Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 IML1YJR138W 4755 nt1.07□□□□□ -2.24
RFU1Q08003 UBC9YDL064W 474 nt1.07□□□□□ -2.24
RFU1Q08003 RPN9YDR427W 1182 nt1.07□□□□□ -2.24
RFU1Q08003 YKL115CYKL115C 393 nt1.07□□□□□ -2.24
RFU1Q08003 PEX27YOR193W 1131 nt1.07□□□□□ -2.24
RFU1Q08003 RPL33BYOR234C 324 nt1.07□□□□□ -2.24
RFU1Q08003 snR34snR34 203 nt1.07□□□□□ -2.24
RFU1Q08003 ASM4YDL088C 1587 nt1.07□□□□□ -2.24
RFU1Q08003 YDR042CYDR042C 603 nt1.06□□□□□ -2.24
RFU1Q08003 LSM4YER112W 564 nt1.06□□□□□ -2.24
RFU1Q08003 CMC2YBL059C-A 330 nt1.06□□□□□ -2.24
RFU1Q08003 RPB11YOL005C 363 nt1.06□□□□□ -2.24
RFU1Q08003 YBR090CYBR090C 369 nt1.06□□□□□ -2.24
RFU1Q08003 BFA1YJR053W 1725 nt1.06□□□□□ -2.24
RFU1Q08003 HIR3YJR140C 4947 nt1.06□□□□□ -2.24
RFU1Q08003 VMR1YHL035C 4779 nt1.05□□□□□ -2.24
RFU1Q08003 IRR1YIL026C 3453 nt1.05□□□□□ -2.24
RFU1Q08003 SDL1YIL167W 633 nt1.05□□□□□ -2.24
RFU1Q08003 RAM2YKL019W 951 nt1.05□□□□□ -2.24
RFU1Q08003 CYB5YNL111C 363 nt1.05□□□□□ -2.24
RFU1Q08003 YNR021WYNR021W 1215 nt1.05□□□□□ -2.24
RFU1Q08003 NSL1YPL233W 651 nt1.05□□□□□ -2.24
RFU1Q08003 SPO22YIL073C 2928 nt1.05□□□□□ -2.24
RFU1Q08003 YDL025W-AYDL025W-A 105 nt1.04□□□□□ -2.24
RFU1Q08003 YDR262WYDR262W 819 nt1.04□□□□□ -2.24
RFU1Q08003 YDR461C-AYDR461C-A 243 nt1.04□□□□□ -2.24
RFU1Q08003 FAR7YFR008W 666 nt1.04□□□□□ -2.24
RFU1Q08003 YET1YKL065C 621 nt1.04□□□□□ -2.24
RFU1Q08003 LSM7YNL147W 348 nt1.04□□□□□ -2.24
RFU1Q08003 YOL085W-AYOL085W-A 213 nt1.04□□□□□ -2.24
RFU1Q08003 PEX34YCL056C 435 nt1.04□□□□□ -2.24
RFU1Q08003 SPT7YBR081C 3999 nt1.04□□□□□ -2.24
RFU1Q08003 YGR130CYGR130C 2451 nt1.03□□□□□ -2.24
RFU1Q08003 MIC19YFR011C 513 nt1.03□□□□□ -2.24
RFU1Q08003 SWM2YNR004W 441 nt1.03□□□□□ -2.24
RFU1Q08003 EGD1YPL037C 474 nt1.03□□□□□ -2.24
RFU1Q08003 YBR062CYBR062C 543 nt1.03□□□□□ -2.24
RFU1Q08003 VID24YBR105C 1089 nt1.03□□□□□ -2.24
RFU1Q08003 TRM732YMR259C 4263 nt1.03□□□□□ -2.24
RFU1Q08003 VAM6YDL077C 3150 nt1.02□□□□□ -2.25
RFU1Q08003 YEL010WYEL010W 351 nt1.02□□□□□ -2.25
RFU1Q08003 YJL119CYJL119C 324 nt1.02□□□□□ -2.25
RFU1Q08003 ESA1YOR244W 1338 nt1.02□□□□□ -2.25
RFU1Q08003 YOR394C-AYOR394C-A 168 nt1.02□□□□□ -2.25
RFU1Q08003 MNL2YLR057W 2550 nt1.02□□□□□ -2.25
RFU1Q08003 PPE1YHR075C 1203 nt1.01□□□□□ -2.25
RFU1Q08003 tV(UAC)BtV(UAC)B 74 nt1.01□□□□□ -2.25
RFU1Q08003 tV(UAC)DtV(UAC)D 74 nt1.01□□□□□ -2.25
RFU1Q08003 RPI1YIL119C 1224 nt1.01□□□□□ -2.25
RFU1Q08003 TAP42YMR028W 1101 nt1.01□□□□□ -2.25
