Protein–RNA interactions for Protein: P0C2I5

TY1B-LR2, Transposon Ty1-LR2 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-LR2P0C2I5 YER091C-AYER091C-A 222 nt0.51□□□□□ -2.33
TY1B-LR2P0C2I5 YBR063CYBR063C 1215 nt0.51□□□□□ -2.33
TY1B-LR2P0C2I5 snR191snR191 274 nt0.51□□□□□ -2.33
TY1B-LR2P0C2I5 RPL6BYLR448W 531 nt0.5□□□□□ -2.33
TY1B-LR2P0C2I5 LTO1YNL260C 597 nt0.5□□□□□ -2.33
TY1B-LR2P0C2I5 PFK27YOL136C 1194 nt0.5□□□□□ -2.33
TY1B-LR2P0C2I5 YCR015CYCR015C 954 nt0.5□□□□□ -2.33
TY1B-LR2P0C2I5 YFR056CYFR056C 369 nt0.5□□□□□ -2.33
TY1B-LR2P0C2I5 WAR1YML076C 2835 nt0.49□□□□□ -2.33
TY1B-LR2P0C2I5 YCR102W-AYCR102W-A 198 nt0.49□□□□□ -2.33
TY1B-LR2P0C2I5 EPT1YHR123W 1176 nt0.49□□□□□ -2.33
TY1B-LR2P0C2I5 SPO12YHR152W 522 nt0.49□□□□□ -2.33
TY1B-LR2P0C2I5 RIF2YLR453C 1188 nt0.49□□□□□ -2.33
TY1B-LR2P0C2I5 YNL179CYNL179C 438 nt0.49□□□□□ -2.33
TY1B-LR2P0C2I5 DGR2YKL121W 2559 nt0.49□□□□□ -2.33
TY1B-LR2P0C2I5 SPO77YLR341W 1434 nt0.48□□□□□ -2.33
TY1B-LR2P0C2I5 RRG1YDR065W 1098 nt0.48□□□□□ -2.33
TY1B-LR2P0C2I5 RGI1YER067W 486 nt0.48□□□□□ -2.33
TY1B-LR2P0C2I5 NME1NME1 340 nt0.48□□□□□ -2.33
TY1B-LR2P0C2I5 HIR3YJR140C 4947 nt0.48□□□□□ -2.33
TY1B-LR2P0C2I5 RPL40AYIL148W 387 nt0.47□□□□□ -2.33
TY1B-LR2P0C2I5 YPR159C-AYPR159C-A 102 nt0.47□□□□□ -2.33
TY1B-LR2P0C2I5 YML002WYML002W 2214 nt0.47□□□□□ -2.33
TY1B-LR2P0C2I5 YGL118CYGL118C 438 nt0.47□□□□□ -2.33
TY1B-LR2P0C2I5 YNL010WYNL010W 726 nt0.47□□□□□ -2.33
TY1B-LR2P0C2I5 YGR250CYGR250C 2346 nt0.46□□□□□ -2.34
TY1B-LR2P0C2I5 ALK1YGL021W 2283 nt0.46□□□□□ -2.34
TY1B-LR2P0C2I5 MUK1YPL070W 1839 nt0.46□□□□□ -2.34
TY1B-LR2P0C2I5 YGL138CYGL138C 1038 nt0.46□□□□□ -2.34
TY1B-LR2P0C2I5 LSM7YNL147W 348 nt0.46□□□□□ -2.34
TY1B-LR2P0C2I5 RPS10AYOR293W 318 nt0.46□□□□□ -2.34
TY1B-LR2P0C2I5 SPP381YBR152W 876 nt0.46□□□□□ -2.34
TY1B-LR2P0C2I5 MVP1YMR004W 1536 nt0.46□□□□□ -2.34
TY1B-LR2P0C2I5 YGR114CYGR114C 390 nt0.45□□□□□ -2.34
TY1B-LR2P0C2I5 FYV4YHR059W 393 nt0.45□□□□□ -2.34
TY1B-LR2P0C2I5 UFE1YOR075W 1041 nt0.45□□□□□ -2.34
TY1B-LR2P0C2I5 DSE1YER124C 1722 nt0.45□□□□□ -2.34
TY1B-LR2P0C2I5 YDR042CYDR042C 603 nt0.45□□□□□ -2.34
TY1B-LR2P0C2I5 YIP1YGR172C 747 nt0.45□□□□□ -2.34
TY1B-LR2P0C2I5 AZF1YOR113W 2745 nt0.44□□□□□ -2.34
TY1B-LR2P0C2I5 CDC5YMR001C 2118 nt0.44□□□□□ -2.34
TY1B-LR2P0C2I5 CYB5YNL111C 363 nt0.43□□□□□ -2.34
TY1B-LR2P0C2I5 UPF3YGR072W 1164 nt0.42□□□□□ -2.34
TY1B-LR2P0C2I5 CMC2YBL059C-A 330 nt0.42□□□□□ -2.34
TY1B-LR2P0C2I5 FIG1YBR040W 897 nt0.42□□□□□ -2.34
TY1B-LR2P0C2I5 COX1Q0045 1605 nt0.42□□□□□ -2.34
TY1B-LR2P0C2I5 SRB4YER022W 2064 nt0.42□□□□□ -2.34
TY1B-LR2P0C2I5 YEL009C-AYEL009C-A 408 nt0.42□□□□□ -2.34
TY1B-LR2P0C2I5 YER088C-AYER088C-A 324 nt0.42□□□□□ -2.34
