Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YOL085W-AYOL085W-A 213 nt0.03□□□□□ -2.4
RKR1Q04781 MSS2YDL107W 1056 nt0.02□□□□□ -2.41
RKR1Q04781 VPS74YDR372C 1038 nt0.02□□□□□ -2.41
RKR1Q04781 MZM1YDR493W 372 nt0.02□□□□□ -2.41
RKR1Q04781 YOR053WYOR053W 342 nt0.02□□□□□ -2.41
RKR1Q04781 snR11snR11 258 nt0.02□□□□□ -2.41
RKR1Q04781 SLF1YDR515W 1344 nt0.02□□□□□ -2.41
RKR1Q04781 SWT1YOR166C 1377 nt0.02□□□□□ -2.41
RKR1Q04781 NUP188YML103C 4968 nt0.01□□□□□ -2.41
RKR1Q04781 COX3Q0275 810 nt0□□□□□ -2.41
RKR1Q04781 NUT1YGL151W 3399 nt-0.01□□□□□ -2.41
RKR1Q04781 YMR178WYMR178W 825 nt-0.01□□□□□ -2.41
RKR1Q04781 YER147C-AYER147C-A 411 nt-0.02□□□□□ -2.41
RKR1Q04781 ECM12YHR021W-A 456 nt-0.02□□□□□ -2.41
RKR1Q04781 SDL1YIL167W 633 nt-0.02□□□□□ -2.41
RKR1Q04781 LOA1YPR139C 903 nt-0.02□□□□□ -2.41
RKR1Q04781 MON1YGL124C 1935 nt-0.02□□□□□ -2.41
RKR1Q04781 AFR1YDR085C 1863 nt-0.02□□□□□ -2.41
RKR1Q04781 YHL009W-AYHL009W-A 1242 nt-0.03□□□□□ -2.41
RKR1Q04781 GIM3YNL153C 390 nt-0.03□□□□□ -2.41
RKR1Q04781 YBR076C-AYBR076C-A 267 nt-0.04□□□□□ -2.42
RKR1Q04781 KDX1YKL161C 1302 nt-0.05□□□□□ -2.42
RKR1Q04781 COS7YDL248W 1152 nt-0.06□□□□□ -2.42
RKR1Q04781 HLR1YDR528W 1272 nt-0.06□□□□□ -2.42
RKR1Q04781 YFR054CYFR054C 579 nt-0.06□□□□□ -2.42
RKR1Q04781 YIL141WYIL141W 390 nt-0.06□□□□□ -2.42
RKR1Q04781 COF1YLL050C 432 nt-0.06□□□□□ -2.42
RKR1Q04781 YLR290CYLR290C 834 nt-0.06□□□□□ -2.42
RKR1Q04781 YLR400WYLR400W 474 nt-0.06□□□□□ -2.42
RKR1Q04781 STB6YKL072W 2301 nt-0.06□□□□□ -2.42
RKR1Q04781 YEL075CYEL075C 369 nt-0.07□□□□□ -2.42
RKR1Q04781 YER189WYER189W 369 nt-0.07□□□□□ -2.42
RKR1Q04781 YOR161W-BYOR161W-B 261 nt-0.08□□□□□ -2.42
RKR1Q04781 MKT1YNL085W 2493 nt-0.08□□□□□ -2.42
RKR1Q04781 YEL009C-AYEL009C-A 408 nt-0.09□□□□□ -2.42
RKR1Q04781 EMC2YJR088C 879 nt-0.09□□□□□ -2.42
RKR1Q04781 IRC19YLL033W 693 nt-0.09□□□□□ -2.42
RKR1Q04781 REX3YLR107W 1215 nt-0.09□□□□□ -2.42
RKR1Q04781 YPL135C-AYPL135C-A 174 nt-0.09□□□□□ -2.42
RKR1Q04781 TSA2YDR453C 591 nt-0.1□□□□□ -2.42
RKR1Q04781 RPL37AYLR185W 267 nt-0.1□□□□□ -2.42
RKR1Q04781 WHI3YNL197C 1986 nt-0.1□□□□□ -2.43
RKR1Q04781 TFB5YDR079C-A 219 nt-0.11□□□□□ -2.43
RKR1Q04781 SLU7YDR088C 1149 nt-0.11□□□□□ -2.43
RKR1Q04781 YGR164WYGR164W 336 nt-0.11□□□□□ -2.43
RKR1Q04781 CKA1YIL035C 1119 nt-0.11□□□□□ -2.43
RKR1Q04781 YDL157CYDL157C 357 nt-0.13□□□□□ -2.43
RKR1Q04781 RRT7YLL030C 342 nt-0.14□□□□□ -2.43
RKR1Q04781 YLR124WYLR124W 345 nt-0.14□□□□□ -2.43
RKR1Q04781 YLL020CYLL020C 306 nt-0.15□□□□□ -2.43
