Protein–RNA interactions for Protein: P36026

UBP11, Ubiquitin carboxyl-terminal hydrolase 11, yeastyeast

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP11P36026 YKL111CYKL111C 336 nt2.42□□□□□ -2.02
UBP11P36026 TEN1YLR010C 483 nt2.42□□□□□ -2.02
UBP11P36026 YLR101CYLR101C 396 nt2.42□□□□□ -2.02
UBP11P36026 YMR320WYMR320W 306 nt2.42□□□□□ -2.02
UBP11P36026 YBR277CYBR277C 402 nt2.42□□□□□ -2.02
UBP11P36026 YPK1YKL126W 2043 nt2.42□□□□□ -2.02
UBP11P36026 ALK2YBL009W 2031 nt2.42□□□□□ -2.02
UBP11P36026 YEL043WYEL043W 2871 nt2.42□□□□□ -2.02
UBP11P36026 UTP22YGR090W 3714 nt2.42□□□□□ -2.02
UBP11P36026 SNU114YKL173W 3027 nt2.42□□□□□ -2.02
UBP11P36026 YDL068WYDL068W 330 nt2.41□□□□□ -2.02
UBP11P36026 YDR194W-AYDR194W-A 153 nt2.41□□□□□ -2.02
UBP11P36026 NBL1YHR199C-A 222 nt2.41□□□□□ -2.02
UBP11P36026 YHR214W-AYHR214W-A 486 nt2.41□□□□□ -2.02
UBP11P36026 tT(UGU)Q1tT(UGU)Q1 76 nt2.41□□□□□ -2.02
UBP11P36026 YAR068WYAR068W 486 nt2.41□□□□□ -2.02
UBP11P36026 RPS22BYLR367W 393 nt2.41□□□□□ -2.02
UBP11P36026 YLR406C-AYLR406C-A 150 nt2.41□□□□□ -2.02
UBP11P36026 SPF1YEL031W 3648 nt2.4□□□□□ -2.02
UBP11P36026 YFR056CYFR056C 369 nt2.4□□□□□ -2.03
UBP11P36026 AGA2YGL032C 264 nt2.4□□□□□ -2.03
UBP11P36026 RPC10YHR143W-A 213 nt2.4□□□□□ -2.03
UBP11P36026 YAL059C-AYAL059C-A 423 nt2.4□□□□□ -2.03
UBP11P36026 YMR153C-AYMR153C-A 336 nt2.4□□□□□ -2.03
UBP11P36026 TRA1YHR099W 11235 nt2.4□□□□□ -2.03
UBP11P36026 UBP1YDL122W 2430 nt2.39□□□□□ -2.03
UBP11P36026 YER188C-AYER188C-A 300 nt2.39□□□□□ -2.03
UBP11P36026 PET191YJR034W 327 nt2.39□□□□□ -2.03
UBP11P36026 SAS2YMR127C 1017 nt2.39□□□□□ -2.03
UBP11P36026 UBP11YKR098C 2154 nt2.39□□□□□ -2.03
UBP11P36026 YJL181WYJL181W 1836 nt2.38□□□□□ -2.03
UBP11P36026 NUP82YJL061W 2142 nt2.38□□□□□ -2.03
UBP11P36026 YDR114CYDR114C 303 nt2.38□□□□□ -2.03
UBP11P36026 ATP17YDR377W 306 nt2.38□□□□□ -2.03
UBP11P36026 NCE101YJL205C 162 nt2.38□□□□□ -2.03
UBP11P36026 SHE2YKL130C 741 nt2.38□□□□□ -2.03
UBP11P36026 YLR269CYLR269C 351 nt2.38□□□□□ -2.03
UBP11P36026 FYV12YOR183W 390 nt2.38□□□□□ -2.03
UBP11P36026 ATP15YPL271W 189 nt2.38□□□□□ -2.03
UBP11P36026 REV1YOR346W 2958 nt2.37□□□□□ -2.03
UBP11P36026 NAN1YPL126W 2691 nt2.37□□□□□ -2.03
UBP11P36026 NUP100YKL068W 2880 nt2.37□□□□□ -2.03
UBP11P36026 YLR154W-FYLR154W-F 141 nt2.37□□□□□ -2.03
UBP11P36026 snR13snR13 124 nt2.37□□□□□ -2.03
UBP11P36026 TSC3YBR058C-A 243 nt2.37□□□□□ -2.03
UBP11P36026 GIS1YDR096W 2685 nt2.37□□□□□ -2.03
UBP11P36026 YJL016WYJL016W 1686 nt2.37□□□□□ -2.03
UBP11P36026 RRP12YPL012W 3687 nt2.37□□□□□ -2.03
UBP11P36026 PTC5YOR090C 1719 nt2.37□□□□□ -2.03
