Protein–RNA interactions for Protein: Q07442

BDF2, Bromodomain-containing factor 2, yeastyeast

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BDF2Q07442 snR76snR76 109 nt3.39□□□□□ -1.87
BDF2Q07442 CDC36YDL165W 576 nt3.39□□□□□ -1.87
BDF2Q07442 PAM16YJL104W 450 nt3.39□□□□□ -1.87
BDF2Q07442 SHE2YKL130C 741 nt3.39□□□□□ -1.87
BDF2Q07442 MGR1YCL044C 1254 nt3.39□□□□□ -1.87
BDF2Q07442 SNX41YDR425W 1878 nt3.39□□□□□ -1.87
BDF2Q07442 SPC72YAL047C 1869 nt3.39□□□□□ -1.87
BDF2Q07442 GIS4YML006C 2325 nt3.38□□□□□ -1.87
BDF2Q07442 GYP7YDL234C 2241 nt3.38□□□□□ -1.87
BDF2Q07442 YGL188C-AYGL188C-A 141 nt3.38□□□□□ -1.87
BDF2Q07442 PAC1YOR269W 1485 nt3.38□□□□□ -1.87
BDF2Q07442 RPN1YHR027C 2982 nt3.38□□□□□ -1.87
BDF2Q07442 PSO2YMR137C 1986 nt3.38□□□□□ -1.87
BDF2Q07442 YPK1YKL126W 2043 nt3.37□□□□□ -1.87
BDF2Q07442 CHS2YBR038W 2892 nt3.37□□□□□ -1.87
BDF2Q07442 TCP1YDR212W 1680 nt3.36□□□□□ -1.87
BDF2Q07442 VPS41YDR080W 2979 nt3.36□□□□□ -1.87
BDF2Q07442 YHR139C-AYHR139C-A 312 nt3.36□□□□□ -1.87
BDF2Q07442 tW(UCA)QtW(UCA)Q 74 nt3.36□□□□□ -1.87
BDF2Q07442 YOR146WYOR146W 306 nt3.36□□□□□ -1.87
BDF2Q07442 snR48snR48 113 nt3.36□□□□□ -1.87
BDF2Q07442 YJR003CYJR003C 1560 nt3.36□□□□□ -1.87
BDF2Q07442 TCB2YNL087W 3537 nt3.36□□□□□ -1.87
BDF2Q07442 TPS2YDR074W 2691 nt3.36□□□□□ -1.87
BDF2Q07442 RAX2YLR084C 3663 nt3.35□□□□□ -1.87
BDF2Q07442 DBP7YKR024C 2229 nt3.35□□□□□ -1.87
BDF2Q07442 SDH6YDR379C-A 240 nt3.35□□□□□ -1.87
BDF2Q07442 YHR078WYHR078W 1659 nt3.35□□□□□ -1.87
BDF2Q07442 NAB3YPL190C 2409 nt3.35□□□□□ -1.87
BDF2Q07442 SPO71YDR104C 3738 nt3.35□□□□□ -1.87
BDF2Q07442 DNL4YOR005C 2835 nt3.34□□□□□ -1.87
BDF2Q07442 YGL041CYGL041C 204 nt3.34□□□□□ -1.87
BDF2Q07442 FCF2YLR051C 654 nt3.34□□□□□ -1.87
BDF2Q07442 YLR458WYLR458W 381 nt3.34□□□□□ -1.87
BDF2Q07442 YBR197CYBR197C 654 nt3.34□□□□□ -1.87
BDF2Q07442 PDR3YBL005W 2931 nt3.34□□□□□ -1.87
BDF2Q07442 YSP2YDR326C 4317 nt3.34□□□□□ -1.88
BDF2Q07442 NUP82YJL061W 2142 nt3.34□□□□□ -1.88
BDF2Q07442 FUN30YAL019W 3396 nt3.34□□□□□ -1.88
BDF2Q07442 APQ12YIL040W 417 nt3.33□□□□□ -1.88
BDF2Q07442 RPA34YJL148W 702 nt3.33□□□□□ -1.88
BDF2Q07442 YJL202CYJL202C 348 nt3.33□□□□□ -1.88
BDF2Q07442 RAM2YKL019W 951 nt3.33□□□□□ -1.88
BDF2Q07442 RPL33AYPL143W 324 nt3.33□□□□□ -1.88
BDF2Q07442 TRM7YBR061C 933 nt3.33□□□□□ -1.88
BDF2Q07442 SKT5YBL061C 2091 nt3.32□□□□□ -1.88
BDF2Q07442 MSS11YMR164C 2277 nt3.32□□□□□ -1.88
BDF2Q07442 NCE101YJL205C 162 nt3.32□□□□□ -1.88
BDF2Q07442 RGM1YMR182C 636 nt3.32□□□□□ -1.88
