Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 SEN15YMR059W 387 nt2.21□□□□□ -2.06
RPA49Q01080 DGR1YNL130C-A 147 nt2.21□□□□□ -2.06
RPA49Q01080 MF(ALPHA)1YPL187W 498 nt2.21□□□□□ -2.06
RPA49Q01080 SLM6YBR266C 453 nt2.21□□□□□ -2.06
RPA49Q01080 NAN1YPL126W 2691 nt2.21□□□□□ -2.06
RPA49Q01080 GIP3YPL137C 3831 nt2.2□□□□□ -2.06
RPA49Q01080 GYP5YPL249C 2685 nt2.2□□□□□ -2.06
RPA49Q01080 NIC96YFR002W 2520 nt2.2□□□□□ -2.06
RPA49Q01080 MSL1YIR009W 336 nt2.2□□□□□ -2.06
RPA49Q01080 SNC1YAL030W 354 nt2.2□□□□□ -2.06
RPA49Q01080 YLR154W-AYLR154W-A 186 nt2.2□□□□□ -2.06
RPA49Q01080 DDR48YMR173W 1293 nt2.2□□□□□ -2.06
RPA49Q01080 MRPL44YMR225C 297 nt2.2□□□□□ -2.06
RPA49Q01080 PEX17YNL214W 600 nt2.2□□□□□ -2.06
RPA49Q01080 PET123YOR158W 957 nt2.2□□□□□ -2.06
RPA49Q01080 RSA1YPL193W 1146 nt2.2□□□□□ -2.06
RPA49Q01080 DAD3YBR233W-A 285 nt2.2□□□□□ -2.06
RPA49Q01080 RPC10YHR143W-A 213 nt2.19□□□□□ -2.06
RPA49Q01080 tT(UGU)Q1tT(UGU)Q1 76 nt2.19□□□□□ -2.06
RPA49Q01080 RPI1YIL119C 1224 nt2.19□□□□□ -2.06
RPA49Q01080 YJR079WYJR079W 330 nt2.19□□□□□ -2.06
RPA49Q01080 SIP18YMR175W 240 nt2.19□□□□□ -2.06
RPA49Q01080 YBR076C-AYBR076C-A 267 nt2.19□□□□□ -2.06
RPA49Q01080 BFA1YJR053W 1725 nt2.19□□□□□ -2.06
RPA49Q01080 VPH1YOR270C 2523 nt2.18□□□□□ -2.06
RPA49Q01080 YER172C-AYER172C-A 381 nt2.18□□□□□ -2.06
RPA49Q01080 VOA1YGR106C 798 nt2.18□□□□□ -2.06
RPA49Q01080 YHR052W-AYHR052W-A 195 nt2.18□□□□□ -2.06
RPA49Q01080 YHR054W-AYHR054W-A 195 nt2.18□□□□□ -2.06
RPA49Q01080 NOP10YHR072W-A 177 nt2.18□□□□□ -2.06
RPA49Q01080 NCE101YJL205C 162 nt2.18□□□□□ -2.06
RPA49Q01080 FYV7YLR068W 456 nt2.18□□□□□ -2.06
RPA49Q01080 GRX8YLR364W 330 nt2.18□□□□□ -2.06
RPA49Q01080 ROX1YPR065W 1107 nt2.18□□□□□ -2.06
RPA49Q01080 IPT1YDR072C 1584 nt2.18□□□□□ -2.06
RPA49Q01080 CDC53YDL132W 2448 nt2.17□□□□□ -2.06
RPA49Q01080 IRC19YLL033W 693 nt2.17□□□□□ -2.06
RPA49Q01080 ATP19YOL077W-A 207 nt2.17□□□□□ -2.06
RPA49Q01080 RPB5YBR154C 648 nt2.17□□□□□ -2.06
RPA49Q01080 TOF1YNL273W 3717 nt2.17□□□□□ -2.06
RPA49Q01080 CRM1YGR218W 3255 nt2.16□□□□□ -2.06
RPA49Q01080 MGM1YOR211C 2646 nt2.16□□□□□ -2.06
RPA49Q01080 YER188C-AYER188C-A 300 nt2.16□□□□□ -2.06
RPA49Q01080 COX13YGL191W 390 nt2.16□□□□□ -2.06
RPA49Q01080 YCL023CYCL023C 348 nt2.16□□□□□ -2.06
RPA49Q01080 YOR192C-AYOR192C-A 1317 nt2.16□□□□□ -2.06
RPA49Q01080 UBP1YDL122W 2430 nt2.15□□□□□ -2.07
RPA49Q01080 YEL057CYEL057C 702 nt2.15□□□□□ -2.07
RPA49Q01080 YKL165C-AYKL165C-A 234 nt2.15□□□□□ -2.07
RPA49Q01080 SPC72YAL047C 1869 nt2.15□□□□□ -2.07
