Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LINC00474Q9P2X8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 FEM1AP4-201ENST00000443167 1987 ntBASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 KRT18P61-201ENST00000585825 1298 ntBASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00474Q9P2X8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 AC007322.3-201ENST00000426526 701 ntBASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 AC007322.1-201ENST00000426983 750 ntBASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 AC069236.1-201ENST00000604339 616 ntBASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 AC011484.1-201ENST00000377652 1995 ntBASIC13.21□□□□□ -0.29
LINC00474Q9P2X8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
LINC00474Q9P2X8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00474Q9P2X8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00474Q9P2X8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00474Q9P2X8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00474Q9P2X8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00474Q9P2X8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00474Q9P2X8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 MFSD11-216ENST00000590393 1141 ntBASIC13.2□□□□□ -0.3
LINC00474Q9P2X8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms