Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 RPL37AYLR185W 267 nt2.49□□□□□ -2.01
SUB1P54000 TMA7YLR262C-A 195 nt2.49□□□□□ -2.01
SUB1P54000 YDL068WYDL068W 330 nt2.48□□□□□ -2.01
SUB1P54000 SEC31YDL195W 3822 nt2.48□□□□□ -2.01
SUB1P54000 TIM8YJR135W-A 264 nt2.48□□□□□ -2.01
SUB1P54000 YLR012CYLR012C 300 nt2.48□□□□□ -2.01
SUB1P54000 YLR252WYLR252W 306 nt2.48□□□□□ -2.01
SUB1P54000 YNL146C-AYNL146C-A 195 nt2.48□□□□□ -2.01
SUB1P54000 YPL039WYPL039W 951 nt2.48□□□□□ -2.01
SUB1P54000 YPR147CYPR147C 915 nt2.48□□□□□ -2.01
SUB1P54000 HCS1YKL017C 2052 nt2.48□□□□□ -2.01
SUB1P54000 NUP82YJL061W 2142 nt2.47□□□□□ -2.01
SUB1P54000 BNA7YDR428C 786 nt2.47□□□□□ -2.01
SUB1P54000 AYR1YIL124W 894 nt2.47□□□□□ -2.01
SUB1P54000 PUT3YKL015W 2940 nt2.46□□□□□ -2.02
SUB1P54000 STB4YMR019W 2850 nt2.46□□□□□ -2.02
SUB1P54000 YDL062WYDL062W 426 nt2.46□□□□□ -2.02
SUB1P54000 OCA6YDR067C 675 nt2.46□□□□□ -2.02
SUB1P54000 YDR194W-AYDR194W-A 153 nt2.46□□□□□ -2.02
SUB1P54000 YIL156W-BYIL156W-B 222 nt2.46□□□□□ -2.02
SUB1P54000 SNC2YOR327C 348 nt2.46□□□□□ -2.02
SUB1P54000 NAM7YMR080C 2916 nt2.46□□□□□ -2.02
SUB1P54000 RIC1YLR039C 3171 nt2.46□□□□□ -2.02
SUB1P54000 SGS1YMR190C 4344 nt2.46□□□□□ -2.02
SUB1P54000 CDC27YBL084C 2277 nt2.45□□□□□ -2.02
SUB1P54000 MCD1YDL003W 1701 nt2.45□□□□□ -2.02
SUB1P54000 TBS1YBR150C 3285 nt2.45□□□□□ -2.02
SUB1P54000 YEL018C-AYEL018C-A 534 nt2.45□□□□□ -2.02
SUB1P54000 NCE101YJL205C 162 nt2.45□□□□□ -2.02
SUB1P54000 YLR271WYLR271W 825 nt2.45□□□□□ -2.02
SUB1P54000 SWS2YNL081C 432 nt2.45□□□□□ -2.02
SUB1P54000 SOK2YMR016C 2358 nt2.45□□□□□ -2.02
SUB1P54000 YAL059C-AYAL059C-A 423 nt2.44□□□□□ -2.02
SUB1P54000 YOR283WYOR283W 693 nt2.44□□□□□ -2.02
SUB1P54000 DFG16YOR030W 1860 nt2.43□□□□□ -2.02
SUB1P54000 RPH1YER169W 2391 nt2.43□□□□□ -2.02
SUB1P54000 YCR064CYCR064C 411 nt2.43□□□□□ -2.02
SUB1P54000 SPO13YHR014W 876 nt2.43□□□□□ -2.02
SUB1P54000 YIL029CYIL029C 429 nt2.43□□□□□ -2.02
SUB1P54000 CYB5YNL111C 363 nt2.43□□□□□ -2.02
SUB1P54000 ARF3YOR094W 552 nt2.43□□□□□ -2.02
SUB1P54000 YPL238CYPL238C 390 nt2.43□□□□□ -2.02
SUB1P54000 AGC1YPR021C 2709 nt2.43□□□□□ -2.02
SUB1P54000 SEC16YPL085W 6588 nt2.43□□□□□ -2.02
SUB1P54000 NEO1YIL048W 3456 nt2.43□□□□□ -2.02
SUB1P54000 DNF1YER166W 4716 nt2.42□□□□□ -2.02
SUB1P54000 BRP1YGL007W 378 nt2.42□□□□□ -2.02
SUB1P54000 YHR032W-AYHR032W-A 180 nt2.42□□□□□ -2.02
SUB1P54000 YKL123WYKL123W 381 nt2.42□□□□□ -2.02
SUB1P54000 AFB1YLR040C 675 nt2.42□□□□□ -2.02
