Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 YHR214C-CYHR214C-C 1437 nt1.68□□□□□ -2.14
RPB9P27999 YHR130CYHR130C 336 nt1.68□□□□□ -2.14
RPB9P27999 CTK3YML112W 891 nt1.68□□□□□ -2.14
RPB9P27999 LSM7YNL147W 348 nt1.68□□□□□ -2.14
RPB9P27999 PET123YOR158W 957 nt1.68□□□□□ -2.14
RPB9P27999 FAB1YFR019W 6837 nt1.68□□□□□ -2.14
RPB9P27999 NUP82YJL061W 2142 nt1.67□□□□□ -2.14
RPB9P27999 SNX41YDR425W 1878 nt1.67□□□□□ -2.14
RPB9P27999 BIG1YHR101C 1008 nt1.67□□□□□ -2.14
RPB9P27999 ANS1YHR126C 480 nt1.67□□□□□ -2.14
RPB9P27999 SNC1YAL030W 354 nt1.67□□□□□ -2.14
RPB9P27999 SAS2YMR127C 1017 nt1.67□□□□□ -2.14
RPB9P27999 VTI1YMR197C 654 nt1.67□□□□□ -2.14
RPB9P27999 ATX2YOR079C 942 nt1.67□□□□□ -2.14
RPB9P27999 MPH1YIR002C 2982 nt1.67□□□□□ -2.14
RPB9P27999 NIC96YFR002W 2520 nt1.67□□□□□ -2.14
RPB9P27999 YOR093CYOR093C 4947 nt1.66□□□□□ -2.14
RPB9P27999 SPE1YKL184W 1401 nt1.66□□□□□ -2.14
RPB9P27999 BFA1YJR053W 1725 nt1.66□□□□□ -2.14
RPB9P27999 BRE1YDL074C 2103 nt1.66□□□□□ -2.14
RPB9P27999 RPL27BYDR471W 411 nt1.66□□□□□ -2.14
RPB9P27999 RPC10YHR143W-A 213 nt1.66□□□□□ -2.14
RPB9P27999 RPI1YIL119C 1224 nt1.66□□□□□ -2.14
RPB9P27999 FYV7YLR068W 456 nt1.66□□□□□ -2.14
RPB9P27999 SEN15YMR059W 387 nt1.66□□□□□ -2.14
RPB9P27999 SIP18YMR175W 240 nt1.66□□□□□ -2.14
RPB9P27999 MRPL44YMR225C 297 nt1.66□□□□□ -2.14
RPB9P27999 SEC31YDL195W 3822 nt1.66□□□□□ -2.14
RPB9P27999 YOL098CYOL098C 3114 nt1.66□□□□□ -2.14
RPB9P27999 VPH1YOR270C 2523 nt1.66□□□□□ -2.14
RPB9P27999 YHR214C-BYHR214C-B 5382 nt1.66□□□□□ -2.14
RPB9P27999 YEL018C-AYEL018C-A 534 nt1.65□□□□□ -2.15
RPB9P27999 YER172C-AYER172C-A 381 nt1.65□□□□□ -2.15
RPB9P27999 YGR045CYGR045C 363 nt1.65□□□□□ -2.15
RPB9P27999 tT(UGU)Q1tT(UGU)Q1 76 nt1.65□□□□□ -2.15
RPB9P27999 YJR079WYJR079W 330 nt1.65□□□□□ -2.15
RPB9P27999 UTP30YKR060W 825 nt1.65□□□□□ -2.15
RPB9P27999 IRC19YLL033W 693 nt1.65□□□□□ -2.15
RPB9P27999 SLM6YBR266C 453 nt1.65□□□□□ -2.15
RPB9P27999 YBR012W-AYBR012W-A 1323 nt1.65□□□□□ -2.15
RPB9P27999 YOR142W-AYOR142W-A 1323 nt1.65□□□□□ -2.15
RPB9P27999 YOR192C-AYOR192C-A 1317 nt1.65□□□□□ -2.15
RPB9P27999 YPR158W-AYPR158W-A 1323 nt1.65□□□□□ -2.15
RPB9P27999 MCD1YDL003W 1701 nt1.64□□□□□ -2.15
RPB9P27999 YPR097WYPR097W 3222 nt1.64□□□□□ -2.15
RPB9P27999 NOP10YHR072W-A 177 nt1.64□□□□□ -2.15
RPB9P27999 YLR154W-AYLR154W-A 186 nt1.64□□□□□ -2.15
RPB9P27999 GRX8YLR364W 330 nt1.64□□□□□ -2.15
RPB9P27999 COX7YMR256C 183 nt1.64□□□□□ -2.15
RPB9P27999 ATP19YOL077W-A 207 nt1.64□□□□□ -2.15