RPA49Q01080 IRC10YOL015W 1761 nt2.15□□□□□ -2.07
RPA49Q01080 PPN1YDR452W 2025 nt2.15□□□□□ -2.07
RPA49Q01080 MUD2YKL074C 1584 nt2.15□□□□□ -2.07
RPA49Q01080 FKS1YLR342W 5631 nt2.14□□□□□ -2.07
RPA49Q01080 STH1YIL126W 4080 nt2.14□□□□□ -2.07
RPA49Q01080 MSS11YMR164C 2277 nt2.14□□□□□ -2.07
RPA49Q01080 SPP41YDR464W 4308 nt2.14□□□□□ -2.07
RPA49Q01080 DAD4YDR320C-A 219 nt2.14□□□□□ -2.07
RPA49Q01080 SMD1YGR074W 441 nt2.14□□□□□ -2.07
RPA49Q01080 YHR180W-AYHR180W-A 183 nt2.14□□□□□ -2.07
RPA49Q01080 YLR171WYLR171W 390 nt2.14□□□□□ -2.07
RPA49Q01080 YML108WYML108W 318 nt2.14□□□□□ -2.07
RPA49Q01080 VMA9YCL005W-A 222 nt2.14□□□□□ -2.07
RPA49Q01080 TRL1YJL087C 2484 nt2.14□□□□□ -2.07
RPA49Q01080 VPS52YDR484W 1926 nt2.13□□□□□ -2.07
RPA49Q01080 RNH70YGR276C 1662 nt2.13□□□□□ -2.07
RPA49Q01080 MET18YIL128W 3099 nt2.13□□□□□ -2.07
RPA49Q01080 YPR097WYPR097W 3222 nt2.13□□□□□ -2.07
RPA49Q01080 YKR051WYKR051W 1257 nt2.13□□□□□ -2.07
RPA49Q01080 SNC2YOR327C 348 nt2.13□□□□□ -2.07
RPA49Q01080 YOR333CYOR333C 417 nt2.13□□□□□ -2.07
RPA49Q01080 TSC3YBR058C-A 243 nt2.13□□□□□ -2.07
RPA49Q01080 CDC60YPL160W 3273 nt2.13□□□□□ -2.07
RPA49Q01080 RIC1YLR039C 3171 nt2.13□□□□□ -2.07
RPA49Q01080 RTT101YJL047C 2529 nt2.13□□□□□ -2.07
RPA49Q01080 YDL041WYDL041W 354 nt2.12□□□□□ -2.07
RPA49Q01080 BI2Q0110 1272 nt2.12□□□□□ -2.07
RPA49Q01080 YHR214W-AYHR214W-A 486 nt2.12□□□□□ -2.07
RPA49Q01080 YAR068WYAR068W 486 nt2.12□□□□□ -2.07
RPA49Q01080 COX7YMR256C 183 nt2.12□□□□□ -2.07
RPA49Q01080 YOR248WYOR248W 303 nt2.12□□□□□ -2.07
RPA49Q01080 MNE1YOR350C 1992 nt2.12□□□□□ -2.07
RPA49Q01080 TOR2YKL203C 7425 nt2.11□□□□□ -2.07
RPA49Q01080 FAB1YFR019W 6837 nt2.11□□□□□ -2.07
RPA49Q01080 SCH9YHR205W 2475 nt2.11□□□□□ -2.07
RPA49Q01080 SEC31YDL195W 3822 nt2.11□□□□□ -2.07
RPA49Q01080 YER084W-AYER084W-A 513 nt2.11□□□□□ -2.07
RPA49Q01080 ECL1YGR146C 636 nt2.11□□□□□ -2.07
RPA49Q01080 SEC22YLR268W 645 nt2.11□□□□□ -2.07
RPA49Q01080 YMR324CYMR324C 243 nt2.11□□□□□ -2.07
RPA49Q01080 RTC6YPL183W-A 282 nt2.11□□□□□ -2.07
RPA49Q01080 IST2YBR086C 2841 nt2.11□□□□□ -2.07
RPA49Q01080 SHE9YDR393W 1371 nt2.1□□□□□ -2.07
RPA49Q01080 ASM4YDL088C 1587 nt2.1□□□□□ -2.07
RPA49Q01080 USO1YDL058W 5373 nt2.1□□□□□ -2.07
RPA49Q01080 HMLALPHA2YCL067C 633 nt2.1□□□□□ -2.07
RPA49Q01080 MATALPHA2YCR039C 633 nt2.1□□□□□ -2.07
RPA49Q01080 RPF1YHR088W 888 nt2.1□□□□□ -2.07
RPA49Q01080 YPR039WYPR039W 336 nt2.1□□□□□ -2.07
RPA49Q01080 KAR3YPR141C 2190 nt2.1□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 75.4 ms