Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 TFB1YDR311W 1929 nt3.09□□□□□ -1.91
SSL2Q00578 NET1YJL076W 3570 nt3.09□□□□□ -1.91
SSL2Q00578 BIT61YJL058C 1632 nt3.09□□□□□ -1.91
SSL2Q00578 FLO11YIR019C 4104 nt3.09□□□□□ -1.91
SSL2Q00578 RPL23BYER117W 414 nt3.09□□□□□ -1.91
SSL2Q00578 URM1YIL008W 300 nt3.09□□□□□ -1.91
SSL2Q00578 YKL111CYKL111C 336 nt3.09□□□□□ -1.91
SSL2Q00578 MET6YER091C 2304 nt3.09□□□□□ -1.92
SSL2Q00578 YBP1YBR216C 2025 nt3.09□□□□□ -1.92
SSL2Q00578 TAF2YCR042C 4224 nt3.08□□□□□ -1.92
SSL2Q00578 YSW1YBR148W 1830 nt3.08□□□□□ -1.92
SSL2Q00578 HPA3YEL066W 540 nt3.08□□□□□ -1.92
SSL2Q00578 YFL063WYFL063W 456 nt3.08□□□□□ -1.92
SSL2Q00578 PNC1YGL037C 651 nt3.08□□□□□ -1.92
SSL2Q00578 YHR007C-AYHR007C-A 216 nt3.08□□□□□ -1.92
SSL2Q00578 RPS22BYLR367W 393 nt3.08□□□□□ -1.92
SSL2Q00578 RPL33AYPL143W 324 nt3.08□□□□□ -1.92
SSL2Q00578 BNA4YBL098W 1383 nt3.08□□□□□ -1.92
SSL2Q00578 STT4YLR305C 5703 nt3.08□□□□□ -1.92
SSL2Q00578 YGL007C-AYGL007C-A 87 nt3.07□□□□□ -1.92
SSL2Q00578 YIL174WYIL174W 228 nt3.07□□□□□ -1.92
SSL2Q00578 YJL222W-AYJL222W-A 228 nt3.07□□□□□ -1.92
SSL2Q00578 FCF2YLR051C 654 nt3.07□□□□□ -1.92
SSL2Q00578 YBL073WYBL073W 312 nt3.07□□□□□ -1.92
SSL2Q00578 IRC23YOR044W 474 nt3.07□□□□□ -1.92
SSL2Q00578 HEM4YOR278W 828 nt3.07□□□□□ -1.92
SSL2Q00578 YBR085C-AYBR085C-A 258 nt3.07□□□□□ -1.92
SSL2Q00578 TIM12YBR091C 330 nt3.07□□□□□ -1.92
SSL2Q00578 BOI1YBL085W 2943 nt3.07□□□□□ -1.92
SSL2Q00578 PAU10YDR542W 363 nt3.06□□□□□ -1.92
SSL2Q00578 YGL063C-AYGL063C-A 150 nt3.06□□□□□ -1.92
SSL2Q00578 PAU11YGL261C 363 nt3.06□□□□□ -1.92
SSL2Q00578 YHR078WYHR078W 1659 nt3.06□□□□□ -1.92
SSL2Q00578 YKL033W-AYKL033W-A 711 nt3.06□□□□□ -1.92
SSL2Q00578 RAX2YLR084C 3663 nt3.06□□□□□ -1.92
SSL2Q00578 YLR294CYLR294C 330 nt3.06□□□□□ -1.92
SSL2Q00578 PAU4YLR461W 363 nt3.06□□□□□ -1.92
SSL2Q00578 DSE4YNR067C 3354 nt3.06□□□□□ -1.92
SSL2Q00578 TRZ1YKR079C 2517 nt3.05□□□□□ -1.92
SSL2Q00578 APC11YDL008W 498 nt3.05□□□□□ -1.92
SSL2Q00578 RPL14BYHL001W 417 nt3.05□□□□□ -1.92
SSL2Q00578 YJL015CYJL015C 285 nt3.05□□□□□ -1.92
SSL2Q00578 NOT5YPR072W 1683 nt3.04□□□□□ -1.92
SSL2Q00578 PFF1YBR074W 2931 nt3.04□□□□□ -1.92
SSL2Q00578 KEL2YGR238C 2649 nt3.04□□□□□ -1.92
SSL2Q00578 PSY2YNL201C 2577 nt3.04□□□□□ -1.92
SSL2Q00578 snR80snR80 171 nt3.04□□□□□ -1.92
SSL2Q00578 TIF35YDR429C 825 nt3.04□□□□□ -1.92
SSL2Q00578 TIM8YJR135W-A 264 nt3.04□□□□□ -1.92
SSL2Q00578 YML037CYML037C 1023 nt3.04□□□□□ -1.92