RPB9P27999 RPB5YBR154C 648 nt1.64□□□□□ -2.15
RPB9P27999 MSS11YMR164C 2277 nt1.64□□□□□ -2.15
RPB9P27999 MUD2YKL074C 1584 nt1.64□□□□□ -2.15
RPB9P27999 NAN1YPL126W 2691 nt1.63□□□□□ -2.15
RPB9P27999 PPN1YDR452W 2025 nt1.63□□□□□ -2.15
RPB9P27999 IRC10YOL015W 1761 nt1.63□□□□□ -2.15
RPB9P27999 YER188C-AYER188C-A 300 nt1.63□□□□□ -2.15
RPB9P27999 VOA1YGR106C 798 nt1.63□□□□□ -2.15
RPB9P27999 MSL1YIR009W 336 nt1.63□□□□□ -2.15
RPB9P27999 NCE101YJL205C 162 nt1.63□□□□□ -2.15
RPB9P27999 ROX1YPR065W 1107 nt1.63□□□□□ -2.15
RPB9P27999 ARP7YPR034W 1434 nt1.63□□□□□ -2.15
RPB9P27999 TRL1YJL087C 2484 nt1.63□□□□□ -2.15
RPB9P27999 CRM1YGR218W 3255 nt1.63□□□□□ -2.15
RPB9P27999 IPT1YDR072C 1584 nt1.63□□□□□ -2.15
RPB9P27999 YJR098CYJR098C 1971 nt1.63□□□□□ -2.15
RPB9P27999 CDC60YPL160W 3273 nt1.62□□□□□ -2.15
RPB9P27999 PET309YLR067C 2898 nt1.62□□□□□ -2.15
RPB9P27999 ELG1YOR144C 2376 nt1.62□□□□□ -2.15
RPB9P27999 COX13YGL191W 390 nt1.62□□□□□ -2.15
RPB9P27999 RRF1YHR038W 693 nt1.62□□□□□ -2.15
RPB9P27999 YKR051WYKR051W 1257 nt1.62□□□□□ -2.15
RPB9P27999 YBR076C-AYBR076C-A 267 nt1.62□□□□□ -2.15
RPB9P27999 COS111YBR203W 2775 nt1.62□□□□□ -2.15
RPB9P27999 VPS52YDR484W 1926 nt1.62□□□□□ -2.15
RPB9P27999 RNH70YGR276C 1662 nt1.61□□□□□ -2.15
RPB9P27999 SAP185YJL098W 3177 nt1.61□□□□□ -2.15
RPB9P27999 RPF1YHR088W 888 nt1.61□□□□□ -2.15
RPB9P27999 YML108WYML108W 318 nt1.61□□□□□ -2.15
RPB9P27999 SNC2YOR327C 348 nt1.61□□□□□ -2.15
RPB9P27999 YOR333CYOR333C 417 nt1.61□□□□□ -2.15
RPB9P27999 TSC3YBR058C-A 243 nt1.61□□□□□ -2.15
RPB9P27999 SPC72YAL047C 1869 nt1.6□□□□□ -2.15
RPB9P27999 KAR3YPR141C 2190 nt1.6□□□□□ -2.15
RPB9P27999 YER084W-AYER084W-A 513 nt1.6□□□□□ -2.15
RPB9P27999 BI2Q0110 1272 nt1.6□□□□□ -2.15
RPB9P27999 SMD1YGR074W 441 nt1.6□□□□□ -2.15
RPB9P27999 ECL1YGR146C 636 nt1.6□□□□□ -2.15
RPB9P27999 LSO2YGR169C-A 279 nt1.6□□□□□ -2.15
RPB9P27999 YHR214W-AYHR214W-A 486 nt1.6□□□□□ -2.15
RPB9P27999 YLR171WYLR171W 390 nt1.6□□□□□ -2.15
RPB9P27999 YAR068WYAR068W 486 nt1.6□□□□□ -2.15
RPB9P27999 YMR324CYMR324C 243 nt1.6□□□□□ -2.15
RPB9P27999 SPC29YPL124W 762 nt1.6□□□□□ -2.15
RPB9P27999 RTC6YPL183W-A 282 nt1.6□□□□□ -2.15
RPB9P27999 CDC53YDL132W 2448 nt1.6□□□□□ -2.15
RPB9P27999 RIC1YLR039C 3171 nt1.6□□□□□ -2.15
RPB9P27999 RTT101YJL047C 2529 nt1.6□□□□□ -2.15
RPB9P27999 SNF5YBR289W 2718 nt1.6□□□□□ -2.15
RPB9P27999 MNE1YOR350C 1992 nt1.59□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 35.7 ms