Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 NUP120YKL057C 3114 nt1.53□□□□□ -2.16
RAD3P06839 TRX1YLR043C 312 nt1.53□□□□□ -2.16
RAD3P06839 SPC98YNL126W 2541 nt1.53□□□□□ -2.16
RAD3P06839 YBL100W-AYBL100W-A 1317 nt1.53□□□□□ -2.16
RAD3P06839 SPC29YPL124W 762 nt1.53□□□□□ -2.16
RAD3P06839 CSM4YPL200W 471 nt1.53□□□□□ -2.16
RAD3P06839 ROX1YPR065W 1107 nt1.53□□□□□ -2.16
RAD3P06839 YCL020WYCL020W 1317 nt1.53□□□□□ -2.16
RAD3P06839 YDR461C-AYDR461C-A 243 nt1.52□□□□□ -2.17
RAD3P06839 VOA1YGR106C 798 nt1.52□□□□□ -2.17
RAD3P06839 YIL030W-AYIL030W-A 339 nt1.52□□□□□ -2.17
RAD3P06839 NCE101YJL205C 162 nt1.52□□□□□ -2.17
RAD3P06839 YOL029CYOL029C 606 nt1.52□□□□□ -2.17
RAD3P06839 SPO24YPR036W-A 204 nt1.52□□□□□ -2.17
RAD3P06839 YPR096CYPR096C 303 nt1.52□□□□□ -2.17
RAD3P06839 MON2YNL297C 4911 nt1.52□□□□□ -2.17
RAD3P06839 DPB11YJL090C 2295 nt1.51□□□□□ -2.17
RAD3P06839 YDR194W-AYDR194W-A 153 nt1.51□□□□□ -2.17
RAD3P06839 YIR020CYIR020C 303 nt1.51□□□□□ -2.17
RAD3P06839 TIM8YJR135W-A 264 nt1.51□□□□□ -2.17
RAD3P06839 PGA1YNL158W 597 nt1.51□□□□□ -2.17
RAD3P06839 PHO80YOL001W 882 nt1.51□□□□□ -2.17
RAD3P06839 YOR152CYOR152C 771 nt1.51□□□□□ -2.17
RAD3P06839 SNC2YOR327C 348 nt1.51□□□□□ -2.17
RAD3P06839 YPR172WYPR172W 603 nt1.51□□□□□ -2.17
RAD3P06839 YGR109W-BYGR109W-B 4644 nt1.51□□□□□ -2.17
RAD3P06839 SWT1YOR166C 1377 nt1.5□□□□□ -2.17
RAD3P06839 PBY1YBR094W 2262 nt1.5□□□□□ -2.17
RAD3P06839 YDR210W-AYDR210W-A 1317 nt1.5□□□□□ -2.17
RAD3P06839 YOR343W-AYOR343W-A 1317 nt1.5□□□□□ -2.17
RAD3P06839 AHC1YOR023C 1701 nt1.5□□□□□ -2.17
RAD3P06839 RNR4YGR180C 1038 nt1.5□□□□□ -2.17
RAD3P06839 PFD1YJL179W 330 nt1.5□□□□□ -2.17
RAD3P06839 SWS2YNL081C 432 nt1.5□□□□□ -2.17
RAD3P06839 MUD2YKL074C 1584 nt1.5□□□□□ -2.17
RAD3P06839 ADR1YDR216W 3972 nt1.49□□□□□ -2.17
RAD3P06839 CAT8YMR280C 4302 nt1.49□□□□□ -2.17
RAD3P06839 DAS1YJL149W 1992 nt1.49□□□□□ -2.17
RAD3P06839 PIK1YNL267W 3201 nt1.49□□□□□ -2.17
RAD3P06839 SLX9YGR081C 633 nt1.49□□□□□ -2.17
RAD3P06839 GIC1YHR061C 945 nt1.49□□□□□ -2.17
RAD3P06839 CMS1YLR003C 876 nt1.49□□□□□ -2.17
RAD3P06839 YLR271WYLR271W 825 nt1.49□□□□□ -2.17
RAD3P06839 URA10YMR271C 684 nt1.49□□□□□ -2.17
RAD3P06839 YMR324CYMR324C 243 nt1.49□□□□□ -2.17
RAD3P06839 YPL080CYPL080C 327 nt1.49□□□□□ -2.17
RAD3P06839 ZRG8YER033C 3231 nt1.49□□□□□ -2.17
RAD3P06839 HIR3YJR140C 4947 nt1.49□□□□□ -2.17
RAD3P06839 KCS1YDR017C 3153 nt1.49□□□□□ -2.17
RAD3P06839 NOP53YPL146C 1368 nt1.48□□□□□ -2.17
RAD3P06839 MDM20YOL076W 2391 nt1.48□□□□□ -2.17
RAD3P06839 YNL146C-AYNL146C-A 195 nt1.48□□□□□ -2.17
RAD3P06839 NUP82YJL061W 2142 nt1.48□□□□□ -2.17
RAD3P06839 ASM4YDL088C 1587 nt1.47□□□□□ -2.17
RAD3P06839 SKI3YPR189W 4299 nt1.47□□□□□ -2.17
RAD3P06839 YCR102W-AYCR102W-A 198 nt1.47□□□□□ -2.17
RAD3P06839 YKL123WYKL123W 381 nt1.47□□□□□ -2.17
RAD3P06839 RTC6YPL183W-A 282 nt1.47□□□□□ -2.17
RAD3P06839 AFR1YDR085C 1863 nt1.47□□□□□ -2.17
RAD3P06839 YDL016CYDL016C 303 nt1.46□□□□□ -2.18
RAD3P06839 BNA7YDR428C 786 nt1.46□□□□□ -2.18
RAD3P06839 TIF11YMR260C 462 nt1.46□□□□□ -2.18
RAD3P06839 CMC2YBL059C-A 330 nt1.46□□□□□ -2.18
RAD3P06839 COX1Q0045 1605 nt1.45□□□□□ -2.18
RAD3P06839 LRP1YHR081W 555 nt1.45□□□□□ -2.18
RAD3P06839 HUG1YML058W-A 207 nt1.45□□□□□ -2.18
RAD3P06839 RPB11YOL005C 363 nt1.45□□□□□ -2.18
RAD3P06839 GPX2YBR244W 489 nt1.45□□□□□ -2.18
RAD3P06839 SXM1YDR395W 2835 nt1.45□□□□□ -2.18
RAD3P06839 MDM32YOR147W 1869 nt1.45□□□□□ -2.18
RAD3P06839 YGR130CYGR130C 2451 nt1.45□□□□□ -2.18
RAD3P06839 YSW1YBR148W 1830 nt1.45□□□□□ -2.18
RAD3P06839 MNL2YLR057W 2550 nt1.45□□□□□ -2.18
RAD3P06839 YGL015CYGL015C 393 nt1.44□□□□□ -2.18
RAD3P06839 VMA21YGR105W 234 nt1.44□□□□□ -2.18
RAD3P06839 HMI1YOL095C 2121 nt1.44□□□□□ -2.18
RAD3P06839 BI4Q0120 1917 nt1.44□□□□□ -2.18
RAD3P06839 YLR149CYLR149C 2193 nt1.44□□□□□ -2.18
RAD3P06839 YGR250CYGR250C 2346 nt1.43□□□□□ -2.18
RAD3P06839 NOT5YPR072W 1683 nt1.43□□□□□ -2.18
RAD3P06839 YCR043CYCR043C 384 nt1.43□□□□□ -2.18
RAD3P06839 YDL068WYDL068W 330 nt1.43□□□□□ -2.18
RAD3P06839 CDC36YDL165W 576 nt1.43□□□□□ -2.18
RAD3P06839 YDR220CYDR220C 294 nt1.43□□□□□ -2.18
RAD3P06839 YEL018C-AYEL018C-A 534 nt1.43□□□□□ -2.18
RAD3P06839 YER088C-AYER088C-A 324 nt1.43□□□□□ -2.18
RAD3P06839 YHR214W-AYHR214W-A 486 nt1.43□□□□□ -2.18
RAD3P06839 MCM22YJR135C 720 nt1.43□□□□□ -2.18
RAD3P06839 YAR068WYAR068W 486 nt1.43□□□□□ -2.18
RAD3P06839 YOL159CYOL159C 516 nt1.43□□□□□ -2.18
RAD3P06839 IRE1YHR079C 3348 nt1.43□□□□□ -2.18
RAD3P06839 GNT1YOR320C 1476 nt1.43□□□□□ -2.18
RAD3P06839 OCA6YDR067C 675 nt1.42□□□□□ -2.18
RAD3P06839 YER175W-AYER175W-A 165 nt1.42□□□□□ -2.18
RAD3P06839 STF2YGR008C 255 nt1.42□□□□□ -2.18
RAD3P06839 TIM10YHR005C-A 282 nt1.42□□□□□ -2.18
RAD3P06839 YLR252WYLR252W 306 nt1.42□□□□□ -2.18
RAD3P06839 UBX4YMR067C 1251 nt1.42□□□□□ -2.18
RAD3P06839 MSH3YCR092C 3057 nt1.41□□□□□ -2.18
RAD3P06839 YDR029WYDR029W 315 nt1.41□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 105 ms