Protein–RNA interactions for Protein: Q06623

HDA3, HDA1 complex subunit 3, yeastyeast

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA3Q06623 TRX1YLR043C 312 nt3.72□□□□□ -1.81
HDA3Q06623 YLR255CYLR255C 354 nt3.72□□□□□ -1.81
HDA3Q06623 YOR381W-AYOR381W-A 168 nt3.72□□□□□ -1.81
HDA3Q06623 YBR182C-AYBR182C-A 195 nt3.72□□□□□ -1.81
HDA3Q06623 ABP140YOR239W 1887 nt3.72□□□□□ -1.81
HDA3Q06623 DUF1YOL087C 3351 nt3.71□□□□□ -1.81
HDA3Q06623 YNL097C-BYNL097C-B 123 nt3.71□□□□□ -1.82
HDA3Q06623 APE2YKL157W 2859 nt3.71□□□□□ -1.82
HDA3Q06623 SOK1YDR006C 2706 nt3.71□□□□□ -1.82
HDA3Q06623 CUL3YGR003W 2235 nt3.7□□□□□ -1.82
HDA3Q06623 SNU114YKL173W 3027 nt3.7□□□□□ -1.82
HDA3Q06623 YDR426CYDR426C 378 nt3.7□□□□□ -1.82
HDA3Q06623 YGL217CYGL217C 342 nt3.7□□□□□ -1.82
HDA3Q06623 TAF6YGL112C 1551 nt3.7□□□□□ -1.82
HDA3Q06623 PSO2YMR137C 1986 nt3.7□□□□□ -1.82
HDA3Q06623 XRN1YGL173C 4587 nt3.7□□□□□ -1.82
HDA3Q06623 SPB1YCL054W 2526 nt3.7□□□□□ -1.82
HDA3Q06623 DOT6YER088C 2013 nt3.7□□□□□ -1.82
HDA3Q06623 MSR1YHR091C 1932 nt3.7□□□□□ -1.82
HDA3Q06623 SUP56tL(CAA)A 82 nt3.69□□□□□ -1.82
HDA3Q06623 SUP53tL(CAA)C 82 nt3.69□□□□□ -1.82
HDA3Q06623 tL(CAA)DtL(CAA)D 82 nt3.69□□□□□ -1.82
HDA3Q06623 tL(CAA)G1tL(CAA)G1 82 nt3.69□□□□□ -1.82
HDA3Q06623 SUP54tL(CAA)G2 82 nt3.69□□□□□ -1.82
HDA3Q06623 tL(CAA)G3tL(CAA)G3 82 nt3.69□□□□□ -1.82
HDA3Q06623 tL(CAA)KtL(CAA)K 82 nt3.69□□□□□ -1.82
HDA3Q06623 tL(CAA)LtL(CAA)L 82 nt3.69□□□□□ -1.82
HDA3Q06623 tL(CAA)MtL(CAA)M 82 nt3.69□□□□□ -1.82
HDA3Q06623 tL(CAA)NtL(CAA)N 82 nt3.69□□□□□ -1.82
HDA3Q06623 YDR210W-BYDR210W-B 5313 nt3.69□□□□□ -1.82
HDA3Q06623 YDR261W-BYDR261W-B 5313 nt3.69□□□□□ -1.82
HDA3Q06623 YFL002W-AYFL002W-A 5313 nt3.69□□□□□ -1.82
HDA3Q06623 YGR161W-BYGR161W-B 5313 nt3.69□□□□□ -1.82
HDA3Q06623 YLR410W-BYLR410W-B 5313 nt3.69□□□□□ -1.82
HDA3Q06623 YCL019WYCL019W 5313 nt3.69□□□□□ -1.82
HDA3Q06623 SSM4YIL030C 3960 nt3.69□□□□□ -1.82
HDA3Q06623 NOP4YPL043W 2058 nt3.69□□□□□ -1.82
HDA3Q06623 TOF2YKR010C 2316 nt3.69□□□□□ -1.82
HDA3Q06623 NUP120YKL057C 3114 nt3.68□□□□□ -1.82
HDA3Q06623 SEC5YDR166C 2916 nt3.68□□□□□ -1.82
HDA3Q06623 STU1YBL034C 4542 nt3.68□□□□□ -1.82
HDA3Q06623 CDC27YBL084C 2277 nt3.68□□□□□ -1.82
HDA3Q06623 YGL069CYGL069C 465 nt3.68□□□□□ -1.82
HDA3Q06623 NTO1YPR031W 2247 nt3.68□□□□□ -1.82
HDA3Q06623 YGR027W-BYGR027W-B 5268 nt3.67□□□□□ -1.82
HDA3Q06623 YLR227W-BYLR227W-B 5268 nt3.67□□□□□ -1.82
HDA3Q06623 YPR158C-DYPR158C-D 5268 nt3.67□□□□□ -1.82
HDA3Q06623 ALK2YBL009W 2031 nt3.67□□□□□ -1.82