BDF2Q07442 RPL20AYMR242C 519 nt3.32□□□□□ -1.88
BDF2Q07442 DUG2YBR281C 2637 nt3.32□□□□□ -1.88
BDF2Q07442 YDR186CYDR186C 2634 nt3.31□□□□□ -1.88
BDF2Q07442 MET6YER091C 2304 nt3.31□□□□□ -1.88
BDF2Q07442 IRC10YOL015W 1761 nt3.31□□□□□ -1.88
BDF2Q07442 YDR183C-AYDR183C-A 258 nt3.31□□□□□ -1.88
BDF2Q07442 YOR011W-AYOR011W-A 207 nt3.31□□□□□ -1.88
BDF2Q07442 BIL1YOR304C-A 231 nt3.31□□□□□ -1.88
BDF2Q07442 ATP15YPL271W 189 nt3.31□□□□□ -1.88
BDF2Q07442 NEW1YPL226W 3591 nt3.31□□□□□ -1.88
BDF2Q07442 PUF6YDR496C 1971 nt3.31□□□□□ -1.88
BDF2Q07442 YJL222W-BYJL222W-B 138 nt3.3□□□□□ -1.88
BDF2Q07442 YJL181WYJL181W 1836 nt3.3□□□□□ -1.88
BDF2Q07442 GCV2YMR189W 3105 nt3.3□□□□□ -1.88
BDF2Q07442 PMR1YGL167C 2853 nt3.3□□□□□ -1.88
BDF2Q07442 DOA4YDR069C 2781 nt3.29□□□□□ -1.88
BDF2Q07442 VPS52YDR484W 1926 nt3.29□□□□□ -1.88
BDF2Q07442 DRS2YAL026C 4068 nt3.29□□□□□ -1.88
BDF2Q07442 YFL063WYFL063W 456 nt3.29□□□□□ -1.88
BDF2Q07442 YBL065WYBL065W 345 nt3.29□□□□□ -1.88
BDF2Q07442 RPL25YOL127W 429 nt3.29□□□□□ -1.88
BDF2Q07442 COX1Q0045 1605 nt3.29□□□□□ -1.88
BDF2Q07442 RRM3YHR031C 2172 nt3.28□□□□□ -1.88
BDF2Q07442 URM1YIL008W 300 nt3.28□□□□□ -1.88
BDF2Q07442 AYR1YIL124W 894 nt3.28□□□□□ -1.88
BDF2Q07442 RPS22BYLR367W 393 nt3.28□□□□□ -1.88
BDF2Q07442 YPL150WYPL150W 2706 nt3.28□□□□□ -1.88
BDF2Q07442 KSP1YHR082C 3090 nt3.28□□□□□ -1.88
BDF2Q07442 ASG1YIL130W 2895 nt3.27□□□□□ -1.89
BDF2Q07442 YDL041WYDL041W 354 nt3.27□□□□□ -1.89
BDF2Q07442 YDR524C-AYDR524C-A 120 nt3.27□□□□□ -1.89
BDF2Q07442 snR51snR51 107 nt3.27□□□□□ -1.89
BDF2Q07442 NOT5YPR072W 1683 nt3.27□□□□□ -1.89
BDF2Q07442 SLN1YIL147C 3663 nt3.26□□□□□ -1.89
BDF2Q07442 RPL40AYIL148W 387 nt3.26□□□□□ -1.89
BDF2Q07442 YNL010WYNL010W 726 nt3.26□□□□□ -1.89
BDF2Q07442 IES4YOR189W 351 nt3.26□□□□□ -1.89
BDF2Q07442 EGD1YPL037C 474 nt3.26□□□□□ -1.89
BDF2Q07442 FIR1YER032W 2631 nt3.26□□□□□ -1.89
BDF2Q07442 TRS65YGR166W 1683 nt3.26□□□□□ -1.89
BDF2Q07442 YPR089WYPR089W 2667 nt3.26□□□□□ -1.89
BDF2Q07442 SSN2YDR443C 4263 nt3.25□□□□□ -1.89
BDF2Q07442 YIL066W-AYIL066W-A 444 nt3.25□□□□□ -1.89
BDF2Q07442 PHS1YJL097W 654 nt3.25□□□□□ -1.89
BDF2Q07442 ABF2YMR072W 552 nt3.25□□□□□ -1.89
BDF2Q07442 FPR1YNL135C 345 nt3.25□□□□□ -1.89
BDF2Q07442 CRS5YOR031W 210 nt3.25□□□□□ -1.89
BDF2Q07442 YPL238CYPL238C 390 nt3.25□□□□□ -1.89
BDF2Q07442 FKS3YMR306W 5358 nt3.24□□□□□ -1.89
BDF2Q07442 MZM1YDR493W 372 nt3.23□□□□□ -1.89
BDF2Q07442 RPS18BYML026C 441 nt3.23□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 34.3 ms