□□□□□ -1.92
CDC48P25694 tW(CCA)JtW(CCA)J 72 nt3.03□□□□□ -1.92
CDC48P25694 tW(CCA)KtW(CCA)K 72 nt3.03□□□□□ -1.92
CDC48P25694 tW(CCA)MtW(CCA)M 72 nt3.03□□□□□ -1.92
CDC48P25694 tW(CCA)PtW(CCA)P 72 nt3.03□□□□□ -1.92
CDC48P25694 SAP1YER047C 2694 nt3.02□□□□□ -1.93
CDC48P25694 PRE4YFR050C 801 nt3.02□□□□□ -1.93
CDC48P25694 PNC1YGL037C 651 nt3.02□□□□□ -1.93
CDC48P25694 YGR069WYGR069W 336 nt3.02□□□□□ -1.93
CDC48P25694 LSO2YGR169C-A 279 nt3.02□□□□□ -1.93
CDC48P25694 YPR203WYPR203W 309 nt3.02□□□□□ -1.93
CDC48P25694 FLO11YIR019C 4104 nt3.02□□□□□ -1.93
CDC48P25694 DNA2YHR164C 4569 nt3.02□□□□□ -1.93
CDC48P25694 QCR7YDR529C 384 nt3.01□□□□□ -1.93
CDC48P25694 HTB2YBL002W 396 nt3.01□□□□□ -1.93
CDC48P25694 YBR197CYBR197C 654 nt3.01□□□□□ -1.93
CDC48P25694 GIN4YDR507C 3429 nt3.01□□□□□ -1.93
CDC48P25694 KAR3YPR141C 2190 nt3□□□□□ -1.93
CDC48P25694 YMR046W-AYMR046W-A 129 nt3□□□□□ -1.93
CDC48P25694 MET6YER091C 2304 nt2.99□□□□□ -1.93
CDC48P25694 CDC20YGL116W 1833 nt2.99□□□□□ -1.93
CDC48P25694 YDR048CYDR048C 315 nt2.99□□□□□ -1.93
CDC48P25694 YGL007C-AYGL007C-A 87 nt2.99□□□□□ -1.93
CDC48P25694 ALG13YGL047W 609 nt2.99□□□□□ -1.93
CDC48P25694 RGM1YMR182C 636 nt2.99□□□□□ -1.93
CDC48P25694 YNL010WYNL010W 726 nt2.99□□□□□ -1.93
CDC48P25694 MF(ALPHA)1YPL187W 498 nt2.99□□□□□ -1.93
CDC48P25694 RPL36BYPL249C-A 303 nt2.99□□□□□ -1.93
CDC48P25694 TOM1YDR457W 9807 nt2.99□□□□□ -1.93
CDC48P25694 YJL070CYJL070C 2667 nt2.99□□□□□ -1.93
CDC48P25694 IPT1YDR072C 1584 nt2.99□□□□□ -1.93
CDC48P25694 NUP120YKL057C 3114 nt2.99□□□□□ -1.93
CDC48P25694 MMS1YPR164W 4224 nt2.98□□□□□ -1.93
CDC48P25694 DIS3YOL021C 3006 nt2.98□□□□□ -1.93
CDC48P25694 BAS1YKR099W 2436 nt2.98□□□□□ -1.93
CDC48P25694 YDL211CYDL211C 1119 nt2.98□□□□□ -1.93
CDC48P25694 YDR098C-BYDR098C-B 5268 nt2.98□□□□□ -1.93
CDC48P25694 YDR210C-DYDR210C-D 5268 nt2.98□□□□□ -1.93
CDC48P25694 YDR316W-BYDR316W-B 5268 nt2.98□□□□□ -1.93
CDC48P25694 YDR365W-BYDR365W-B 5268 nt2.98□□□□□ -1.93
CDC48P25694 YER138CYER138C 5268 nt2.98□□□□□ -1.93
CDC48P25694 YER160CYER160C 5268 nt2.98□□□□□ -1.93
CDC48P25694 YGR038C-BYGR038C-B 5268 nt2.98□□□□□ -1.93
CDC48P25694 YGR161C-DYGR161C-D 5268 nt2.98□□□□□ -1.93
CDC48P25694 YJR027WYJR027W 5268 nt2.98□□□□□ -1.93
CDC48P25694 YLR157C-BYLR157C-B 5268 nt2.98□□□□□ -1.93
CDC48P25694 YML039WYML039W 5268 nt2.98□□□□□ -1.93
CDC48P25694 YML045WYML045W 5268 nt2.98□□□□□ -1.93
CDC48P25694 YMR050CYMR050C 5268 nt2.98□□□□□ -1.93
CDC48P25694 YOL103W-BYOL103W-B 5268 nt2.98□□□□□ -1.93
