Protein–RNA interactions for Protein: P0CX57

TY1A-A, Transposon Ty1-A Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-AP0CX57 AKL1YBR059C 3327 nt3.96□□□□□ -1.78
TY1A-AP0CX57 GIS4YML006C 2325 nt3.95□□□□□ -1.78
TY1A-AP0CX57 YCG1YDR325W 3108 nt3.95□□□□□ -1.78
TY1A-AP0CX57 YDR545C-AYDR545C-A 480 nt3.95□□□□□ -1.78
TY1A-AP0CX57 YOR073W-AYOR073W-A 234 nt3.95□□□□□ -1.78
TY1A-AP0CX57 SWI1YPL016W 3945 nt3.94□□□□□ -1.78
TY1A-AP0CX57 RPG1YBR079C 2895 nt3.94□□□□□ -1.78
TY1A-AP0CX57 CLN3YAL040C 1743 nt3.93□□□□□ -1.78
TY1A-AP0CX57 DBP7YKR024C 2229 nt3.93□□□□□ -1.78
TY1A-AP0CX57 YNL211CYNL211C 261 nt3.93□□□□□ -1.78
TY1A-AP0CX57 VPH1YOR270C 2523 nt3.93□□□□□ -1.78
TY1A-AP0CX57 YPK9YOR291W 4419 nt3.92□□□□□ -1.78
TY1A-AP0CX57 SOK1YDR006C 2706 nt3.92□□□□□ -1.78
TY1A-AP0CX57 VMA9YCL005W-A 222 nt3.92□□□□□ -1.78
TY1A-AP0CX57 VMA1YDL185W 3216 nt3.92□□□□□ -1.78
TY1A-AP0CX57 EXO84YBR102C 2262 nt3.92□□□□□ -1.78
TY1A-AP0CX57 PHO8YDR481C 1701 nt3.92□□□□□ -1.78
TY1A-AP0CX57 PTC5YOR090C 1719 nt3.92□□□□□ -1.78
TY1A-AP0CX57 ECM22YLR228C 2445 nt3.91□□□□□ -1.78
TY1A-AP0CX57 YLR352WYLR352W 2424 nt3.91□□□□□ -1.78
TY1A-AP0CX57 DIP2YLR129W 2832 nt3.91□□□□□ -1.78
TY1A-AP0CX57 INP2YMR163C 2118 nt3.91□□□□□ -1.78
TY1A-AP0CX57 EGT2YNL327W 3126 nt3.9□□□□□ -1.78
TY1A-AP0CX57 EMC6YLL014W 327 nt3.89□□□□□ -1.79
TY1A-AP0CX57 YBL006W-AYBL006W-A 150 nt3.89□□□□□ -1.79
TY1A-AP0CX57 BCH1YMR237W 2175 nt3.89□□□□□ -1.79
TY1A-AP0CX57 PEP5YMR231W 3090 nt3.89□□□□□ -1.79
TY1A-AP0CX57 YIL174WYIL174W 228 nt3.88□□□□□ -1.79
TY1A-AP0CX57 YJL222W-AYJL222W-A 228 nt3.88□□□□□ -1.79
TY1A-AP0CX57 YAR019W-AYAR019W-A 333 nt3.88□□□□□ -1.79
TY1A-AP0CX57 RSM19YNR037C 276 nt3.88□□□□□ -1.79
TY1A-AP0CX57 snR45snR45 172 nt3.88□□□□□ -1.79
TY1A-AP0CX57 BNI4YNL233W 2679 nt3.88□□□□□ -1.79
TY1A-AP0CX57 SGD1YLR336C 2700 nt3.87□□□□□ -1.79
TY1A-AP0CX57 REG1YDR028C 3045 nt3.87□□□□□ -1.79
TY1A-AP0CX57 NCA2YPR155C 1851 nt3.87□□□□□ -1.79
TY1A-AP0CX57 PSK2YOL045W 3306 nt3.87□□□□□ -1.79
TY1A-AP0CX57 PRP22YER013W 3438 nt3.87□□□□□ -1.79
TY1A-AP0CX57 SEC15YGL233W 2733 nt3.86□□□□□ -1.79
TY1A-AP0CX57 YML116W-AYML116W-A 303 nt3.86□□□□□ -1.79
TY1A-AP0CX57 SNF2YOR290C 5112 nt3.86□□□□□ -1.79
TY1A-AP0CX57 PAA1YDR071C 576 nt3.85□□□□□ -1.79
TY1A-AP0CX57 YGR050CYGR050C 357 nt3.85□□□□□ -1.79
TY1A-AP0CX57 RPL25YOL127W 429 nt3.85□□□□□ -1.79
TY1A-AP0CX57 TIM12YBR091C 330 nt3.85□□□□□ -1.79
TY1A-AP0CX57 JEN1YKL217W 1851 nt3.85□□□□□ -1.79
TY1A-AP0CX57 GSC2YGR032W 5688 nt3.85□□□□□ -1.79
TY1A-AP0CX57 TMA108YIL137C 2841 nt3.85□□□□□ -1.79
TY1A-AP0CX57 SRO7YPR032W 3102 nt3.84□□□□□ -1.79