RFU1Q08003 PKR1YMR123W 369 nt1.01□□□□□ -2.25
RFU1Q08003 YOL118CYOL118C 309 nt1.01□□□□□ -2.25
RFU1Q08003 RPN8YOR261C 1017 nt1.01□□□□□ -2.25
RFU1Q08003 TRS20YBR254C 528 nt1.01□□□□□ -2.25
RFU1Q08003 SCC2YDR180W 4482 nt1.01□□□□□ -2.25
RFU1Q08003 KAP122YGL016W 3246 nt1□□□□□ -2.25
RFU1Q08003 RPS26BYER131W 360 nt1□□□□□ -2.25
RFU1Q08003 SMD1YGR074W 441 nt1□□□□□ -2.25
RFU1Q08003 PRS3YHL011C 963 nt1□□□□□ -2.25
RFU1Q08003 FSH1YHR049W 732 nt1□□□□□ -2.25
RFU1Q08003 CIC1YHR052W 1131 nt1□□□□□ -2.25
RFU1Q08003 RPL34BYIL052C 366 nt1□□□□□ -2.25
RFU1Q08003 HYR1YIR037W 492 nt1□□□□□ -2.25
RFU1Q08003 RFA3YJL173C 369 nt1□□□□□ -2.25
RFU1Q08003 YPR146CYPR146C 330 nt1□□□□□ -2.25
RFU1Q08003 ROM2YLR371W 4071 nt0.99□□□□□ -2.25
RFU1Q08003 SIP4YJL089W 2490 nt0.99□□□□□ -2.25
RFU1Q08003 MTC7YEL033W 420 nt0.99□□□□□ -2.25
RFU1Q08003 MEI4YER044C-A 1227 nt0.99□□□□□ -2.25
RFU1Q08003 COX6YHR051W 447 nt0.99□□□□□ -2.25
RFU1Q08003 HSK3YKL138C-A 210 nt0.99□□□□□ -2.25
RFU1Q08003 GSP1YLR293C 660 nt0.99□□□□□ -2.25
RFU1Q08003 COX8YLR395C 237 nt0.99□□□□□ -2.25
RFU1Q08003 YML003WYML003W 873 nt0.99□□□□□ -2.25
RFU1Q08003 YNL114CYNL114C 372 nt0.99□□□□□ -2.25
RFU1Q08003 PET20YPL159C 762 nt0.99□□□□□ -2.25
RFU1Q08003 CUR1YPR158W 759 nt0.99□□□□□ -2.25
RFU1Q08003 MUK1YPL070W 1839 nt0.99□□□□□ -2.25
RFU1Q08003 YLR149CYLR149C 2193 nt0.98□□□□□ -2.25
RFU1Q08003 CLU1YMR012W 3834 nt0.98□□□□□ -2.25
RFU1Q08003 SPT14YPL175W 1359 nt0.98□□□□□ -2.25
RFU1Q08003 YDR169C-AYDR169C-A 150 nt0.98□□□□□ -2.25
RFU1Q08003 YDR336WYDR336W 945 nt0.98□□□□□ -2.25
RFU1Q08003 PRE4YFR050C 801 nt0.98□□□□□ -2.25
RFU1Q08003 YIP1YGR172C 747 nt0.98□□□□□ -2.25
RFU1Q08003 BUD19YJL188C 309 nt0.98□□□□□ -2.25
RFU1Q08003 SMD2YLR275W 333 nt0.98□□□□□ -2.25
RFU1Q08003 YMR173W-AYMR173W-A 1185 nt0.98□□□□□ -2.25
RFU1Q08003 SEF1YBL066C 3447 nt0.98□□□□□ -2.25
RFU1Q08003 APM3YBR288C 1452 nt0.98□□□□□ -2.25
RFU1Q08003 YNL284C-BYNL284C-B 5268 nt0.98□□□□□ -2.25
RFU1Q08003 ALK1YGL021W 2283 nt0.98□□□□□ -2.25
RFU1Q08003 AZF1YOR113W 2745 nt0.97□□□□□ -2.25
RFU1Q08003 RRI1YDL216C 1323 nt0.97□□□□□ -2.25
RFU1Q08003 YOL150CYOL150C 312 nt0.97□□□□□ -2.25
RFU1Q08003 IRC13YOR235W 315 nt0.97□□□□□ -2.25
RFU1Q08003 RRP15YPR143W 753 nt0.97□□□□□ -2.25
RFU1Q08003 ZRG8YER033C 3231 nt0.97□□□□□ -2.25
RFU1Q08003 RIC1YLR039C 3171 nt0.97□□□□□ -2.25
RFU1Q08003 MDS3YGL197W 4464 nt0.96□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 92.4 ms