CDC48P25694 YBR012W-BYBR012W-B 5271 nt2.98□□□□□ -1.93
CDC48P25694 YOR142W-BYOR142W-B 5268 nt2.98□□□□□ -1.93
CDC48P25694 YPL257W-BYPL257W-B 5268 nt2.98□□□□□ -1.93
CDC48P25694 YPR158W-BYPR158W-B 5271 nt2.98□□□□□ -1.93
CDC48P25694 ECM29YHL030W 5607 nt2.97□□□□□ -1.93
CDC48P25694 snR76snR76 109 nt2.97□□□□□ -1.93
CDC48P25694 CDC36YDL165W 576 nt2.97□□□□□ -1.93
CDC48P25694 YGL024WYGL024W 336 nt2.97□□□□□ -1.93
CDC48P25694 RLI1YDR091C 1827 nt2.97□□□□□ -1.93
CDC48P25694 SAK1YER129W 3429 nt2.97□□□□□ -1.93
CDC48P25694 YDL062WYDL062W 426 nt2.96□□□□□ -1.94
CDC48P25694 LSM7YNL147W 348 nt2.96□□□□□ -1.94
CDC48P25694 MPH1YIR002C 2982 nt2.95□□□□□ -1.94
CDC48P25694 DBP6YNR038W 1890 nt2.95□□□□□ -1.94
CDC48P25694 YGL014C-AYGL014C-A 162 nt2.95□□□□□ -1.94
CDC48P25694 RTC6YPL183W-A 282 nt2.95□□□□□ -1.94
CDC48P25694 YDR406W-AYDR406W-A 246 nt2.94□□□□□ -1.94
CDC48P25694 YEL020C-BYEL020C-B 198 nt2.94□□□□□ -1.94
CDC48P25694 YIL102CYIL102C 306 nt2.94□□□□□ -1.94
CDC48P25694 LCL1YPL056C 306 nt2.94□□□□□ -1.94
CDC48P25694 YBL005W-BYBL005W-B 5268 nt2.94□□□□□ -1.94
CDC48P25694 ARP7YPR034W 1434 nt2.93□□□□□ -1.94
CDC48P25694 YPL150WYPL150W 2706 nt2.93□□□□□ -1.94
CDC48P25694 PFF1YBR074W 2931 nt2.93□□□□□ -1.94
CDC48P25694 YDL025W-AYDL025W-A 105 nt2.93□□□□□ -1.94
CDC48P25694 YDR209CYDR209C 414 nt2.93□□□□□ -1.94
CDC48P25694 GRX8YLR364W 330 nt2.93□□□□□ -1.94
CDC48P25694 DAD3YBR233W-A 285 nt2.93□□□□□ -1.94
CDC48P25694 snR49snR49 165 nt2.93□□□□□ -1.94
CDC48P25694 DNL4YOR005C 2835 nt2.93□□□□□ -1.94
CDC48P25694 FKS3YMR306W 5358 nt2.92□□□□□ -1.94
CDC48P25694 NAB3YPL190C 2409 nt2.92□□□□□ -1.94
CDC48P25694 RBK1YCR036W 1002 nt2.92□□□□□ -1.94
CDC48P25694 PHS1YJL097W 654 nt2.92□□□□□ -1.94
CDC48P25694 RPS27AYKL156W 249 nt2.92□□□□□ -1.94
CDC48P25694 RPL36AYMR194W 303 nt2.92□□□□□ -1.94
CDC48P25694 RAD61YDR014W 1944 nt2.91□□□□□ -1.94
CDC48P25694 DUG2YBR281C 2637 nt2.91□□□□□ -1.94
CDC48P25694 MCD1YDL003W 1701 nt2.91□□□□□ -1.94
CDC48P25694 YGL041CYGL041C 204 nt2.91□□□□□ -1.94
CDC48P25694 YAL059C-AYAL059C-A 423 nt2.91□□□□□ -1.94
CDC48P25694 YLR294CYLR294C 330 nt2.91□□□□□ -1.94
CDC48P25694 ABF2YMR072W 552 nt2.91□□□□□ -1.94
CDC48P25694 MRPL33YMR286W 261 nt2.91□□□□□ -1.94
CDC48P25694 SAR1YPL218W 573 nt2.91□□□□□ -1.94
CDC48P25694 NCL1YBL024W 2055 nt2.91□□□□□ -1.94
CDC48P25694 DOT6YER088C 2013 nt2.9□□□□□ -1.94
CDC48P25694 YGR067CYGR067C 2415 nt2.9□□□□□ -1.94
CDC48P25694 UTP14YML093W 2700 nt2.9□□□□□ -1.95
CDC48P25694 YFH1YDL120W 525 nt2.9□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 45.5 ms