Protein–RNA interactions for Protein: P0C0X0

RPS28B, 40S ribosomal protein S28-B, yeastyeast

Known RBP Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS28BP0C0X0 LAG1YHL003C 1236 nt0.81□□□□□ -2.28
RPS28BP0C0X0 YJL086CYJL086C 369 nt0.81□□□□□ -2.28
RPS28BP0C0X0 YKL183C-AYKL183C-A 213 nt0.81□□□□□ -2.28
RPS28BP0C0X0 YLR031WYLR031W 561 nt0.81□□□□□ -2.28
RPS28BP0C0X0 TYE7YOR344C 876 nt0.81□□□□□ -2.28
RPS28BP0C0X0 snR44snR44 211 nt0.81□□□□□ -2.28
RPS28BP0C0X0 OSH6YKR003W 1347 nt0.81□□□□□ -2.28
RPS28BP0C0X0 SMC1YFL008W 3678 nt0.8□□□□□ -2.28
RPS28BP0C0X0 PRP16YKR086W 3216 nt0.8□□□□□ -2.28
RPS28BP0C0X0 MAK10YEL053C 2202 nt0.8□□□□□ -2.28
RPS28BP0C0X0 KAR9YPL269W 1935 nt0.8□□□□□ -2.28
RPS28BP0C0X0 YDL041WYDL041W 354 nt0.8□□□□□ -2.28
RPS28BP0C0X0 ATC1YDR184C 885 nt0.8□□□□□ -2.28
RPS28BP0C0X0 YFL012W-AYFL012W-A 375 nt0.8□□□□□ -2.28
RPS28BP0C0X0 RPL29YFR032C-A 180 nt0.8□□□□□ -2.28
RPS28BP0C0X0 YGL217CYGL217C 342 nt0.8□□□□□ -2.28
RPS28BP0C0X0 BTN2YGR142W 1233 nt0.8□□□□□ -2.28
RPS28BP0C0X0 SGN1YIR001C 753 nt0.8□□□□□ -2.28
RPS28BP0C0X0 VPS63YLR261C 327 nt0.8□□□□□ -2.28
RPS28BP0C0X0 RSM18YER050C 417 nt0.79□□□□□ -2.28
RPS28BP0C0X0 YGR265WYGR265W 411 nt0.79□□□□□ -2.28
RPS28BP0C0X0 PEP8YJL053W 1140 nt0.79□□□□□ -2.28
RPS28BP0C0X0 ALB1YJL122W 528 nt0.79□□□□□ -2.28
RPS28BP0C0X0 URA10YMR271C 684 nt0.79□□□□□ -2.28
RPS28BP0C0X0 OST2YOR103C 393 nt0.79□□□□□ -2.28
RPS28BP0C0X0 snR14snR14 160 nt0.79□□□□□ -2.28
RPS28BP0C0X0 NUP145YGL092W 3954 nt0.79□□□□□ -2.28
RPS28BP0C0X0 SAS3YBL052C 2496 nt0.79□□□□□ -2.28
RPS28BP0C0X0 CDC39YCR093W 6327 nt0.79□□□□□ -2.28
RPS28BP0C0X0 RSM28YDR494W 1086 nt0.78□□□□□ -2.28
RPS28BP0C0X0 SVP26YHR181W 687 nt0.78□□□□□ -2.28
RPS28BP0C0X0 ICY1YMR195W 384 nt0.78□□□□□ -2.28
RPS28BP0C0X0 YBL073WYBL073W 312 nt0.78□□□□□ -2.28
RPS28BP0C0X0 BRX1YOL077C 876 nt0.78□□□□□ -2.28
RPS28BP0C0X0 IRC23YOR044W 474 nt0.78□□□□□ -2.28
RPS28BP0C0X0 YBR287WYBR287W 1284 nt0.78□□□□□ -2.28
RPS28BP0C0X0 YLL054CYLL054C 2532 nt0.77□□□□□ -2.29
RPS28BP0C0X0 CAJ1YER048C 1176 nt0.77□□□□□ -2.29
RPS28BP0C0X0 YIR020CYIR020C 303 nt0.77□□□□□ -2.29
RPS28BP0C0X0 CSI1YMR025W 888 nt0.77□□□□□ -2.29
RPS28BP0C0X0 YGR130CYGR130C 2451 nt0.77□□□□□ -2.29
RPS28BP0C0X0 PEP3YLR148W 2757 nt0.77□□□□□ -2.29
RPS28BP0C0X0 BUD3YCL014W 4911 nt0.76□□□□□ -2.29
RPS28BP0C0X0 YDR261W-AYDR261W-A 1317 nt0.76□□□□□ -2.29
RPS28BP0C0X0 YHR032W-AYHR032W-A 180 nt0.76□□□□□ -2.29
RPS28BP0C0X0 RCN1YKL159C 636 nt0.76□□□□□ -2.29
RPS28BP0C0X0 YMR105W-AYMR105W-A 195 nt0.76□□□□□ -2.29
RPS28BP0C0X0 YBR224WYBR224W 516 nt0.76□□□□□ -2.29
RPS28BP0C0X0 NUT1YGL151W 3399 nt0.76□□□□□ -2.29