TY1A-AP0CX57 ZRG17YNR039C 1818 nt3.84□□□□□ -1.79
TY1A-AP0CX57 HYP2YEL034W 474 nt3.84□□□□□ -1.79
TY1A-AP0CX57 YMR31YFR049W 372 nt3.84□□□□□ -1.79
TY1A-AP0CX57 BRE4YDL231C 3378 nt3.84□□□□□ -1.79
TY1A-AP0CX57 KGD1YIL125W 3045 nt3.84□□□□□ -1.8
TY1A-AP0CX57 CHS3YBR023C 3498 nt3.83□□□□□ -1.8
TY1A-AP0CX57 NTO1YPR031W 2247 nt3.83□□□□□ -1.8
TY1A-AP0CX57 OST4YDL232W 111 nt3.83□□□□□ -1.8
TY1A-AP0CX57 YEL032C-AYEL032C-A 162 nt3.83□□□□□ -1.8
TY1A-AP0CX57 CMC4YMR194C-B 222 nt3.83□□□□□ -1.8
TY1A-AP0CX57 YDR034C-DYDR034C-D 5313 nt3.83□□□□□ -1.8
TY1A-AP0CX57 USA1YML029W 2517 nt3.83□□□□□ -1.8
TY1A-AP0CX57 CCM1YGR150C 2595 nt3.82□□□□□ -1.8
TY1A-AP0CX57 ATG2YNL242W 4779 nt3.82□□□□□ -1.8
TY1A-AP0CX57 RLI1YDR091C 1827 nt3.81□□□□□ -1.8
TY1A-AP0CX57 FAR1YJL157C 2493 nt3.81□□□□□ -1.8
TY1A-AP0CX57 tS(GCU)Q1tS(GCU)Q1 86 nt3.81□□□□□ -1.8
TY1A-AP0CX57 YIL165CYIL165C 360 nt3.81□□□□□ -1.8
TY1A-AP0CX57 GRX8YLR364W 330 nt3.81□□□□□ -1.8
TY1A-AP0CX57 RTC6YPL183W-A 282 nt3.81□□□□□ -1.8
TY1A-AP0CX57 BCK2YER167W 2556 nt3.81□□□□□ -1.8
TY1A-AP0CX57 MET10YFR030W 3108 nt3.81□□□□□ -1.8
TY1A-AP0CX57 TRK1YJL129C 3708 nt3.8□□□□□ -1.8
TY1A-AP0CX57 MPT5YGL178W 2580 nt3.8□□□□□ -1.8
TY1A-AP0CX57 ULS1YOR191W 4860 nt3.8□□□□□ -1.8
TY1A-AP0CX57 YBR206WYBR206W 324 nt3.8□□□□□ -1.8
TY1A-AP0CX57 NUP133YKR082W 3474 nt3.8□□□□□ -1.8
TY1A-AP0CX57 PSO2YMR137C 1986 nt3.8□□□□□ -1.8
TY1A-AP0CX57 MCD4YKL165C 2760 nt3.8□□□□□ -1.8
TY1A-AP0CX57 HOS3YPL116W 2094 nt3.79□□□□□ -1.8
TY1A-AP0CX57 RPL22AYLR061W 366 nt3.79□□□□□ -1.8
TY1A-AP0CX57 MTR10YOR160W 2919 nt3.79□□□□□ -1.8
TY1A-AP0CX57 FLO8YER109C 2400 nt3.79□□□□□ -1.8
TY1A-AP0CX57 NAB3YPL190C 2409 nt3.79□□□□□ -1.8
TY1A-AP0CX57 snR7-SsnR7-S 179 nt3.78□□□□□ -1.8
TY1A-AP0CX57 YGL014C-AYGL014C-A 162 nt3.78□□□□□ -1.8
TY1A-AP0CX57 YGR022CYGR022C 330 nt3.78□□□□□ -1.8
TY1A-AP0CX57 YAL044W-AYAL044W-A 333 nt3.78□□□□□ -1.8
TY1A-AP0CX57 YNR075C-AYNR075C-A 93 nt3.78□□□□□ -1.8
TY1A-AP0CX57 PUF4YGL014W 2667 nt3.77□□□□□ -1.81
TY1A-AP0CX57 RSN1YMR266W 2862 nt3.77□□□□□ -1.81
TY1A-AP0CX57 YBR174CYBR174C 315 nt3.77□□□□□ -1.81
TY1A-AP0CX57 TOP1YOL006C 2310 nt3.77□□□□□ -1.81
TY1A-AP0CX57 RRM3YHR031C 2172 nt3.76□□□□□ -1.81
TY1A-AP0CX57 GIS1YDR096W 2685 nt3.76□□□□□ -1.81
TY1A-AP0CX57 POM152YMR129W 4014 nt3.76□□□□□ -1.81
TY1A-AP0CX57 TIM11YDR322C-A 291 nt3.76□□□□□ -1.81
TY1A-AP0CX57 YLR146W-AYLR146W-A 189 nt3.76□□□□□ -1.81
TY1A-AP0CX57 VPS34YLR240W 2628 nt3.76□□□□□ -1.81
TY1A-AP0CX57 HAL9YOL089C 3093 nt3.76□□□□□ -1.81
TY1A-AP0CX57 AHC1YOR023C 1701 nt3.75□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 70.2 ms