Protein–RNA interactions for Protein: P0C2I6

TY1B-LR3, Transposon Ty1-LR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-LR3P0C2I6 WAR1YML076C 2835 nt0.49□□□□□ -2.33
TY1B-LR3P0C2I6 RIF2YLR453C 1188 nt0.49□□□□□ -2.33
TY1B-LR3P0C2I6 YNL179CYNL179C 438 nt0.49□□□□□ -2.33
TY1B-LR3P0C2I6 MUK1YPL070W 1839 nt0.49□□□□□ -2.33
TY1B-LR3P0C2I6 YCR015CYCR015C 954 nt0.48□□□□□ -2.33
TY1B-LR3P0C2I6 RGI1YER067W 486 nt0.48□□□□□ -2.33
TY1B-LR3P0C2I6 TAN1YGL232W 870 nt0.48□□□□□ -2.33
TY1B-LR3P0C2I6 DSE2YHR143W 978 nt0.48□□□□□ -2.33
TY1B-LR3P0C2I6 YLR290CYLR290C 834 nt0.48□□□□□ -2.33
TY1B-LR3P0C2I6 snR191snR191 274 nt0.48□□□□□ -2.33
TY1B-LR3P0C2I6 DGR2YKL121W 2559 nt0.48□□□□□ -2.33
TY1B-LR3P0C2I6 MUM3YOR298W 1440 nt0.48□□□□□ -2.33
TY1B-LR3P0C2I6 YCR102W-AYCR102W-A 198 nt0.47□□□□□ -2.33
TY1B-LR3P0C2I6 YFR056CYFR056C 369 nt0.47□□□□□ -2.33
TY1B-LR3P0C2I6 SPO12YHR152W 522 nt0.47□□□□□ -2.33
TY1B-LR3P0C2I6 RPL6BYLR448W 531 nt0.47□□□□□ -2.33
TY1B-LR3P0C2I6 YPR159C-AYPR159C-A 102 nt0.47□□□□□ -2.33
TY1B-LR3P0C2I6 YML002WYML002W 2214 nt0.47□□□□□ -2.33
TY1B-LR3P0C2I6 SPO77YLR341W 1434 nt0.47□□□□□ -2.33
TY1B-LR3P0C2I6 NCA2YPR155C 1851 nt0.47□□□□□ -2.33
TY1B-LR3P0C2I6 HIR3YJR140C 4947 nt0.47□□□□□ -2.33
TY1B-LR3P0C2I6 YNL010WYNL010W 726 nt0.47□□□□□ -2.33
TY1B-LR3P0C2I6 YGR250CYGR250C 2346 nt0.46□□□□□ -2.34
TY1B-LR3P0C2I6 EPT1YHR123W 1176 nt0.46□□□□□ -2.34
TY1B-LR3P0C2I6 SPP381YBR152W 876 nt0.46□□□□□ -2.34
TY1B-LR3P0C2I6 LSM7YNL147W 348 nt0.45□□□□□ -2.34
TY1B-LR3P0C2I6 NME1NME1 340 nt0.45□□□□□ -2.34
TY1B-LR3P0C2I6 PFK27YOL136C 1194 nt0.45□□□□□ -2.34
TY1B-LR3P0C2I6 UFE1YOR075W 1041 nt0.45□□□□□ -2.34
TY1B-LR3P0C2I6 ALK1YGL021W 2283 nt0.45□□□□□ -2.34
TY1B-LR3P0C2I6 MVP1YMR004W 1536 nt0.45□□□□□ -2.34
TY1B-LR3P0C2I6 RRG1YDR065W 1098 nt0.45□□□□□ -2.34
TY1B-LR3P0C2I6 YGL118CYGL118C 438 nt0.45□□□□□ -2.34
TY1B-LR3P0C2I6 YIP1YGR172C 747 nt0.45□□□□□ -2.34
TY1B-LR3P0C2I6 LTO1YNL260C 597 nt0.45□□□□□ -2.34
TY1B-LR3P0C2I6 ALG5YPL227C 1005 nt0.45□□□□□ -2.34
TY1B-LR3P0C2I6 YDR042CYDR042C 603 nt0.43□□□□□ -2.34
TY1B-LR3P0C2I6 DSE1YER124C 1722 nt0.42□□□□□ -2.34
TY1B-LR3P0C2I6 YGL138CYGL138C 1038 nt0.42□□□□□ -2.34
TY1B-LR3P0C2I6 FYV4YHR059W 393 nt0.42□□□□□ -2.34
TY1B-LR3P0C2I6 RPS10AYOR293W 318 nt0.42□□□□□ -2.34
TY1B-LR3P0C2I6 YDR210W-AYDR210W-A 1317 nt0.42□□□□□ -2.34
TY1B-LR3P0C2I6 YOR343W-AYOR343W-A 1317 nt0.42□□□□□ -2.34
TY1B-LR3P0C2I6 SVP26YHR181W 687 nt0.42□□□□□ -2.34
TY1B-LR3P0C2I6 CMC2YBL059C-A 330 nt0.42□□□□□ -2.34
TY1B-LR3P0C2I6 CYB5YNL111C 363 nt0.42□□□□□ -2.34
TY1B-LR3P0C2I6 YGR114CYGR114C 390 nt0.41□□□□□ -2.34
TY1B-LR3P0C2I6 CDC5YMR001C 2118 nt0.41□□□□□ -2.34
TY1B-LR3P0C2I6 YLL007CYLL007C 1998 nt0.4□□□□□ -2.34