HDA3Q06623 FPR1YNL135C 345 nt3.67□□□□□ -1.82
HDA3Q06623 SPT6YGR116W 4356 nt3.67□□□□□ -1.82
HDA3Q06623 NUP159YIL115C 4383 nt3.67□□□□□ -1.82
HDA3Q06623 YDR286CYDR286C 345 nt3.66□□□□□ -1.82
HDA3Q06623 IES6YEL044W 501 nt3.66□□□□□ -1.82
HDA3Q06623 PRE4YFR050C 801 nt3.66□□□□□ -1.82
HDA3Q06623 ERP6YGL002W 651 nt3.66□□□□□ -1.82
HDA3Q06623 RPS27BYHR021C 249 nt3.66□□□□□ -1.82
HDA3Q06623 YPR092WYPR092W 306 nt3.66□□□□□ -1.82
HDA3Q06623 NUT2YPR168W 474 nt3.66□□□□□ -1.82
HDA3Q06623 ORC2YBR060C 1863 nt3.66□□□□□ -1.82
HDA3Q06623 RPN2YIL075C 2838 nt3.66□□□□□ -1.82
HDA3Q06623 YPR022CYPR022C 3402 nt3.66□□□□□ -1.82
HDA3Q06623 PSK2YOL045W 3306 nt3.65□□□□□ -1.82
HDA3Q06623 APC9YLR102C 798 nt3.65□□□□□ -1.83
HDA3Q06623 YBL053WYBL053W 375 nt3.65□□□□□ -1.83
HDA3Q06623 snR52snR52 92 nt3.65□□□□□ -1.83
HDA3Q06623 ASG1YIL130W 2895 nt3.65□□□□□ -1.83
HDA3Q06623 GUP1YGL084C 1683 nt3.65□□□□□ -1.83
HDA3Q06623 BOI1YBL085W 2943 nt3.64□□□□□ -1.83
HDA3Q06623 SSS1YDR086C 243 nt3.64□□□□□ -1.83
HDA3Q06623 SNC2YOR327C 348 nt3.64□□□□□ -1.83
HDA3Q06623 FAS1YKL182W 6156 nt3.64□□□□□ -1.83
HDA3Q06623 RDS1YCR106W 2499 nt3.64□□□□□ -1.83
HDA3Q06623 PHM6YDR281C 315 nt3.63□□□□□ -1.83
HDA3Q06623 MYO3YKL129C 3819 nt3.63□□□□□ -1.83
HDA3Q06623 YPR002C-AYPR002C-A 198 nt3.63□□□□□ -1.83
HDA3Q06623 SLA1YBL007C 3735 nt3.63□□□□□ -1.83
HDA3Q06623 SIZ1YDR409W 2715 nt3.63□□□□□ -1.83
HDA3Q06623 RLI1YDR091C 1827 nt3.63□□□□□ -1.83
HDA3Q06623 OSH3YHR073W 2991 nt3.62□□□□□ -1.83
HDA3Q06623 PAN3YKL025C 2040 nt3.62□□□□□ -1.83
HDA3Q06623 YOR161W-BYOR161W-B 261 nt3.62□□□□□ -1.83
HDA3Q06623 IPT1YDR072C 1584 nt3.62□□□□□ -1.83
HDA3Q06623 TMN3YER113C 2121 nt3.62□□□□□ -1.83
HDA3Q06623 TRM2YKR056W 1920 nt3.62□□□□□ -1.83
HDA3Q06623 YJL070CYJL070C 2667 nt3.61□□□□□ -1.83
HDA3Q06623 SGD1YLR336C 2700 nt3.61□□□□□ -1.83
HDA3Q06623 TIM11YDR322C-A 291 nt3.61□□□□□ -1.83
HDA3Q06623 SNU13YEL026W 381 nt3.61□□□□□ -1.83
HDA3Q06623 INA22YIR024C 651 nt3.61□□□□□ -1.83
HDA3Q06623 YIR030W-AYIR030W-A 384 nt3.61□□□□□ -1.83
HDA3Q06623 RPL25YOL127W 429 nt3.61□□□□□ -1.83
HDA3Q06623 YBL109WYBL109W 336 nt3.61□□□□□ -1.83
HDA3Q06623 YOR333CYOR333C 417 nt3.61□□□□□ -1.83
HDA3Q06623 RAD4YER162C 2265 nt3.61□□□□□ -1.83
HDA3Q06623 VPS54YDR027C 2670 nt3.61□□□□□ -1.83
HDA3Q06623 KRE5YOR336W 4098 nt3.61□□□□□ -1.83
HDA3Q06623 RAD26YJR035W 3258 nt3.61□□□□□ -1.83
HDA3Q06623 BAS1YKR099W 2436 nt3.6□□□□□ -1.83
HDA3Q06623 RTC6YPL183W-A 282 nt3.6□□□□□ -1.83
HDA3Q06623 BCH1YMR237W 2175 nt3.6□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 25.1 ms