UBP11P36026 HUR1YGL168W 333 nt2.36□□□□□ -2.03
UBP11P36026 EMP24YGL200C 612 nt2.36□□□□□ -2.03
UBP11P36026 IRC19YLL033W 693 nt2.36□□□□□ -2.03
UBP11P36026 PAU8YAL068C 363 nt2.36□□□□□ -2.03
UBP11P36026 YMR001C-AYMR001C-A 231 nt2.36□□□□□ -2.03
UBP11P36026 CMC2YBL059C-A 330 nt2.36□□□□□ -2.03
UBP11P36026 LSM7YNL147W 348 nt2.36□□□□□ -2.03
UBP11P36026 PAU20YOL161C 363 nt2.36□□□□□ -2.03
UBP11P36026 YPR039WYPR039W 336 nt2.36□□□□□ -2.03
UBP11P36026 ROX1YPR065W 1107 nt2.36□□□□□ -2.03
UBP11P36026 CSF1YLR087C 8877 nt2.35□□□□□ -2.03
UBP11P36026 FMP16YDR070C 282 nt2.35□□□□□ -2.03
UBP11P36026 DAD4YDR320C-A 219 nt2.35□□□□□ -2.03
UBP11P36026 TIM9YEL020W-A 264 nt2.35□□□□□ -2.03
UBP11P36026 IES5YER092W 378 nt2.35□□□□□ -2.03
UBP11P36026 YGL014C-AYGL014C-A 162 nt2.35□□□□□ -2.03
UBP11P36026 DAD3YBR233W-A 285 nt2.35□□□□□ -2.03
UBP11P36026 UFD4YKL010C 4452 nt2.34□□□□□ -2.03
UBP11P36026 MSL5YLR116W 1431 nt2.34□□□□□ -2.03
UBP11P36026 NCL1YBL024W 2055 nt2.34□□□□□ -2.03
UBP11P36026 YDL025W-AYDL025W-A 105 nt2.34□□□□□ -2.03
UBP11P36026 BTT1YDR252W 450 nt2.34□□□□□ -2.03
UBP11P36026 DNF1YER166W 4716 nt2.34□□□□□ -2.03
UBP11P36026 YPR097WYPR097W 3222 nt2.34□□□□□ -2.04
UBP11P36026 YFR016CYFR016C 3702 nt2.33□□□□□ -2.04
UBP11P36026 IPT1YDR072C 1584 nt2.33□□□□□ -2.04
UBP11P36026 MPH1YIR002C 2982 nt2.33□□□□□ -2.04
UBP11P36026 YER135CYER135C 393 nt2.33□□□□□ -2.04
UBP11P36026 YGR025WYGR025W 303 nt2.33□□□□□ -2.04
UBP11P36026 YJL052C-AYJL052C-A 120 nt2.33□□□□□ -2.04
UBP11P36026 YBR032WYBR032W 303 nt2.33□□□□□ -2.04
UBP11P36026 UBR1YGR184C 5853 nt2.33□□□□□ -2.04
UBP11P36026 IRA2YOL081W 9240 nt2.32□□□□□ -2.04
UBP11P36026 AFI1YOR129C 2682 nt2.32□□□□□ -2.04
UBP11P36026 VOA1YGR106C 798 nt2.32□□□□□ -2.04
UBP11P36026 YLR154W-AYLR154W-A 186 nt2.32□□□□□ -2.04
UBP11P36026 RPS17AYML024W 411 nt2.32□□□□□ -2.04
UBP11P36026 TIF11YMR260C 462 nt2.32□□□□□ -2.04
UBP11P36026 YNL010WYNL010W 726 nt2.32□□□□□ -2.04
UBP11P36026 MF(ALPHA)1YPL187W 498 nt2.32□□□□□ -2.04
UBP11P36026 MSS18YPR134W 807 nt2.32□□□□□ -2.04
UBP11P36026 SNX41YDR425W 1878 nt2.32□□□□□ -2.04
UBP11P36026 VPS52YDR484W 1926 nt2.32□□□□□ -2.04
UBP11P36026 TOF1YNL273W 3717 nt2.31□□□□□ -2.04
UBP11P36026 YJL070CYJL070C 2667 nt2.31□□□□□ -2.04
UBP11P36026 YDL041WYDL041W 354 nt2.31□□□□□ -2.04
UBP11P36026 MZM1YDR493W 372 nt2.31□□□□□ -2.04
UBP11P36026 PEX4YGR133W 552 nt2.31□□□□□ -2.04
UBP11P36026 YKL165C-AYKL165C-A 234 nt2.31□□□□□ -2.04
UBP11P36026 UTP30YKR060W 825 nt2.31□□□□□ -2.04
UBP11P36026 YLR031WYLR031W 561 nt2.31□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 70 ms