Protein–RNA interactions for Protein: P0C2J0

TY1B-PR2, Transposon Ty1-PR2 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,756 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR2P0C2J0 URB1YKL014C 5295 nt0.34□□□□□ -2.36
TY1B-PR2P0C2J0 NUT1YGL151W 3399 nt0.33□□□□□ -2.36
TY1B-PR2P0C2J0 YDR261W-AYDR261W-A 1317 nt0.33□□□□□ -2.36
TY1B-PR2P0C2J0 YFL041W-AYFL041W-A 192 nt0.33□□□□□ -2.36
TY1B-PR2P0C2J0 RPL9AYGL147C 576 nt0.33□□□□□ -2.36
TY1B-PR2P0C2J0 YIL089WYIL089W 618 nt0.33□□□□□ -2.36
TY1B-PR2P0C2J0 YMR147WYMR147W 672 nt0.33□□□□□ -2.36
TY1B-PR2P0C2J0 DAS1YJL149W 1992 nt0.33□□□□□ -2.36
TY1B-PR2P0C2J0 NUP120YKL057C 3114 nt0.33□□□□□ -2.36
TY1B-PR2P0C2J0 YDR381C-AYDR381C-A 345 nt0.32□□□□□ -2.36
TY1B-PR2P0C2J0 ICS2YBR157C 768 nt0.32□□□□□ -2.36
TY1B-PR2P0C2J0 STB6YKL072W 2301 nt0.32□□□□□ -2.36
TY1B-PR2P0C2J0 NUP188YML103C 4968 nt0.32□□□□□ -2.36
TY1B-PR2P0C2J0 ECM12YHR021W-A 456 nt0.32□□□□□ -2.36
TY1B-PR2P0C2J0 YIL141WYIL141W 390 nt0.32□□□□□ -2.36
TY1B-PR2P0C2J0 FYV6YNL133C 522 nt0.32□□□□□ -2.36
TY1B-PR2P0C2J0 SFM1YOR021C 642 nt0.32□□□□□ -2.36
TY1B-PR2P0C2J0 FMP23YBR047W 528 nt0.32□□□□□ -2.36
TY1B-PR2P0C2J0 MDM36YPR083W 1740 nt0.31□□□□□ -2.36
TY1B-PR2P0C2J0 MEI4YER044C-A 1227 nt0.31□□□□□ -2.36
TY1B-PR2P0C2J0 TCA17YEL048C 459 nt0.3□□□□□ -2.36
TY1B-PR2P0C2J0 PEX15YOL044W 1152 nt0.3□□□□□ -2.36
TY1B-PR2P0C2J0 YHL012WYHL012W 1482 nt0.3□□□□□ -2.36
TY1B-PR2P0C2J0 BPH1YCR032W 6504 nt0.3□□□□□ -2.36
TY1B-PR2P0C2J0 MSC6YOR354C 2079 nt0.3□□□□□ -2.36
TY1B-PR2P0C2J0 RPI1YIL119C 1224 nt0.29□□□□□ -2.36
TY1B-PR2P0C2J0 COF1YLL050C 432 nt0.29□□□□□ -2.36
TY1B-PR2P0C2J0 YET2YMR040W 483 nt0.29□□□□□ -2.36
TY1B-PR2P0C2J0 SWS2YNL081C 432 nt0.29□□□□□ -2.36
TY1B-PR2P0C2J0 AHC2YCR082W 387 nt0.29□□□□□ -2.36
TY1B-PR2P0C2J0 AI3Q0060 1248 nt0.29□□□□□ -2.36
TY1B-PR2P0C2J0 NOP10YHR072W-A 177 nt0.29□□□□□ -2.36
TY1B-PR2P0C2J0 RPL40BYKR094C 387 nt0.29□□□□□ -2.36
TY1B-PR2P0C2J0 NGG1YDR176W 2109 nt0.28□□□□□ -2.36
TY1B-PR2P0C2J0 SLY1YDR189W 2001 nt0.28□□□□□ -2.37
TY1B-PR2P0C2J0 SWT1YOR166C 1377 nt0.27□□□□□ -2.37
TY1B-PR2P0C2J0 MZM1YDR493W 372 nt0.27□□□□□ -2.37
TY1B-PR2P0C2J0 YGL109WYGL109W 324 nt0.27□□□□□ -2.37
TY1B-PR2P0C2J0 YAR053WYAR053W 297 nt0.27□□□□□ -2.37
TY1B-PR2P0C2J0 YOR376WYOR376W 369 nt0.27□□□□□ -2.37
TY1B-PR2P0C2J0 YDL157CYDL157C 357 nt0.27□□□□□ -2.37
TY1B-PR2P0C2J0 SAY1YGR263C 1275 nt0.27□□□□□ -2.37
TY1B-PR2P0C2J0 YJL127C-BYJL127C-B 159 nt0.27□□□□□ -2.37
TY1B-PR2P0C2J0 RAD10YML095C 633 nt0.27□□□□□ -2.37
TY1B-PR2P0C2J0 YNL226WYNL226W 411 nt0.27□□□□□ -2.37
TY1B-PR2P0C2J0 MIX23YBL107C 591 nt0.27□□□□□ -2.37
TY1B-PR2P0C2J0 MFA1YDR461W 111 nt0.26□□□□□ -2.37
TY1B-PR2P0C2J0 YPL135C-AYPL135C-A 174 nt0.26□□□□□ -2.37
TY1B-PR2P0C2J0 SLX4YLR135W 2247 nt0.26□□□□□ -2.37
