Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 GIC1YHR061C 945 nt1.1□□□□□ -2.23
SHH3Q04487 YBL107W-AYBL107W-A 105 nt1.1□□□□□ -2.23
SHH3Q04487 RTC6YPL183W-A 282 nt1.1□□□□□ -2.23
SHH3Q04487 YSY6YBR162W-A 198 nt1.1□□□□□ -2.23
SHH3Q04487 DAS1YJL149W 1992 nt1.1□□□□□ -2.23
SHH3Q04487 CDC25YLR310C 4770 nt1.09□□□□□ -2.23
SHH3Q04487 SLS1YLR139C 1932 nt1.09□□□□□ -2.23
SHH3Q04487 SPC98YNL126W 2541 nt1.09□□□□□ -2.23
SHH3Q04487 MZM1YDR493W 372 nt1.09□□□□□ -2.23
SHH3Q04487 RPL29YFR032C-A 180 nt1.09□□□□□ -2.23
SHH3Q04487 YGR283CYGR283C 1026 nt1.09□□□□□ -2.23
SHH3Q04487 IRC19YLL033W 693 nt1.09□□□□□ -2.23
SHH3Q04487 TIF11YMR260C 462 nt1.09□□□□□ -2.23
SHH3Q04487 YSW1YBR148W 1830 nt1.09□□□□□ -2.23
SHH3Q04487 RIC1YLR039C 3171 nt1.09□□□□□ -2.24
SHH3Q04487 NOP53YPL146C 1368 nt1.08□□□□□ -2.24
SHH3Q04487 ZRG8YER033C 3231 nt1.08□□□□□ -2.24
SHH3Q04487 DAD1YDR016C 285 nt1.08□□□□□ -2.24
SHH3Q04487 VMA7YGR020C 357 nt1.08□□□□□ -2.24
SHH3Q04487 YHC1YLR298C 696 nt1.08□□□□□ -2.24
SHH3Q04487 SNC2YOR327C 348 nt1.08□□□□□ -2.24
SHH3Q04487 CTF4YPR135W 2784 nt1.08□□□□□ -2.24
SHH3Q04487 RSM22YKL155C 1887 nt1.07□□□□□ -2.24
SHH3Q04487 BST1YFL025C 3090 nt1.07□□□□□ -2.24
SHH3Q04487 YDR194W-AYDR194W-A 153 nt1.07□□□□□ -2.24
SHH3Q04487 VOA1YGR106C 798 nt1.07□□□□□ -2.24
SHH3Q04487 COX3Q0275 810 nt1.07□□□□□ -2.24
SHH3Q04487 PGA1YNL158W 597 nt1.07□□□□□ -2.24
SHH3Q04487 PHO80YOL001W 882 nt1.07□□□□□ -2.24
SHH3Q04487 PET123YOR158W 957 nt1.07□□□□□ -2.24
SHH3Q04487 GAL7YBR018C 1101 nt1.07□□□□□ -2.24
SHH3Q04487 CDC31YOR257W 486 nt1.07□□□□□ -2.24
SHH3Q04487 MEI5YPL121C 669 nt1.07□□□□□ -2.24
SHH3Q04487 ROX1YPR065W 1107 nt1.07□□□□□ -2.24
SHH3Q04487 COX1Q0045 1605 nt1.07□□□□□ -2.24
SHH3Q04487 PHR1YOR386W 1698 nt1.07□□□□□ -2.24
SHH3Q04487 snR59snR59 78 nt1.06□□□□□ -2.24
SHH3Q04487 YDR115WYDR115W 318 nt1.06□□□□□ -2.24
SHH3Q04487 YER158W-AYER158W-A 216 nt1.06□□□□□ -2.24
SHH3Q04487 BET4YJL031C 984 nt1.06□□□□□ -2.24
SHH3Q04487 YLR255CYLR255C 354 nt1.06□□□□□ -2.24
SHH3Q04487 YNL010WYNL010W 726 nt1.06□□□□□ -2.24
SHH3Q04487 NOT5YPR072W 1683 nt1.06□□□□□ -2.24
SHH3Q04487 MSC6YOR354C 2079 nt1.06□□□□□ -2.24
SHH3Q04487 YGR250CYGR250C 2346 nt1.05□□□□□ -2.24
SHH3Q04487 MRPL32YCR003W 552 nt1.05□□□□□ -2.24
SHH3Q04487 IRC2YDR112W 309 nt1.05□□□□□ -2.24
SHH3Q04487 CWC23YGL128C 852 nt1.05□□□□□ -2.24
SHH3Q04487 GPN3YLR243W 819 nt1.05□□□□□ -2.24
SHH3Q04487 YBL068W-AYBL068W-A 237 nt1.05□□□□□ -2.24
SHH3Q04487 YOL106WYOL106W 354 nt1.05□□□□□ -2.24