RKR1Q04781 YLR232WYLR232W 348 nt-0.15□□□□□ -2.43
RKR1Q04781 CMC2YBL059C-A 330 nt-0.15□□□□□ -2.43
RKR1Q04781 YOL013W-AYOL013W-A 192 nt-0.15□□□□□ -2.43
RKR1Q04781 YDR042CYDR042C 603 nt-0.15□□□□□ -2.43
RKR1Q04781 VMA7YGR020C 357 nt-0.15□□□□□ -2.43
RKR1Q04781 SNC1YAL030W 354 nt-0.15□□□□□ -2.43
RKR1Q04781 YBL028CYBL028C 321 nt-0.15□□□□□ -2.43
RKR1Q04781 IPI3YNL182C 1668 nt-0.15□□□□□ -2.43
RKR1Q04781 SFM1YOR021C 642 nt-0.16□□□□□ -2.44
RKR1Q04781 IES4YOR189W 351 nt-0.16□□□□□ -2.44
RKR1Q04781 SPT21YMR179W 2277 nt-0.16□□□□□ -2.44
RKR1Q04781 HOP2YGL033W 657 nt-0.17□□□□□ -2.44
RKR1Q04781 RPC10YHR143W-A 213 nt-0.17□□□□□ -2.44
RKR1Q04781 DSE2YHR143W 978 nt-0.17□□□□□ -2.44
RKR1Q04781 VIK1YPL253C 1944 nt-0.17□□□□□ -2.44
RKR1Q04781 NUR1YDL089W 1455 nt-0.17□□□□□ -2.44
RKR1Q04781 PRM9YAR031W 897 nt-0.18□□□□□ -2.44
RKR1Q04781 FYV6YNL133C 522 nt-0.18□□□□□ -2.44
RKR1Q04781 snR190snR190 190 nt-0.18□□□□□ -2.44
RKR1Q04781 GLC7YER133W 939 nt-0.19□□□□□ -2.44
RKR1Q04781 SWS2YNL081C 432 nt-0.19□□□□□ -2.44
RKR1Q04781 SAG1YJR004C 1953 nt-0.19□□□□□ -2.44
RKR1Q04781 YCR108CYCR108C 192 nt-0.19□□□□□ -2.44
RKR1Q04781 NYV1YLR093C 762 nt-0.19□□□□□ -2.44
RKR1Q04781 YNL228WYNL228W 777 nt-0.19□□□□□ -2.44
RKR1Q04781 GDS1YOR355W 1569 nt-0.2□□□□□ -2.44
RKR1Q04781 MAM1YER106W 909 nt-0.2□□□□□ -2.44
RKR1Q04781 YMR31YFR049W 372 nt-0.2□□□□□ -2.44
RKR1Q04781 SMY1YKL079W 1971 nt-0.2□□□□□ -2.44
RKR1Q04781 POL4YCR014C 1749 nt-0.21□□□□□ -2.44
RKR1Q04781 YMR099CYMR099C 894 nt-0.21□□□□□ -2.44
RKR1Q04781 UAF30YOR295W 687 nt-0.21□□□□□ -2.44
RKR1Q04781 YPL034WYPL034W 498 nt-0.21□□□□□ -2.44
RKR1Q04781 TOF2YKR010C 2316 nt-0.21□□□□□ -2.44
RKR1Q04781 YGR219WYGR219W 342 nt-0.22□□□□□ -2.44
RKR1Q04781 RTR1YER139C 681 nt-0.23□□□□□ -2.45
RKR1Q04781 YIR036W-AYIR036W-A 402 nt-0.23□□□□□ -2.45
RKR1Q04781 UIP3YAR027W 708 nt-0.23□□□□□ -2.45
RKR1Q04781 CTL1YMR180C 963 nt-0.23□□□□□ -2.45
RKR1Q04781 YCL001W-AYCL001W-A 462 nt-0.23□□□□□ -2.45
RKR1Q04781 PRP5YBR237W 2550 nt-0.23□□□□□ -2.45
RKR1Q04781 KAR3YPR141C 2190 nt-0.23□□□□□ -2.45
RKR1Q04781 SNX4YJL036W 1272 nt-0.23□□□□□ -2.45
RKR1Q04781 COX12YLR038C 252 nt-0.23□□□□□ -2.45
RKR1Q04781 YLR225CYLR225C 1224 nt-0.23□□□□□ -2.45
RKR1Q04781 IRC14YOR135C 342 nt-0.23□□□□□ -2.45
RKR1Q04781 BIT61YJL058C 1632 nt-0.24□□□□□ -2.45
RKR1Q04781 RAD34YDR314C 2079 nt-0.24□□□□□ -2.45
RKR1Q04781 MXR1YER042W 555 nt-0.25□□□□□ -2.45
RKR1Q04781 YIR020CYIR020C 303 nt-0.25□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 35.3 ms