SSL2Q00578 ISU1YPL135W 498 nt3.04□□□□□ -1.92
SSL2Q00578 YPL229WYPL229W 621 nt3.04□□□□□ -1.92
SSL2Q00578 TSA2YDR453C 591 nt3.03□□□□□ -1.92
SSL2Q00578 CYC7YEL039C 342 nt3.03□□□□□ -1.92
SSL2Q00578 tT(UGU)Q1tT(UGU)Q1 76 nt3.03□□□□□ -1.92
SSL2Q00578 YOL019W-AYOL019W-A 153 nt3.03□□□□□ -1.92
SSL2Q00578 YPR014CYPR014C 330 nt3.03□□□□□ -1.92
SSL2Q00578 FLO1YAR050W 4614 nt3.03□□□□□ -1.92
SSL2Q00578 YER023C-AYER023C-A 213 nt3.02□□□□□ -1.93
SSL2Q00578 ERP6YGL002W 651 nt3.02□□□□□ -1.93
SSL2Q00578 RPL9BYNL067W 576 nt3.02□□□□□ -1.93
SSL2Q00578 RSN1YMR266W 2862 nt3.02□□□□□ -1.93
SSL2Q00578 PUF6YDR496C 1971 nt3.01□□□□□ -1.93
SSL2Q00578 COX1Q0045 1605 nt3.01□□□□□ -1.93
SSL2Q00578 RPL26AYLR344W 384 nt3.01□□□□□ -1.93
SSL2Q00578 POM152YMR129W 4014 nt3.01□□□□□ -1.93
SSL2Q00578 FRE2YKL220C 2136 nt3.01□□□□□ -1.93
SSL2Q00578 YDR169C-AYDR169C-A 150 nt3□□□□□ -1.93
SSL2Q00578 YDR193WYDR193W 399 nt3□□□□□ -1.93
SSL2Q00578 PSY1YKL076C 384 nt3□□□□□ -1.93
SSL2Q00578 YNL198CYNL198C 303 nt3□□□□□ -1.93
SSL2Q00578 YPR099CYPR099C 357 nt3□□□□□ -1.93
SSL2Q00578 PCF11YDR228C 1881 nt3□□□□□ -1.93
SSL2Q00578 MOT1YPL082C 5604 nt3□□□□□ -1.93
SSL2Q00578 YPL216WYPL216W 3309 nt2.99□□□□□ -1.93
SSL2Q00578 RIF1YBR275C 5751 nt2.99□□□□□ -1.93
SSL2Q00578 CWC22YGR278W 1734 nt2.99□□□□□ -1.93
SSL2Q00578 BLI1YKL061W 342 nt2.99□□□□□ -1.93
SSL2Q00578 YKR033CYKR033C 426 nt2.99□□□□□ -1.93
SSL2Q00578 YLR012CYLR012C 300 nt2.99□□□□□ -1.93
SSL2Q00578 SRO77YBL106C 3033 nt2.99□□□□□ -1.93
SSL2Q00578 WIP1YDR374W-A 270 nt2.98□□□□□ -1.93
SSL2Q00578 COX7YMR256C 183 nt2.98□□□□□ -1.93
SSL2Q00578 ATP15YPL271W 189 nt2.98□□□□□ -1.93
SSL2Q00578 RGR1YLR071C 3249 nt2.98□□□□□ -1.93
SSL2Q00578 NAB3YPL190C 2409 nt2.98□□□□□ -1.93
SSL2Q00578 LYS9YNR050C 1341 nt2.97□□□□□ -1.93
SSL2Q00578 YGR265WYGR265W 411 nt2.97□□□□□ -1.93
SSL2Q00578 YHR086W-AYHR086W-A 162 nt2.97□□□□□ -1.93
SSL2Q00578 NCE101YJL205C 162 nt2.97□□□□□ -1.93
SSL2Q00578 RPL8BYLL045C 771 nt2.97□□□□□ -1.93
SSL2Q00578 TMA10YLR327C 261 nt2.97□□□□□ -1.93
SSL2Q00578 snR51snR51 107 nt2.97□□□□□ -1.93
SSL2Q00578 TPS2YDR074W 2691 nt2.97□□□□□ -1.93
SSL2Q00578 TRM2YKR056W 1920 nt2.97□□□□□ -1.93
SSL2Q00578 IRC10YOL015W 1761 nt2.97□□□□□ -1.93
SSL2Q00578 SAP1YER047C 2694 nt2.96□□□□□ -1.93
SSL2Q00578 YOL057WYOL057W 2136 nt2.96□□□□□ -1.93
SSL2Q00578 YPL150WYPL150W 2706 nt2.96□□□□□ -1.94
SSL2Q00578 YER079C-AYER079C-A 339 nt2.96□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms