Protein–RNA interactions for Protein: P0C2I8

TY1A-LR4, Transposon Ty1-LR4 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR4P0C2I8 ALK2YBL009W 2031 nt3.22□□□□□ -1.89
TY1A-LR4P0C2I8 PUF4YGL014W 2667 nt3.22□□□□□ -1.89
TY1A-LR4P0C2I8 ANB1YJR047C 474 nt3.21□□□□□ -1.9
TY1A-LR4P0C2I8 YLR140WYLR140W 327 nt3.21□□□□□ -1.9
TY1A-LR4P0C2I8 TRS120YDR407C 3870 nt3.21□□□□□ -1.9
TY1A-LR4P0C2I8 GCR1YPL075W 2358 nt3.2□□□□□ -1.9
TY1A-LR4P0C2I8 KAP95YLR347C 2586 nt3.2□□□□□ -1.9
TY1A-LR4P0C2I8 snR85snR85 171 nt3.2□□□□□ -1.9
TY1A-LR4P0C2I8 YGL069CYGL069C 465 nt3.2□□□□□ -1.9
TY1A-LR4P0C2I8 MRPL39YML009C 213 nt3.2□□□□□ -1.9
TY1A-LR4P0C2I8 YNR042WYNR042W 429 nt3.2□□□□□ -1.9
TY1A-LR4P0C2I8 FEX2YPL279C 1128 nt3.2□□□□□ -1.9
TY1A-LR4P0C2I8 NPR3YHL023C 3441 nt3.2□□□□□ -1.9
TY1A-LR4P0C2I8 SGD1YLR336C 2700 nt3.2□□□□□ -1.9
TY1A-LR4P0C2I8 RLI1YDR091C 1827 nt3.19□□□□□ -1.9
TY1A-LR4P0C2I8 SMC3YJL074C 3693 nt3.19□□□□□ -1.9
TY1A-LR4P0C2I8 TOF2YKR010C 2316 nt3.19□□□□□ -1.9
TY1A-LR4P0C2I8 YPR022CYPR022C 3402 nt3.19□□□□□ -1.9
TY1A-LR4P0C2I8 YDR426CYDR426C 378 nt3.19□□□□□ -1.9
TY1A-LR4P0C2I8 tV(CAC)DtV(CAC)D 73 nt3.19□□□□□ -1.9
TY1A-LR4P0C2I8 tV(CAC)HtV(CAC)H 73 nt3.19□□□□□ -1.9
TY1A-LR4P0C2I8 YIL020C-AYIL020C-A 339 nt3.19□□□□□ -1.9
TY1A-LR4P0C2I8 SMC2YFR031C 3513 nt3.18□□□□□ -1.9
TY1A-LR4P0C2I8 ORC1YML065W 2745 nt3.18□□□□□ -1.9
TY1A-LR4P0C2I8 LCD1YDR499W 2244 nt3.18□□□□□ -1.9
TY1A-LR4P0C2I8 YJL135WYJL135W 318 nt3.18□□□□□ -1.9
TY1A-LR4P0C2I8 SPA2YLL021W 4401 nt3.18□□□□□ -1.9
TY1A-LR4P0C2I8 YAK1YJL141C 2424 nt3.18□□□□□ -1.9
TY1A-LR4P0C2I8 IPT1YDR072C 1584 nt3.17□□□□□ -1.9
TY1A-LR4P0C2I8 YDL025W-AYDL025W-A 105 nt3.17□□□□□ -1.9
TY1A-LR4P0C2I8 FMP32YFL046W 624 nt3.17□□□□□ -1.9
TY1A-LR4P0C2I8 YLR120W-AYLR120W-A 102 nt3.17□□□□□ -1.9
TY1A-LR4P0C2I8 YMR321CYMR321C 318 nt3.17□□□□□ -1.9
TY1A-LR4P0C2I8 VMA9YCL005W-A 222 nt3.17□□□□□ -1.9
TY1A-LR4P0C2I8 IKI3YLR384C 4050 nt3.17□□□□□ -1.9
TY1A-LR4P0C2I8 YAT2YER024W 2772 nt3.17□□□□□ -1.9
TY1A-LR4P0C2I8 BCH1YMR237W 2175 nt3.17□□□□□ -1.9
TY1A-LR4P0C2I8 YKU70YMR284W 1809 nt3.16□□□□□ -1.9
TY1A-LR4P0C2I8 PAN3YKL025C 2040 nt3.16□□□□□ -1.9
TY1A-LR4P0C2I8 RRT15YLR162W-A 189 nt3.16□□□□□ -1.9
TY1A-LR4P0C2I8 RTC6YPL183W-A 282 nt3.16□□□□□ -1.9
TY1A-LR4P0C2I8 PRE4YFR050C 801 nt3.15□□□□□ -1.91
TY1A-LR4P0C2I8 PSY2YNL201C 2577 nt3.15□□□□□ -1.91
TY1A-LR4P0C2I8 YJL070CYJL070C 2667 nt3.15□□□□□ -1.91
TY1A-LR4P0C2I8 GUP1YGL084C 1683 nt3.14□□□□□ -1.91
TY1A-LR4P0C2I8 snR76snR76 109 nt3.14□□□□□ -1.91
TY1A-LR4P0C2I8 TRX1YLR043C 312 nt3.14□□□□□ -1.91
TY1A-LR4P0C2I8 FPR1YNL135C 345 nt3.14□□□□□ -1.91
TY1A-LR4P0C2I8 NUT2YPR168W 474 nt3.14□□□□□ -1.91
TY1A-LR4P0C2I8 NAB3YPL190C 2409 nt3.14□□□□□ -1.91
TY1A-LR4P0C2I8 MPH1YIR002C 2982 nt3.13□□□□□ -1.91
TY1A-LR4P0C2I8 RTC1YOL138C 4026 nt3.13□□□□□ -1.91
TY1A-LR4P0C2I8 PFK26YIL107C 2484 nt3.13□□□□□ -1.91
TY1A-LR4P0C2I8 GIS4YML006C 2325 nt3.13□□□□□ -1.91
TY1A-LR4P0C2I8 FLO9YAL063C 3969 nt3.13□□□□□ -1.91
TY1A-LR4P0C2I8 ERP6YGL002W 651 nt3.13□□□□□ -1.91
TY1A-LR4P0C2I8 GRX8YLR364W 330 nt3.13□□□□□ -1.91
TY1A-LR4P0C2I8 YBR224WYBR224W 516 nt3.13□□□□□ -1.91
TY1A-LR4P0C2I8 YNR065CYNR065C 3351 nt3.13□□□□□ -1.91
TY1A-LR4P0C2I8 PKH1YDR490C 2301 nt3.13□□□□□ -1.91
TY1A-LR4P0C2I8 TSC11YER093C 4293 nt3.13□□□□□ -1.91
TY1A-LR4P0C2I8 RSF2YJR127C 4143 nt3.12□□□□□ -1.91
TY1A-LR4P0C2I8 MET5YJR137C 4329 nt3.12□□□□□ -1.91
TY1A-LR4P0C2I8 KSP1YHR082C 3090 nt3.12□□□□□ -1.91
TY1A-LR4P0C2I8 YAL064W-BYAL064W-B 381 nt3.12□□□□□ -1.91
TY1A-LR4P0C2I8 UPS1YLR193C 528 nt3.12□□□□□ -1.91
TY1A-LR4P0C2I8 PTC5YOR090C 1719 nt3.12□□□□□ -1.91
TY1A-LR4P0C2I8 CHO2YGR157W 2610 nt3.12□□□□□ -1.91
TY1A-LR4P0C2I8 SAK1YER129W 3429 nt3.12□□□□□ -1.91
TY1A-LR4P0C2I8 COS111YBR203W 2775 nt3.12□□□□□ -1.91
TY1A-LR4P0C2I8 DAN4YJR151C 3486 nt3.12□□□□□ -1.91
TY1A-LR4P0C2I8 ENA5YDR038C 3276 nt3.11□□□□□ -1.91
TY1A-LR4P0C2I8 ENA2YDR039C 3276 nt3.11□□□□□ -1.91
TY1A-LR4P0C2I8 ENA1YDR040C 3276 nt3.11□□□□□ -1.91
TY1A-LR4P0C2I8 VPH1YOR270C 2523 nt3.11□□□□□ -1.91
TY1A-LR4P0C2I8 PEX8YGR077C 1770 nt3.11□□□□□ -1.91
TY1A-LR4P0C2I8 YGR164WYGR164W 336 nt3.11□□□□□ -1.91
TY1A-LR4P0C2I8 YLR255CYLR255C 354 nt3.11□□□□□ -1.91
TY1A-LR4P0C2I8 GOT1YMR292W 417 nt3.11□□□□□ -1.91
TY1A-LR4P0C2I8 LSM7YNL147W 348 nt3.11□□□□□ -1.91
TY1A-LR4P0C2I8 YPR002C-AYPR002C-A 198 nt3.11□□□□□ -1.91
TY1A-LR4P0C2I8 YEL025CYEL025C 3567 nt3.11□□□□□ -1.91
TY1A-LR4P0C2I8 EFR3YMR212C 2349 nt3.11□□□□□ -1.91
TY1A-LR4P0C2I8 PDE2YOR360C 1581 nt3.11□□□□□ -1.91
TY1A-LR4P0C2I8 TMN3YER113C 2121 nt3.11□□□□□ -1.91
TY1A-LR4P0C2I8 RPA135YPR010C 3612 nt3.11□□□□□ -1.91
TY1A-LR4P0C2I8 CFT2YLR115W 2580 nt3.1□□□□□ -1.91
TY1A-LR4P0C2I8 GLC3YEL011W 2115 nt3.1□□□□□ -1.91
TY1A-LR4P0C2I8 COA4YLR218C 453 nt3.1□□□□□ -1.91
TY1A-LR4P0C2I8 RGM1YMR182C 636 nt3.1□□□□□ -1.91
TY1A-LR4P0C2I8 AI5_ALPHAQ0070 1893 nt3.09□□□□□ -1.91
TY1A-LR4P0C2I8 CDC27YBL084C 2277 nt3.09□□□□□ -1.91
TY1A-LR4P0C2I8 MIT1YEL007W 2001 nt3.09□□□□□ -1.91
TY1A-LR4P0C2I8 YML037CYML037C 1023 nt3.09□□□□□ -1.91
TY1A-LR4P0C2I8 YOR015WYOR015W 360 nt3.09□□□□□ -1.91
TY1A-LR4P0C2I8 NUP120YKL057C 3114 nt3.09□□□□□ -1.92
TY1A-LR4P0C2I8 UBP11YKR098C 2154 nt3.08□□□□□ -1.92
TY1A-LR4P0C2I8 FAP7YDL166C 594 nt3.08□□□□□ -1.92
TY1A-LR4P0C2I8 SSS1YDR086C 243 nt3.08□□□□□ -1.92
TY1A-LR4P0C2I8 YER039C-AYER039C-A 219 nt3.08□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 105 ms