TY1B-LR2P0C2I5 YHL009W-AYHL009W-A 1242 nt0.42□□□□□ -2.34
TY1B-LR2P0C2I5 SVP26YHR181W 687 nt0.42□□□□□ -2.34
TY1B-LR2P0C2I5 MER1YNL210W 813 nt0.42□□□□□ -2.34
TY1B-LR2P0C2I5 YDR210W-AYDR210W-A 1317 nt0.41□□□□□ -2.34
TY1B-LR2P0C2I5 YOR343W-AYOR343W-A 1317 nt0.41□□□□□ -2.34
TY1B-LR2P0C2I5 NCA2YPR155C 1851 nt0.41□□□□□ -2.34
TY1B-LR2P0C2I5 YLL007CYLL007C 1998 nt0.4□□□□□ -2.34
TY1B-LR2P0C2I5 SMD1YGR074W 441 nt0.4□□□□□ -2.35
TY1B-LR2P0C2I5 RPL38YLR325C 237 nt0.4□□□□□ -2.35
TY1B-LR2P0C2I5 LYS14YDR034C 2373 nt0.4□□□□□ -2.35
TY1B-LR2P0C2I5 YDR286CYDR286C 345 nt0.4□□□□□ -2.35
TY1B-LR2P0C2I5 YMR178WYMR178W 825 nt0.4□□□□□ -2.35
TY1B-LR2P0C2I5 ADF1YCL058W-A 342 nt0.4□□□□□ -2.35
TY1B-LR2P0C2I5 BNS1YGR230W 414 nt0.39□□□□□ -2.35
TY1B-LR2P0C2I5 RAM2YKL019W 951 nt0.39□□□□□ -2.35
TY1B-LR2P0C2I5 MGR1YCL044C 1254 nt0.39□□□□□ -2.35
TY1B-LR2P0C2I5 YLL054CYLL054C 2532 nt0.38□□□□□ -2.35
TY1B-LR2P0C2I5 snR68snR68 136 nt0.38□□□□□ -2.35
TY1B-LR2P0C2I5 PRS3YHL011C 963 nt0.38□□□□□ -2.35
TY1B-LR2P0C2I5 ARL3YPL051W 597 nt0.38□□□□□ -2.35
TY1B-LR2P0C2I5 snR45snR45 172 nt0.38□□□□□ -2.35
TY1B-LR2P0C2I5 NUT1YGL151W 3399 nt0.38□□□□□ -2.35
TY1B-LR2P0C2I5 HYR1YIR037W 492 nt0.37□□□□□ -2.35
TY1B-LR2P0C2I5 ABM1YJR108W 372 nt0.37□□□□□ -2.35
TY1B-LR2P0C2I5 SNA4YDL123W 423 nt0.37□□□□□ -2.35
TY1B-LR2P0C2I5 YGL039WYGL039W 1047 nt0.37□□□□□ -2.35
TY1B-LR2P0C2I5 EDC1YGL222C 528 nt0.37□□□□□ -2.35
TY1B-LR2P0C2I5 NUP120YKL057C 3114 nt0.37□□□□□ -2.35
TY1B-LR2P0C2I5 MRPL40YPL173W 894 nt0.36□□□□□ -2.35
TY1B-LR2P0C2I5 snR35snR35 204 nt0.36□□□□□ -2.35
TY1B-LR2P0C2I5 PRM8YGL053W 714 nt0.35□□□□□ -2.35
TY1B-LR2P0C2I5 YIL012WYIL012W 342 nt0.35□□□□□ -2.35
TY1B-LR2P0C2I5 CIN2YPL241C 807 nt0.35□□□□□ -2.35
TY1B-LR2P0C2I5 YDR248CYDR248C 582 nt0.34□□□□□ -2.35
TY1B-LR2P0C2I5 SMB1YER029C 591 nt0.34□□□□□ -2.35
TY1B-LR2P0C2I5 YJL026C-AYJL026C-A 222 nt0.34□□□□□ -2.35
TY1B-LR2P0C2I5 SEC22YLR268W 645 nt0.34□□□□□ -2.35
TY1B-LR2P0C2I5 YIM2YMR151W 438 nt0.34□□□□□ -2.35
TY1B-LR2P0C2I5 PCL2YDL127W 927 nt0.34□□□□□ -2.36
TY1B-LR2P0C2I5 YFR054CYFR054C 579 nt0.34□□□□□ -2.36
TY1B-LR2P0C2I5 YBL094CYBL094C 333 nt0.34□□□□□ -2.36
TY1B-LR2P0C2I5 RPB5YBR154C 648 nt0.34□□□□□ -2.36
TY1B-LR2P0C2I5 URB1YKL014C 5295 nt0.34□□□□□ -2.36
TY1B-LR2P0C2I5 HOP2YGL033W 657 nt0.33□□□□□ -2.36
TY1B-LR2P0C2I5 RPL9AYGL147C 576 nt0.33□□□□□ -2.36
TY1B-LR2P0C2I5 IRC14YOR135C 342 nt0.33□□□□□ -2.36
TY1B-LR2P0C2I5 NUP188YML103C 4968 nt0.33□□□□□ -2.36
TY1B-LR2P0C2I5 AIM9YER080W 1884 nt0.33□□□□□ -2.36
TY1B-LR2P0C2I5 STB6YKL072W 2301 nt0.33□□□□□ -2.36
TY1B-LR2P0C2I5 PSO2YMR137C 1986 nt0.32□□□□□ -2.36
TY1B-LR2P0C2I5 SLU7YDR088C 1149 nt0.32□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 17.3 ms