Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 YLR458WYLR458W 381 nt2.96□□□□□ -1.94
SSL2Q00578 YOR050CYOR050C 348 nt2.96□□□□□ -1.94
SSL2Q00578 YOR073W-AYOR073W-A 234 nt2.96□□□□□ -1.94
SSL2Q00578 RKM1YPL208W 1752 nt2.96□□□□□ -1.94
SSL2Q00578 ECM29YHL030W 5607 nt2.96□□□□□ -1.94
SSL2Q00578 YGL188C-AYGL188C-A 141 nt2.95□□□□□ -1.94
SSL2Q00578 HYR1YIR037W 492 nt2.95□□□□□ -1.94
SSL2Q00578 TMA22YJR014W 597 nt2.95□□□□□ -1.94
SSL2Q00578 snR191snR191 274 nt2.95□□□□□ -1.94
SSL2Q00578 IKI3YLR384C 4050 nt2.94□□□□□ -1.94
SSL2Q00578 YNL034WYNL034W 1839 nt2.94□□□□□ -1.94
SSL2Q00578 YDR250CYDR250C 276 nt2.94□□□□□ -1.94
SSL2Q00578 YHL006W-AYHL006W-A 354 nt2.94□□□□□ -1.94
SSL2Q00578 RPL20AYMR242C 519 nt2.94□□□□□ -1.94
SSL2Q00578 LCL1YPL056C 306 nt2.94□□□□□ -1.94
SSL2Q00578 SPB1YCL054W 2526 nt2.94□□□□□ -1.94
SSL2Q00578 BUD4YJR092W 4344 nt2.94□□□□□ -1.94
SSL2Q00578 SNQ2YDR011W 4506 nt2.94□□□□□ -1.94
SSL2Q00578 VPS52YDR484W 1926 nt2.93□□□□□ -1.94
SSL2Q00578 ESL2YKR096W 3588 nt2.93□□□□□ -1.94
SSL2Q00578 SSY1YDR160W 2559 nt2.93□□□□□ -1.94
SSL2Q00578 YDL011CYDL011C 324 nt2.93□□□□□ -1.94
SSL2Q00578 DAD4YDR320C-A 219 nt2.93□□□□□ -1.94
SSL2Q00578 Q0092Q0092 141 nt2.93□□□□□ -1.94
SSL2Q00578 YMR046W-AYMR046W-A 129 nt2.93□□□□□ -1.94
SSL2Q00578 SRB8YCR081W 4284 nt2.93□□□□□ -1.94
SSL2Q00578 YDL041WYDL041W 354 nt2.92□□□□□ -1.94
SSL2Q00578 RPL35AYDL191W 363 nt2.92□□□□□ -1.94
SSL2Q00578 POL3YDL102W 3294 nt2.92□□□□□ -1.94
SSL2Q00578 RTT10YPL183C 3042 nt2.92□□□□□ -1.94
SSL2Q00578 NUP82YJL061W 2142 nt2.92□□□□□ -1.94
SSL2Q00578 BNR1YIL159W 4128 nt2.91□□□□□ -1.94
SSL2Q00578 PSK2YOL045W 3306 nt2.91□□□□□ -1.94
SSL2Q00578 YIL058WYIL058W 285 nt2.91□□□□□ -1.94
SSL2Q00578 TAR1YLR154W-C 375 nt2.91□□□□□ -1.94
SSL2Q00578 HCH1YNL281W 462 nt2.91□□□□□ -1.94
SSL2Q00578 OSW7YFR039C 1533 nt2.91□□□□□ -1.94
SSL2Q00578 DUG2YBR281C 2637 nt2.91□□□□□ -1.94
SSL2Q00578 PRK1YIL095W 2433 nt2.91□□□□□ -1.94
SSL2Q00578 FUS1YCL027W 1539 nt2.9□□□□□ -1.95
SSL2Q00578 GCV2YMR189W 3105 nt2.9□□□□□ -1.95
SSL2Q00578 YJL016WYJL016W 1686 nt2.9□□□□□ -1.95
SSL2Q00578 CDC36YDL165W 576 nt2.9□□□□□ -1.95
SSL2Q00578 CSN9YDR179C 489 nt2.9□□□□□ -1.95
SSL2Q00578 YGL149WYGL149W 306 nt2.9□□□□□ -1.95
SSL2Q00578 YGR069WYGR069W 336 nt2.9□□□□□ -1.95
SSL2Q00578 APC9YLR102C 798 nt2.9□□□□□ -1.95
SSL2Q00578 YPK1YKL126W 2043 nt2.9□□□□□ -1.95
SSL2Q00578 SIP3YNL257C 3690 nt2.89□□□□□ -1.95
SSL2Q00578 NAN1YPL126W 2691 nt2.89□□□□□ -1.95