SHH3Q04487 KAR1YNL188W 1302 nt1.05□□□□□ -2.24
SHH3Q04487 ALK1YGL021W 2283 nt1.05□□□□□ -2.24
SHH3Q04487 YER088C-AYER088C-A 324 nt1.04□□□□□ -2.24
SHH3Q04487 CIC1YHR052W 1131 nt1.04□□□□□ -2.24
SHH3Q04487 YIL082WYIL082W 873 nt1.04□□□□□ -2.24
SHH3Q04487 SMD3YLR147C 306 nt1.04□□□□□ -2.24
SHH3Q04487 YNL226WYNL226W 411 nt1.04□□□□□ -2.24
SHH3Q04487 YBL083CYBL083C 426 nt1.04□□□□□ -2.24
SHH3Q04487 CTR9YOL145C 3234 nt1.04□□□□□ -2.24
SHH3Q04487 SAG1YJR004C 1953 nt1.03□□□□□ -2.24
SHH3Q04487 YCR043CYCR043C 384 nt1.03□□□□□ -2.24
SHH3Q04487 YCR102W-AYCR102W-A 198 nt1.03□□□□□ -2.24
SHH3Q04487 YJL022WYJL022W 309 nt1.03□□□□□ -2.24
SHH3Q04487 RPS7BYNL096C 573 nt1.03□□□□□ -2.24
SHH3Q04487 BRX1YOL077C 876 nt1.03□□□□□ -2.24
SHH3Q04487 RPL33BYOR234C 324 nt1.03□□□□□ -2.24
SHH3Q04487 IRE1YHR079C 3348 nt1.03□□□□□ -2.24
SHH3Q04487 SHE4YOR035C 2370 nt1.03□□□□□ -2.25
SHH3Q04487 FRK1YPL141C 2598 nt1.02□□□□□ -2.25
SHH3Q04487 KAP122YGL016W 3246 nt1.02□□□□□ -2.25
SHH3Q04487 TDA2YER071C 381 nt1.02□□□□□ -2.25
SHH3Q04487 LAG1YHL003C 1236 nt1.02□□□□□ -2.25
SHH3Q04487 YIR021W-AYIR021W-A 213 nt1.02□□□□□ -2.25
SHH3Q04487 YJL015CYJL015C 285 nt1.02□□□□□ -2.25
SHH3Q04487 DPB11YJL090C 2295 nt1.02□□□□□ -2.25
SHH3Q04487 ACF4YJR083C 930 nt1.02□□□□□ -2.25
SHH3Q04487 YLR149CYLR149C 2193 nt1.02□□□□□ -2.25
SHH3Q04487 YLR217WYLR217W 324 nt1.02□□□□□ -2.25
SHH3Q04487 YLR307C-AYLR307C-A 264 nt1.02□□□□□ -2.25
SHH3Q04487 YMR324CYMR324C 243 nt1.02□□□□□ -2.25
SHH3Q04487 YOL159C-AYOL159C-A 273 nt1.02□□□□□ -2.25
SHH3Q04487 RLM1YPL089C 2031 nt1.02□□□□□ -2.25
SHH3Q04487 GPX2YBR244W 489 nt1.02□□□□□ -2.25
SHH3Q04487 MNL2YLR057W 2550 nt1.02□□□□□ -2.25
SHH3Q04487 NUP192YJL039C 5052 nt1.01□□□□□ -2.25
SHH3Q04487 APL1YJR005W 2103 nt1.01□□□□□ -2.25
SHH3Q04487 NCA2YPR155C 1851 nt1.01□□□□□ -2.25
SHH3Q04487 BNA7YDR428C 786 nt1.01□□□□□ -2.25
SHH3Q04487 tH(GUG)E1tH(GUG)E1 72 nt1.01□□□□□ -2.25
SHH3Q04487 tH(GUG)E2tH(GUG)E2 72 nt1.01□□□□□ -2.25
SHH3Q04487 tH(GUG)G1tH(GUG)G1 72 nt1.01□□□□□ -2.25
SHH3Q04487 tH(GUG)G2tH(GUG)G2 72 nt1.01□□□□□ -2.25
SHH3Q04487 tH(GUG)HtH(GUG)H 72 nt1.01□□□□□ -2.25
SHH3Q04487 tH(GUG)KtH(GUG)K 72 nt1.01□□□□□ -2.25
SHH3Q04487 CAJ1YER048C 1176 nt1.01□□□□□ -2.25
SHH3Q04487 tH(GUG)MtH(GUG)M 72 nt1.01□□□□□ -2.25
SHH3Q04487 MPC1YGL080W 393 nt1.01□□□□□ -2.25
SHH3Q04487 YIL030W-AYIL030W-A 339 nt1.01□□□□□ -2.25
SHH3Q04487 RPC25YKL144C 639 nt1.01□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 78.9 ms