TY1B-PR2P0C2J0 BFA1YJR053W 1725 nt0.25□□□□□ -2.37
TY1B-PR2P0C2J0 GIC1YHR061C 945 nt0.25□□□□□ -2.37
TY1B-PR2P0C2J0 RRT16YNL105W 429 nt0.25□□□□□ -2.37
TY1B-PR2P0C2J0 GDS1YOR355W 1569 nt0.25□□□□□ -2.37
TY1B-PR2P0C2J0 FUS2YMR232W 2034 nt0.25□□□□□ -2.37
TY1B-PR2P0C2J0 NOP12YOL041C 1380 nt0.25□□□□□ -2.37
TY1B-PR2P0C2J0 FAR7YFR008W 666 nt0.24□□□□□ -2.37
TY1B-PR2P0C2J0 GRX7YBR014C 612 nt0.24□□□□□ -2.37
TY1B-PR2P0C2J0 ESP1YGR098C 4893 nt0.24□□□□□ -2.37
TY1B-PR2P0C2J0 YGR045CYGR045C 363 nt0.24□□□□□ -2.37
TY1B-PR2P0C2J0 TIF11YMR260C 462 nt0.24□□□□□ -2.37
TY1B-PR2P0C2J0 YPR014CYPR014C 330 nt0.24□□□□□ -2.37
TY1B-PR2P0C2J0 AME1YBR211C 975 nt0.24□□□□□ -2.37
TY1B-PR2P0C2J0 ECM25YJL201W 1800 nt0.24□□□□□ -2.37
TY1B-PR2P0C2J0 YDL025W-AYDL025W-A 105 nt0.23□□□□□ -2.37
TY1B-PR2P0C2J0 MVB12YGR206W 306 nt0.23□□□□□ -2.37
TY1B-PR2P0C2J0 RRP15YPR143W 753 nt0.23□□□□□ -2.37
TY1B-PR2P0C2J0 RIM20YOR275C 1986 nt0.23□□□□□ -2.37
TY1B-PR2P0C2J0 YGL006W-AYGL006W-A 111 nt0.22□□□□□ -2.37
TY1B-PR2P0C2J0 LAG1YHL003C 1236 nt0.22□□□□□ -2.37
TY1B-PR2P0C2J0 YLR458WYLR458W 381 nt0.22□□□□□ -2.37
TY1B-PR2P0C2J0 IRC23YOR044W 474 nt0.22□□□□□ -2.37
TY1B-PR2P0C2J0 SST2YLR452C 2097 nt0.22□□□□□ -2.37
TY1B-PR2P0C2J0 TEX1YNL253W 1269 nt0.22□□□□□ -2.37
TY1B-PR2P0C2J0 IES4YOR189W 351 nt0.22□□□□□ -2.37
TY1B-PR2P0C2J0 YCR090CYCR090C 549 nt0.21□□□□□ -2.38
TY1B-PR2P0C2J0 VMA7YGR020C 357 nt0.21□□□□□ -2.38
TY1B-PR2P0C2J0 EMC5YIL027C 426 nt0.21□□□□□ -2.38
TY1B-PR2P0C2J0 snR13snR13 124 nt0.21□□□□□ -2.38
TY1B-PR2P0C2J0 TSA2YDR453C 591 nt0.2□□□□□ -2.38
TY1B-PR2P0C2J0 SPC2YML055W 537 nt0.2□□□□□ -2.38
TY1B-PR2P0C2J0 YOR053WYOR053W 342 nt0.2□□□□□ -2.38
TY1B-PR2P0C2J0 YBR200W-AYBR200W-A 165 nt0.2□□□□□ -2.38
TY1B-PR2P0C2J0 BRX1YOL077C 876 nt0.19□□□□□ -2.38
TY1B-PR2P0C2J0 HHT1YBR010W 411 nt0.19□□□□□ -2.38
TY1B-PR2P0C2J0 YBR224WYBR224W 516 nt0.19□□□□□ -2.38
TY1B-PR2P0C2J0 SGO1YOR073W 1773 nt0.19□□□□□ -2.38
TY1B-PR2P0C2J0 YPD1YDL235C 504 nt0.19□□□□□ -2.38
TY1B-PR2P0C2J0 YML047W-AYML047W-A 366 nt0.19□□□□□ -2.38
TY1B-PR2P0C2J0 AIM41YOR215C 558 nt0.19□□□□□ -2.38
TY1B-PR2P0C2J0 MLP1YKR095W 5628 nt0.19□□□□□ -2.38
TY1B-PR2P0C2J0 RPL35BYDL136W 363 nt0.18□□□□□ -2.38
TY1B-PR2P0C2J0 MXR1YER042W 555 nt0.18□□□□□ -2.38
TY1B-PR2P0C2J0 YIR020CYIR020C 303 nt0.18□□□□□ -2.38
TY1B-PR2P0C2J0 RSM28YDR494W 1086 nt0.17□□□□□ -2.38
TY1B-PR2P0C2J0 TAD1YGL243W 1203 nt0.17□□□□□ -2.38
TY1B-PR2P0C2J0 HSK3YKL138C-A 210 nt0.17□□□□□ -2.38
TY1B-PR2P0C2J0 MRPL50YNR022C 420 nt0.17□□□□□ -2.38
TY1B-PR2P0C2J0 YGL217CYGL217C 342 nt0.17□□□□□ -2.38
TY1B-PR2P0C2J0 COX6YHR051W 447 nt0.17□□□□□ -2.38
TY1B-PR2P0C2J0 YHR212CYHR212C 336 nt0.17□□□□□ -2.38
Retrieved 100 of 7,029 protein–RNA pairs in 27 ms