Protein–RNA interactions for Protein: P0C2J0

TY1B-PR2, Transposon Ty1-PR2 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,756 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR2P0C2J0 YCR108CYCR108C 192 nt0.53□□□□□ -2.32
TY1B-PR2P0C2J0 YGL177WYGL177W 348 nt0.53□□□□□ -2.32
TY1B-PR2P0C2J0 YHR022CYHR022C 771 nt0.53□□□□□ -2.32
TY1B-PR2P0C2J0 SPO12YHR152W 522 nt0.53□□□□□ -2.32
TY1B-PR2P0C2J0 YIR036W-AYIR036W-A 402 nt0.53□□□□□ -2.32
TY1B-PR2P0C2J0 PFK27YOL136C 1194 nt0.53□□□□□ -2.32
TY1B-PR2P0C2J0 SPO77YLR341W 1434 nt0.53□□□□□ -2.33
TY1B-PR2P0C2J0 CSE1YGL238W 2883 nt0.53□□□□□ -2.33
TY1B-PR2P0C2J0 DSE2YHR143W 978 nt0.52□□□□□ -2.33
TY1B-PR2P0C2J0 YPR159C-AYPR159C-A 102 nt0.52□□□□□ -2.33
TY1B-PR2P0C2J0 snR191snR191 274 nt0.52□□□□□ -2.33
TY1B-PR2P0C2J0 MYO1YHR023W 5787 nt0.51□□□□□ -2.33
TY1B-PR2P0C2J0 CDC27YBL084C 2277 nt0.51□□□□□ -2.33
TY1B-PR2P0C2J0 YER091C-AYER091C-A 222 nt0.51□□□□□ -2.33
TY1B-PR2P0C2J0 EPT1YHR123W 1176 nt0.51□□□□□ -2.33
TY1B-PR2P0C2J0 YNL179CYNL179C 438 nt0.51□□□□□ -2.33
TY1B-PR2P0C2J0 YBR063CYBR063C 1215 nt0.51□□□□□ -2.33
TY1B-PR2P0C2J0 YCR015CYCR015C 954 nt0.5□□□□□ -2.33
TY1B-PR2P0C2J0 YFR056CYFR056C 369 nt0.5□□□□□ -2.33
TY1B-PR2P0C2J0 RPL6BYLR448W 531 nt0.5□□□□□ -2.33
TY1B-PR2P0C2J0 YCR102W-AYCR102W-A 198 nt0.5□□□□□ -2.33
TY1B-PR2P0C2J0 RRG1YDR065W 1098 nt0.5□□□□□ -2.33
TY1B-PR2P0C2J0 WAR1YML076C 2835 nt0.49□□□□□ -2.33
TY1B-PR2P0C2J0 RIF2YLR453C 1188 nt0.49□□□□□ -2.33
TY1B-PR2P0C2J0 YGL118CYGL118C 438 nt0.48□□□□□ -2.33
TY1B-PR2P0C2J0 YGR114CYGR114C 390 nt0.48□□□□□ -2.33
TY1B-PR2P0C2J0 FYV4YHR059W 393 nt0.48□□□□□ -2.33
TY1B-PR2P0C2J0 YLL007CYLL007C 1998 nt0.48□□□□□ -2.33
TY1B-PR2P0C2J0 RGI1YER067W 486 nt0.47□□□□□ -2.33
TY1B-PR2P0C2J0 YGL138CYGL138C 1038 nt0.47□□□□□ -2.33
TY1B-PR2P0C2J0 RPS10AYOR293W 318 nt0.47□□□□□ -2.33
TY1B-PR2P0C2J0 YML002WYML002W 2214 nt0.47□□□□□ -2.33
TY1B-PR2P0C2J0 DGR2YKL121W 2559 nt0.47□□□□□ -2.33
TY1B-PR2P0C2J0 DSE1YER124C 1722 nt0.47□□□□□ -2.33
TY1B-PR2P0C2J0 HIR3YJR140C 4947 nt0.47□□□□□ -2.33
TY1B-PR2P0C2J0 ALK1YGL021W 2283 nt0.46□□□□□ -2.34
TY1B-PR2P0C2J0 MVP1YMR004W 1536 nt0.46□□□□□ -2.34
TY1B-PR2P0C2J0 RPL38YLR325C 237 nt0.46□□□□□ -2.34
TY1B-PR2P0C2J0 SPP381YBR152W 876 nt0.46□□□□□ -2.34
TY1B-PR2P0C2J0 YGR250CYGR250C 2346 nt0.45□□□□□ -2.34
TY1B-PR2P0C2J0 CDC5YMR001C 2118 nt0.45□□□□□ -2.34
TY1B-PR2P0C2J0 LSM7YNL147W 348 nt0.45□□□□□ -2.34
TY1B-PR2P0C2J0 UFE1YOR075W 1041 nt0.45□□□□□ -2.34
TY1B-PR2P0C2J0 YDR042CYDR042C 603 nt0.45□□□□□ -2.34
TY1B-PR2P0C2J0 YIP1YGR172C 747 nt0.45□□□□□ -2.34
TY1B-PR2P0C2J0 BNS1YGR230W 414 nt0.45□□□□□ -2.34
TY1B-PR2P0C2J0 FIG1YBR040W 897 nt0.45□□□□□ -2.34
TY1B-PR2P0C2J0 SRB4YER022W 2064 nt0.44□□□□□ -2.34
TY1B-PR2P0C2J0 UPF3YGR072W 1164 nt0.44□□□□□ -2.34
