Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 tC(GCA)P1tC(GCA)P1 72 nt3.46□□□□□ -1.86
VPS35P34110 tC(GCA)P2tC(GCA)P2 72 nt3.46□□□□□ -1.86
VPS35P34110 YIL082W-AYIL082W-A 4497 nt3.46□□□□□ -1.86
VPS35P34110 YTA7YGR270W 4140 nt3.45□□□□□ -1.86
VPS35P34110 AI2Q0055 2565 nt3.45□□□□□ -1.86
VPS35P34110 DLS1YJL065C 504 nt3.45□□□□□ -1.86
VPS35P34110 HTB2YBL002W 396 nt3.45□□□□□ -1.86
VPS35P34110 CHO2YGR157W 2610 nt3.44□□□□□ -1.86
VPS35P34110 CDC36YDL165W 576 nt3.44□□□□□ -1.86
VPS35P34110 YDR048CYDR048C 315 nt3.44□□□□□ -1.86
VPS35P34110 YDR406W-AYDR406W-A 246 nt3.44□□□□□ -1.86
VPS35P34110 YNL010WYNL010W 726 nt3.44□□□□□ -1.86
VPS35P34110 RPL36BYPL249C-A 303 nt3.44□□□□□ -1.86
VPS35P34110 RCY1YJL204C 2523 nt3.44□□□□□ -1.86
VPS35P34110 SIN3YOL004W 4611 nt3.43□□□□□ -1.86
VPS35P34110 GIN4YDR507C 3429 nt3.43□□□□□ -1.86
VPS35P34110 GCD6YDR211W 2139 nt3.43□□□□□ -1.86
VPS35P34110 QCR7YDR529C 384 nt3.43□□□□□ -1.86
VPS35P34110 RPS28BYLR264W 204 nt3.43□□□□□ -1.86
VPS35P34110 MF(ALPHA)1YPL187W 498 nt3.43□□□□□ -1.86
VPS35P34110 YBR197CYBR197C 654 nt3.43□□□□□ -1.86
VPS35P34110 BAS1YKR099W 2436 nt3.43□□□□□ -1.86
VPS35P34110 KAR3YPR141C 2190 nt3.42□□□□□ -1.86
VPS35P34110 YSP2YDR326C 4317 nt3.42□□□□□ -1.86
VPS35P34110 tF(GAA)DtF(GAA)D 73 nt3.42□□□□□ -1.86
VPS35P34110 tF(GAA)NtF(GAA)N 73 nt3.42□□□□□ -1.86
VPS35P34110 DIS3YOL021C 3006 nt3.42□□□□□ -1.86
VPS35P34110 ALG13YGL047W 609 nt3.41□□□□□ -1.86
VPS35P34110 APC9YLR102C 798 nt3.41□□□□□ -1.86
VPS35P34110 YLR294CYLR294C 330 nt3.41□□□□□ -1.86
VPS35P34110 SPO14YKR031C 5052 nt3.41□□□□□ -1.86
VPS35P34110 TAO3YIL129C 7131 nt3.41□□□□□ -1.86
VPS35P34110 IPT1YDR072C 1584 nt3.41□□□□□ -1.86
VPS35P34110 DBP6YNR038W 1890 nt3.41□□□□□ -1.86
VPS35P34110 CDC20YGL116W 1833 nt3.4□□□□□ -1.86
VPS35P34110 PSY2YNL201C 2577 nt3.4□□□□□ -1.86
VPS35P34110 YDL062WYDL062W 426 nt3.4□□□□□ -1.87
VPS35P34110 YGL024WYGL024W 336 nt3.4□□□□□ -1.87
VPS35P34110 snR49snR49 165 nt3.4□□□□□ -1.87
VPS35P34110 BUD4YJR092W 4344 nt3.4□□□□□ -1.87
VPS35P34110 YJL070CYJL070C 2667 nt3.4□□□□□ -1.87
VPS35P34110 snR76snR76 109 nt3.39□□□□□ -1.87
VPS35P34110 RPS27AYKL156W 249 nt3.39□□□□□ -1.87
VPS35P34110 SMA2YML066C 1110 nt3.39□□□□□ -1.87
VPS35P34110 RGM1YMR182C 636 nt3.39□□□□□ -1.87
VPS35P34110 DAD3YBR233W-A 285 nt3.39□□□□□ -1.87
VPS35P34110 SPO71YDR104C 3738 nt3.39□□□□□ -1.87
VPS35P34110 CIN8YEL061C 3003 nt3.38□□□□□ -1.87
VPS35P34110 ARP7YPR034W 1434 nt3.38□□□□□ -1.87
VPS35P34110 YIL102CYIL102C 306 nt3.38□□□□□ -1.87