SSL2Q00578 ADK1YDR226W 669 nt2.89□□□□□ -1.95
SSL2Q00578 YDR406W-AYDR406W-A 246 nt2.89□□□□□ -1.95
SSL2Q00578 YCK3YER123W 1575 nt2.89□□□□□ -1.95
SSL2Q00578 CDC24YAL041W 2565 nt2.89□□□□□ -1.95
SSL2Q00578 BPT1YLL015W 4680 nt2.89□□□□□ -1.95
SSL2Q00578 YJL181WYJL181W 1836 nt2.89□□□□□ -1.95
SSL2Q00578 JSN1YJR091C 3276 nt2.88□□□□□ -1.95
SSL2Q00578 YIL082W-AYIL082W-A 4497 nt2.88□□□□□ -1.95
SSL2Q00578 CAF120YNL278W 3183 nt2.88□□□□□ -1.95
SSL2Q00578 SGO1YOR073W 1773 nt2.88□□□□□ -1.95
SSL2Q00578 ALG13YGL047W 609 nt2.88□□□□□ -1.95
SSL2Q00578 YOR055WYOR055W 435 nt2.88□□□□□ -1.95
SSL2Q00578 YOR072W-AYOR072W-A 249 nt2.88□□□□□ -1.95
SSL2Q00578 YPR203WYPR203W 309 nt2.88□□□□□ -1.95
SSL2Q00578 APC2YLR127C 2562 nt2.88□□□□□ -1.95
SSL2Q00578 RPA190YOR341W 4995 nt2.88□□□□□ -1.95
SSL2Q00578 TIM11YDR322C-A 291 nt2.87□□□□□ -1.95
SSL2Q00578 RPS24AYER074W 408 nt2.87□□□□□ -1.95
SSL2Q00578 ESF2YNR054C 951 nt2.87□□□□□ -1.95
SSL2Q00578 ECM5YMR176W 4236 nt2.87□□□□□ -1.95
SSL2Q00578 PRP8YHR165C 7242 nt2.87□□□□□ -1.95
SSL2Q00578 ARP8YOR141C 2646 nt2.87□□□□□ -1.95
SSL2Q00578 BAS1YKR099W 2436 nt2.87□□□□□ -1.95
SSL2Q00578 PAC1YOR269W 1485 nt2.86□□□□□ -1.95
SSL2Q00578 YDR344CYDR344C 444 nt2.86□□□□□ -1.95
SSL2Q00578 MZM1YDR493W 372 nt2.86□□□□□ -1.95
SSL2Q00578 YGL041CYGL041C 204 nt2.86□□□□□ -1.95
SSL2Q00578 SSN2YDR443C 4263 nt2.86□□□□□ -1.95
SSL2Q00578 NPR1YNL183C 2373 nt2.85□□□□□ -1.95
SSL2Q00578 HTL1YCR020W-B 237 nt2.85□□□□□ -1.95
SSL2Q00578 YDL062WYDL062W 426 nt2.85□□□□□ -1.95
SSL2Q00578 YDR209CYDR209C 414 nt2.85□□□□□ -1.95
SSL2Q00578 YEL020C-BYEL020C-B 198 nt2.85□□□□□ -1.95
SSL2Q00578 GPI14YJR013W 1212 nt2.85□□□□□ -1.95
SSL2Q00578 RPS18BYML026C 441 nt2.85□□□□□ -1.95
SSL2Q00578 COG3YER157W 2406 nt2.85□□□□□ -1.95
SSL2Q00578 BRO1YPL084W 2535 nt2.85□□□□□ -1.95
SSL2Q00578 PDR1YGL013C 3207 nt2.85□□□□□ -1.95
SSL2Q00578 MRD1YPR112C 2664 nt2.85□□□□□ -1.95
SSL2Q00578 RLF2YPR018W 1821 nt2.84□□□□□ -1.95
SSL2Q00578 snR79snR79 84 nt2.84□□□□□ -1.95
SSL2Q00578 YER189WYER189W 369 nt2.84□□□□□ -1.95
SSL2Q00578 YIL066W-AYIL066W-A 444 nt2.84□□□□□ -1.95
SSL2Q00578 YJL020W-AYJL020W-A 258 nt2.84□□□□□ -1.95
SSL2Q00578 MGR1YCL044C 1254 nt2.84□□□□□ -1.95
SSL2Q00578 YLL032CYLL032C 2478 nt2.84□□□□□ -1.96
SSL2Q00578 DYN1YKR054C 12279 nt2.84□□□□□ -1.96
SSL2Q00578 VPS41YDR080W 2979 nt2.84□□□□□ -1.96
SSL2Q00578 TOM1YDR457W 9807 nt2.84□□□□□ -1.96
SSL2Q00578 MCD1YDL003W 1701 nt2.83□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 25.3 ms