TY1B-PR2P0C2J0 CMC2YBL059C-A 330 nt0.44□□□□□ -2.34
TY1B-PR2P0C2J0 CYB5YNL111C 363 nt0.44□□□□□ -2.34
TY1B-PR2P0C2J0 YDR210W-AYDR210W-A 1317 nt0.44□□□□□ -2.34
TY1B-PR2P0C2J0 YOR343W-AYOR343W-A 1317 nt0.44□□□□□ -2.34
TY1B-PR2P0C2J0 HYR1YIR037W 492 nt0.43□□□□□ -2.34
TY1B-PR2P0C2J0 YMR178WYMR178W 825 nt0.43□□□□□ -2.34
TY1B-PR2P0C2J0 MER1YNL210W 813 nt0.43□□□□□ -2.34
TY1B-PR2P0C2J0 YEL009C-AYEL009C-A 408 nt0.42□□□□□ -2.34
TY1B-PR2P0C2J0 YER088C-AYER088C-A 324 nt0.42□□□□□ -2.34
TY1B-PR2P0C2J0 SMD1YGR074W 441 nt0.42□□□□□ -2.34
TY1B-PR2P0C2J0 SVP26YHR181W 687 nt0.42□□□□□ -2.34
TY1B-PR2P0C2J0 YHL009W-AYHL009W-A 1242 nt0.41□□□□□ -2.34
TY1B-PR2P0C2J0 YDR286CYDR286C 345 nt0.4□□□□□ -2.35
TY1B-PR2P0C2J0 RAM2YKL019W 951 nt0.4□□□□□ -2.35
TY1B-PR2P0C2J0 MGR1YCL044C 1254 nt0.4□□□□□ -2.35
TY1B-PR2P0C2J0 ADF1YCL058W-A 342 nt0.4□□□□□ -2.35
TY1B-PR2P0C2J0 LYS14YDR034C 2373 nt0.4□□□□□ -2.35
TY1B-PR2P0C2J0 snR68snR68 136 nt0.4□□□□□ -2.35
TY1B-PR2P0C2J0 YGL039WYGL039W 1047 nt0.4□□□□□ -2.35
TY1B-PR2P0C2J0 YIM2YMR151W 438 nt0.4□□□□□ -2.35
TY1B-PR2P0C2J0 YBL094CYBL094C 333 nt0.39□□□□□ -2.35
TY1B-PR2P0C2J0 ARL3YPL051W 597 nt0.39□□□□□ -2.35
TY1B-PR2P0C2J0 YLL054CYLL054C 2532 nt0.38□□□□□ -2.35
TY1B-PR2P0C2J0 PRS3YHL011C 963 nt0.38□□□□□ -2.35
TY1B-PR2P0C2J0 YIL012WYIL012W 342 nt0.38□□□□□ -2.35
TY1B-PR2P0C2J0 snR35snR35 204 nt0.38□□□□□ -2.35
TY1B-PR2P0C2J0 snR45snR45 172 nt0.38□□□□□ -2.35
TY1B-PR2P0C2J0 PCL2YDL127W 927 nt0.37□□□□□ -2.35
TY1B-PR2P0C2J0 ABM1YJR108W 372 nt0.37□□□□□ -2.35
TY1B-PR2P0C2J0 SNA4YDL123W 423 nt0.37□□□□□ -2.35
TY1B-PR2P0C2J0 YDR248CYDR248C 582 nt0.37□□□□□ -2.35
TY1B-PR2P0C2J0 EDC1YGL222C 528 nt0.37□□□□□ -2.35
TY1B-PR2P0C2J0 SEC22YLR268W 645 nt0.37□□□□□ -2.35
TY1B-PR2P0C2J0 IRC14YOR135C 342 nt0.37□□□□□ -2.35
TY1B-PR2P0C2J0 YFR054CYFR054C 579 nt0.36□□□□□ -2.35
TY1B-PR2P0C2J0 REX3YLR107W 1215 nt0.36□□□□□ -2.35
TY1B-PR2P0C2J0 UAF30YOR295W 687 nt0.36□□□□□ -2.35
TY1B-PR2P0C2J0 MRPL40YPL173W 894 nt0.36□□□□□ -2.35
TY1B-PR2P0C2J0 CIN2YPL241C 807 nt0.35□□□□□ -2.35
TY1B-PR2P0C2J0 RPB5YBR154C 648 nt0.35□□□□□ -2.35
TY1B-PR2P0C2J0 SMY1YKL079W 1971 nt0.35□□□□□ -2.35
TY1B-PR2P0C2J0 SLU7YDR088C 1149 nt0.34□□□□□ -2.35
TY1B-PR2P0C2J0 HOP2YGL033W 657 nt0.34□□□□□ -2.35
TY1B-PR2P0C2J0 YJL026C-AYJL026C-A 222 nt0.34□□□□□ -2.35
TY1B-PR2P0C2J0 PSO2YMR137C 1986 nt0.34□□□□□ -2.35
TY1B-PR2P0C2J0 BFR1YOR198C 1413 nt0.34□□□□□ -2.35
TY1B-PR2P0C2J0 SMB1YER029C 591 nt0.34□□□□□ -2.36
TY1B-PR2P0C2J0 PRM8YGL053W 714 nt0.34□□□□□ -2.36
TY1B-PR2P0C2J0 YLR402WYLR402W 192 nt0.34□□□□□ -2.36
TY1B-PR2P0C2J0 YNL089CYNL089C 477 nt0.34□□□□□ -2.36
TY1B-PR2P0C2J0 AIM9YER080W 1884 nt0.34□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 74.2 ms