VPS35P34110 GIS4YML006C 2325 nt3.38□□□□□ -1.87
VPS35P34110 TFC1YBR123C 1950 nt3.38□□□□□ -1.87
VPS35P34110 RLI1YDR091C 1827 nt3.37□□□□□ -1.87
VPS35P34110 FLO1YAR050W 4614 nt3.37□□□□□ -1.87
VPS35P34110 DSE4YNR067C 3354 nt3.37□□□□□ -1.87
VPS35P34110 RAD61YDR014W 1944 nt3.37□□□□□ -1.87
VPS35P34110 NUP120YKL057C 3114 nt3.37□□□□□ -1.87
VPS35P34110 YEL020C-BYEL020C-B 198 nt3.37□□□□□ -1.87
VPS35P34110 YGL014C-AYGL014C-A 162 nt3.37□□□□□ -1.87
VPS35P34110 SDH2YLL041C 801 nt3.37□□□□□ -1.87
VPS35P34110 ABF2YMR072W 552 nt3.37□□□□□ -1.87
VPS35P34110 YBL065WYBL065W 345 nt3.37□□□□□ -1.87
VPS35P34110 YNL198CYNL198C 303 nt3.37□□□□□ -1.87
VPS35P34110 RTC6YPL183W-A 282 nt3.37□□□□□ -1.87
VPS35P34110 DUF1YOL087C 3351 nt3.37□□□□□ -1.87
VPS35P34110 VAS1YGR094W 3315 nt3.37□□□□□ -1.87
VPS35P34110 CSR2YPR030W 3366 nt3.37□□□□□ -1.87
VPS35P34110 SAK1YER129W 3429 nt3.37□□□□□ -1.87
VPS35P34110 DBP10YDL031W 2988 nt3.36□□□□□ -1.87
VPS35P34110 ORC1YML065W 2745 nt3.36□□□□□ -1.87
VPS35P34110 MCD1YDL003W 1701 nt3.36□□□□□ -1.87
VPS35P34110 PHS1YJL097W 654 nt3.36□□□□□ -1.87
VPS35P34110 LSM7YNL147W 348 nt3.36□□□□□ -1.87
VPS35P34110 RGC1YPR115W 3252 nt3.36□□□□□ -1.87
VPS35P34110 MPH1YIR002C 2982 nt3.36□□□□□ -1.87
VPS35P34110 RBK1YCR036W 1002 nt3.35□□□□□ -1.87
VPS35P34110 YFH1YDL120W 525 nt3.35□□□□□ -1.87
VPS35P34110 YGL041CYGL041C 204 nt3.35□□□□□ -1.87
VPS35P34110 YIL032CYIL032C 357 nt3.35□□□□□ -1.87
VPS35P34110 YLR154C-HYLR154C-H 132 nt3.35□□□□□ -1.87
VPS35P34110 YLR156C-AYLR156C-A 132 nt3.35□□□□□ -1.87
VPS35P34110 YLR157C-CYLR157C-C 132 nt3.35□□□□□ -1.87
VPS35P34110 YLR159C-AYLR159C-A 132 nt3.35□□□□□ -1.87
VPS35P34110 RPL36AYMR194W 303 nt3.35□□□□□ -1.87
VPS35P34110 YOR008C-AYOR008C-A 225 nt3.35□□□□□ -1.87
VPS35P34110 YOR296WYOR296W 3870 nt3.35□□□□□ -1.87
VPS35P34110 DNL4YOR005C 2835 nt3.34□□□□□ -1.87
VPS35P34110 DYN1YKR054C 12279 nt3.34□□□□□ -1.87
VPS35P34110 YDL025W-AYDL025W-A 105 nt3.34□□□□□ -1.87
VPS35P34110 YJL222W-BYJL222W-B 138 nt3.34□□□□□ -1.87
VPS35P34110 YAL059C-AYAL059C-A 423 nt3.34□□□□□ -1.87
VPS35P34110 YLR012CYLR012C 300 nt3.34□□□□□ -1.87
VPS35P34110 SAR1YPL218W 573 nt3.34□□□□□ -1.87
VPS35P34110 HCS1YKL017C 2052 nt3.33□□□□□ -1.88
VPS35P34110 YHL042WYHL042W 453 nt3.33□□□□□ -1.88
VPS35P34110 RGR1YLR071C 3249 nt3.33□□□□□ -1.88
VPS35P34110 YCK3YER123W 1575 nt3.33□□□□□ -1.88
VPS35P34110 DOT6YER088C 2013 nt3.32□□□□□ -1.88
VPS35P34110 NAB3YPL190C 2409 nt3.32□□□□□ -1.88
VPS35P34110 PSK1YAL017W 4071 nt3.32□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 76.2 ms