RPS28BP0C0X0 APL3YBL037W 3078 nt0.75□□□□□ -2.29
RPS28BP0C0X0 RAD6YGL058W 519 nt0.75□□□□□ -2.29
RPS28BP0C0X0 YGR107WYGR107W 450 nt0.75□□□□□ -2.29
RPS28BP0C0X0 FMP23YBR047W 528 nt0.75□□□□□ -2.29
RPS28BP0C0X0 SLX4YLR135W 2247 nt0.74□□□□□ -2.29
RPS28BP0C0X0 SEC5YDR166C 2916 nt0.74□□□□□ -2.29
RPS28BP0C0X0 DTD1YDL219W 453 nt0.74□□□□□ -2.29
RPS28BP0C0X0 RUB1YDR139C 234 nt0.74□□□□□ -2.29
RPS28BP0C0X0 VMA7YGR020C 357 nt0.74□□□□□ -2.29
RPS28BP0C0X0 ERG29YMR134W 714 nt0.74□□□□□ -2.29
RPS28BP0C0X0 YMR158C-AYMR158C-A 138 nt0.74□□□□□ -2.29
RPS28BP0C0X0 SGD1YLR336C 2700 nt0.73□□□□□ -2.29
RPS28BP0C0X0 YDL073WYDL073W 2955 nt0.73□□□□□ -2.29
RPS28BP0C0X0 YDR194W-AYDR194W-A 153 nt0.73□□□□□ -2.29
RPS28BP0C0X0 IES5YER092W 378 nt0.73□□□□□ -2.29
RPS28BP0C0X0 YGL042CYGL042C 306 nt0.73□□□□□ -2.29
RPS28BP0C0X0 tL(UAG)JtL(UAG)J 82 nt0.73□□□□□ -2.29
RPS28BP0C0X0 tL(UAG)L1tL(UAG)L1 82 nt0.73□□□□□ -2.29
RPS28BP0C0X0 tL(UAG)L2tL(UAG)L2 82 nt0.73□□□□□ -2.29
RPS28BP0C0X0 YNL296WYNL296W 315 nt0.73□□□□□ -2.29
RPS28BP0C0X0 YOR392WYOR392W 444 nt0.73□□□□□ -2.29
RPS28BP0C0X0 SPT21YMR179W 2277 nt0.73□□□□□ -2.29
RPS28BP0C0X0 NUP157YER105C 4176 nt0.73□□□□□ -2.29
RPS28BP0C0X0 SLS1YLR139C 1932 nt0.72□□□□□ -2.29
RPS28BP0C0X0 PRM8YGL053W 714 nt0.72□□□□□ -2.29
RPS28BP0C0X0 RPS30AYLR287C-A 192 nt0.72□□□□□ -2.29
RPS28BP0C0X0 ATP15YPL271W 189 nt0.72□□□□□ -2.29
RPS28BP0C0X0 SHE4YOR035C 2370 nt0.72□□□□□ -2.29
RPS28BP0C0X0 SGO1YOR073W 1773 nt0.72□□□□□ -2.29
RPS28BP0C0X0 DPB11YJL090C 2295 nt0.72□□□□□ -2.29
RPS28BP0C0X0 GAL83YER027C 1254 nt0.71□□□□□ -2.3
RPS28BP0C0X0 YLR302CYLR302C 363 nt0.71□□□□□ -2.3
RPS28BP0C0X0 COA6YMR244C-A 315 nt0.71□□□□□ -2.3
RPS28BP0C0X0 DIA1YMR316W 1011 nt0.71□□□□□ -2.3
RPS28BP0C0X0 RPL9BYNL067W 576 nt0.71□□□□□ -2.3
RPS28BP0C0X0 YPR117WYPR117W 7470 nt0.71□□□□□ -2.3
RPS28BP0C0X0 PIP2YOR363C 2991 nt0.71□□□□□ -2.3
RPS28BP0C0X0 YAP3YHL009C 993 nt0.7□□□□□ -2.3
RPS28BP0C0X0 NBL1YHR199C-A 222 nt0.7□□□□□ -2.3
RPS28BP0C0X0 SEC22YLR268W 645 nt0.7□□□□□ -2.3
RPS28BP0C0X0 SWS2YNL081C 432 nt0.7□□□□□ -2.3
RPS28BP0C0X0 UFE1YOR075W 1041 nt0.7□□□□□ -2.3
RPS28BP0C0X0 RPL33BYOR234C 324 nt0.7□□□□□ -2.3
RPS28BP0C0X0 RNR4YGR180C 1038 nt0.69□□□□□ -2.3
RPS28BP0C0X0 GPX1YKL026C 504 nt0.69□□□□□ -2.3
RPS28BP0C0X0 SUS1YBR111W-A 291 nt0.69□□□□□ -2.3
RPS28BP0C0X0 YJR098CYJR098C 1971 nt0.68□□□□□ -2.3
RPS28BP0C0X0 CDC24YAL041W 2565 nt0.68□□□□□ -2.3
RPS28BP0C0X0 DAD1YDR016C 285 nt0.68□□□□□ -2.3
RPS28BP0C0X0 VPS74YDR372C 1038 nt0.68□□□□□ -2.3
RPS28BP0C0X0 NBP1YLR457C 960 nt0.68□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 27.4 ms