TY1B-LR3P0C2I6 YEL009C-AYEL009C-A 408 nt0.4□□□□□ -2.35
TY1B-LR3P0C2I6 YER088C-AYER088C-A 324 nt0.4□□□□□ -2.35
TY1B-LR3P0C2I6 YHL009W-AYHL009W-A 1242 nt0.4□□□□□ -2.35
TY1B-LR3P0C2I6 RPL38YLR325C 237 nt0.4□□□□□ -2.35
TY1B-LR3P0C2I6 LYS14YDR034C 2373 nt0.4□□□□□ -2.35
TY1B-LR3P0C2I6 YMR178WYMR178W 825 nt0.4□□□□□ -2.35
TY1B-LR3P0C2I6 MER1YNL210W 813 nt0.4□□□□□ -2.35
TY1B-LR3P0C2I6 NUT1YGL151W 3399 nt0.39□□□□□ -2.35
TY1B-LR3P0C2I6 YLL054CYLL054C 2532 nt0.38□□□□□ -2.35
TY1B-LR3P0C2I6 SRB4YER022W 2064 nt0.38□□□□□ -2.35
TY1B-LR3P0C2I6 UPF3YGR072W 1164 nt0.38□□□□□ -2.35
TY1B-LR3P0C2I6 PRS3YHL011C 963 nt0.38□□□□□ -2.35
TY1B-LR3P0C2I6 HYR1YIR037W 492 nt0.38□□□□□ -2.35
TY1B-LR3P0C2I6 FIG1YBR040W 897 nt0.38□□□□□ -2.35
TY1B-LR3P0C2I6 snR45snR45 172 nt0.38□□□□□ -2.35
TY1B-LR3P0C2I6 YDR286CYDR286C 345 nt0.37□□□□□ -2.35
TY1B-LR3P0C2I6 SMD1YGR074W 441 nt0.37□□□□□ -2.35
TY1B-LR3P0C2I6 ABM1YJR108W 372 nt0.37□□□□□ -2.35
TY1B-LR3P0C2I6 ADF1YCL058W-A 342 nt0.37□□□□□ -2.35
TY1B-LR3P0C2I6 SNA4YDL123W 423 nt0.37□□□□□ -2.35
TY1B-LR3P0C2I6 EDC1YGL222C 528 nt0.37□□□□□ -2.35
TY1B-LR3P0C2I6 RAM2YKL019W 951 nt0.37□□□□□ -2.35
TY1B-LR3P0C2I6 MGR1YCL044C 1254 nt0.37□□□□□ -2.35
TY1B-LR3P0C2I6 YBL094CYBL094C 333 nt0.36□□□□□ -2.35
TY1B-LR3P0C2I6 MRPL40YPL173W 894 nt0.36□□□□□ -2.35
TY1B-LR3P0C2I6 YGL039WYGL039W 1047 nt0.35□□□□□ -2.35
TY1B-LR3P0C2I6 YDR248CYDR248C 582 nt0.34□□□□□ -2.35
TY1B-LR3P0C2I6 PRM8YGL053W 714 nt0.34□□□□□ -2.35
TY1B-LR3P0C2I6 BNS1YGR230W 414 nt0.34□□□□□ -2.35
TY1B-LR3P0C2I6 YJL026C-AYJL026C-A 222 nt0.34□□□□□ -2.35
TY1B-LR3P0C2I6 SEC22YLR268W 645 nt0.34□□□□□ -2.35
TY1B-LR3P0C2I6 ARL3YPL051W 597 nt0.34□□□□□ -2.35
TY1B-LR3P0C2I6 NUP120YKL057C 3114 nt0.34□□□□□ -2.35
TY1B-LR3P0C2I6 YDR261W-AYDR261W-A 1317 nt0.34□□□□□ -2.36
TY1B-LR3P0C2I6 snR68snR68 136 nt0.34□□□□□ -2.36
TY1B-LR3P0C2I6 SLU7YDR088C 1149 nt0.34□□□□□ -2.36
TY1B-LR3P0C2I6 YIM2YMR151W 438 nt0.34□□□□□ -2.36
TY1B-LR3P0C2I6 URB1YKL014C 5295 nt0.34□□□□□ -2.36
TY1B-LR3P0C2I6 SMB1YER029C 591 nt0.33□□□□□ -2.36
TY1B-LR3P0C2I6 RPL9AYGL147C 576 nt0.33□□□□□ -2.36
TY1B-LR3P0C2I6 IRC14YOR135C 342 nt0.33□□□□□ -2.36
TY1B-LR3P0C2I6 UAF30YOR295W 687 nt0.33□□□□□ -2.36
TY1B-LR3P0C2I6 SMY1YKL079W 1971 nt0.32□□□□□ -2.36
TY1B-LR3P0C2I6 HOP2YGL033W 657 nt0.32□□□□□ -2.36
TY1B-LR3P0C2I6 snR35snR35 204 nt0.32□□□□□ -2.36
TY1B-LR3P0C2I6 ICS2YBR157C 768 nt0.32□□□□□ -2.36
TY1B-LR3P0C2I6 STB6YKL072W 2301 nt0.32□□□□□ -2.36
TY1B-LR3P0C2I6 NUP188YML103C 4968 nt0.32□□□□□ -2.36
TY1B-LR3P0C2I6 AIM9YER080W 1884 nt0.32□□□□□ -2.36
TY1B-LR3P0C2I6 PCL2YDL127W 927 nt0.32□□□□□ -2.36
TY1B-LR3P0C2I6 ECM12YHR021W-A 456 nt0.32□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 85 ms