SUB1P54000 RTC6YPL183W-A 282 nt2.42□□□□□ -2.02
SUB1P54000 MSB1YOR188W 3414 nt2.42□□□□□ -2.02
SUB1P54000 PLC1YPL268W 2610 nt2.41□□□□□ -2.02
SUB1P54000 UTP13YLR222C 2454 nt2.41□□□□□ -2.02
SUB1P54000 SWT1YOR166C 1377 nt2.41□□□□□ -2.02
SUB1P54000 YDR042CYDR042C 603 nt2.41□□□□□ -2.02
SUB1P54000 SPC1YJR010C-A 285 nt2.41□□□□□ -2.02
SUB1P54000 HSK3YKL138C-A 210 nt2.41□□□□□ -2.02
SUB1P54000 YPL197CYPL197C 414 nt2.41□□□□□ -2.02
SUB1P54000 ARP7YPR034W 1434 nt2.41□□□□□ -2.02
SUB1P54000 ADR1YDR216W 3972 nt2.4□□□□□ -2.02
SUB1P54000 BTT1YDR252W 450 nt2.4□□□□□ -2.03
SUB1P54000 YGL069CYGL069C 465 nt2.4□□□□□ -2.03
SUB1P54000 COX13YGL191W 390 nt2.4□□□□□ -2.03
SUB1P54000 YHR071C-AYHR071C-A 321 nt2.4□□□□□ -2.03
SUB1P54000 YJR140W-AYJR140W-A 150 nt2.4□□□□□ -2.03
SUB1P54000 PGA1YNL158W 597 nt2.4□□□□□ -2.03
SUB1P54000 PET309YLR067C 2898 nt2.4□□□□□ -2.03
SUB1P54000 RPL27BYDR471W 411 nt2.39□□□□□ -2.03
SUB1P54000 COX14YML129C 213 nt2.39□□□□□ -2.03
SUB1P54000 YOR394C-AYOR394C-A 168 nt2.39□□□□□ -2.03
SUB1P54000 SCD5YOR329C 2619 nt2.38□□□□□ -2.03
SUB1P54000 SET2YJL168C 2202 nt2.38□□□□□ -2.03
SUB1P54000 YFL012W-AYFL012W-A 375 nt2.38□□□□□ -2.03
SUB1P54000 SEC22YLR268W 645 nt2.38□□□□□ -2.03
SUB1P54000 GMC2YLR445W 567 nt2.38□□□□□ -2.03
SUB1P54000 YMR324CYMR324C 243 nt2.38□□□□□ -2.03
SUB1P54000 TOR1YJR066W 7413 nt2.38□□□□□ -2.03
SUB1P54000 YJL016WYJL016W 1686 nt2.37□□□□□ -2.03
SUB1P54000 YNL144CYNL144C 2223 nt2.37□□□□□ -2.03
SUB1P54000 MUD2YKL074C 1584 nt2.37□□□□□ -2.03
SUB1P54000 YDR220CYDR220C 294 nt2.37□□□□□ -2.03
SUB1P54000 RPL36BYPL249C-A 303 nt2.37□□□□□ -2.03
SUB1P54000 GPX2YBR244W 489 nt2.37□□□□□ -2.03
SUB1P54000 TOR2YKL203C 7425 nt2.37□□□□□ -2.03
SUB1P54000 CHC1YGL206C 4962 nt2.36□□□□□ -2.03
SUB1P54000 RBL2YOR265W 321 nt2.36□□□□□ -2.03
SUB1P54000 VMR1YHL035C 4779 nt2.36□□□□□ -2.03
SUB1P54000 YJR039WYJR039W 3366 nt2.35□□□□□ -2.03
SUB1P54000 RNH70YGR276C 1662 nt2.35□□□□□ -2.03
SUB1P54000 YLR149CYLR149C 2193 nt2.35□□□□□ -2.03
SUB1P54000 tT(UGU)Q1tT(UGU)Q1 76 nt2.35□□□□□ -2.03
SUB1P54000 SEN15YMR059W 387 nt2.35□□□□□ -2.03
SUB1P54000 SPC29YPL124W 762 nt2.35□□□□□ -2.03
SUB1P54000 YOR343W-AYOR343W-A 1317 nt2.35□□□□□ -2.03
SUB1P54000 SLN1YIL147C 3663 nt2.35□□□□□ -2.03
SUB1P54000 YLR035C-AYLR035C-A 3468 nt2.34□□□□□ -2.03
SUB1P54000 YGR018CYGR018C 330 nt2.34□□□□□ -2.03
SUB1P54000 YHR073W-AYHR073W-A 177 nt2.34□□□□□ -2.03
SUB1P54000 UBP2YOR124C 3819 nt2.34□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 23.6 ms