Protein–RNA interactions for Protein: P53179

RIM8, pH-response regulator protein palF/RIM8, yeastyeast

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM8P53179 VPS55YJR044C 423 nt3.28□□□□□ -1.88
RIM8P53179 RPL23AYBL087C 414 nt3.28□□□□□ -1.88
RIM8P53179 AKR1YDR264C 2295 nt3.28□□□□□ -1.88
RIM8P53179 ATG26YLR189C 3597 nt3.27□□□□□ -1.89
RIM8P53179 NMD2YHR077C 3270 nt3.27□□□□□ -1.89
RIM8P53179 MRP10YDL045W-A 288 nt3.27□□□□□ -1.89
RIM8P53179 YER189WYER189W 369 nt3.27□□□□□ -1.89
RIM8P53179 OLI1Q0130 231 nt3.27□□□□□ -1.89
RIM8P53179 YKL156C-AYKL156C-A 117 nt3.27□□□□□ -1.89
RIM8P53179 YLR053CYLR053C 327 nt3.27□□□□□ -1.89
RIM8P53179 LRG1YDL240W 3054 nt3.27□□□□□ -1.89
RIM8P53179 ARG2YJL071W 1725 nt3.27□□□□□ -1.89
RIM8P53179 STU1YBL034C 4542 nt3.27□□□□□ -1.89
RIM8P53179 SLP1YOR154W 1764 nt3.26□□□□□ -1.89
RIM8P53179 snR60snR60 104 nt3.26□□□□□ -1.89
RIM8P53179 TSA2YDR453C 591 nt3.26□□□□□ -1.89
RIM8P53179 NCE101YJL205C 162 nt3.26□□□□□ -1.89
RIM8P53179 CHO2YGR157W 2610 nt3.26□□□□□ -1.89
RIM8P53179 FRE8YLR047C 2061 nt3.26□□□□□ -1.89
RIM8P53179 SEG1YMR086W 2883 nt3.26□□□□□ -1.89
RIM8P53179 AIM9YER080W 1884 nt3.25□□□□□ -1.89
RIM8P53179 CCT7YJL111W 1653 nt3.25□□□□□ -1.89
RIM8P53179 HPA3YEL066W 540 nt3.25□□□□□ -1.89
RIM8P53179 VTC1YER072W 390 nt3.25□□□□□ -1.89
RIM8P53179 tK(UUU)DtK(UUU)D 73 nt3.25□□□□□ -1.89
RIM8P53179 tK(UUU)G1tK(UUU)G1 73 nt3.25□□□□□ -1.89
RIM8P53179 tK(UUU)G2tK(UUU)G2 73 nt3.25□□□□□ -1.89
RIM8P53179 tK(UUU)KtK(UUU)K 73 nt3.25□□□□□ -1.89
RIM8P53179 tK(UUU)LtK(UUU)L 73 nt3.25□□□□□ -1.89
RIM8P53179 tK(UUU)OtK(UUU)O 73 nt3.25□□□□□ -1.89
RIM8P53179 tK(UUU)PtK(UUU)P 73 nt3.25□□□□□ -1.89
RIM8P53179 LSM1YJL124C 519 nt3.25□□□□□ -1.89
RIM8P53179 YAL064W-BYAL064W-B 381 nt3.25□□□□□ -1.89
RIM8P53179 GSC2YGR032W 5688 nt3.25□□□□□ -1.89
RIM8P53179 JJJ2YJL162C 1752 nt3.25□□□□□ -1.89
RIM8P53179 CPA2YJR109C 3357 nt3.25□□□□□ -1.89
RIM8P53179 YDR089WYDR089W 2610 nt3.24□□□□□ -1.89
RIM8P53179 TRZ1YKR079C 2517 nt3.24□□□□□ -1.89
RIM8P53179 MDM1YML104C 3384 nt3.24□□□□□ -1.89
RIM8P53179 ISU1YPL135W 498 nt3.24□□□□□ -1.89
RIM8P53179 PHO2YDL106C 1680 nt3.24□□□□□ -1.89
RIM8P53179 MNT3YIL014W 1893 nt3.23□□□□□ -1.89
RIM8P53179 CCW14YLR390W-A 717 nt3.23□□□□□ -1.89
RIM8P53179 YOR329W-AYOR329W-A 210 nt3.23□□□□□ -1.89
RIM8P53179 YPL182CYPL182C 384 nt3.23□□□□□ -1.89
RIM8P53179 AI5_ALPHAQ0070 1893 nt3.22□□□□□ -1.89
RIM8P53179 SPT16YGL207W 3108 nt3.22□□□□□ -1.89
RIM8P53179 ATP25YMR098C 1839 nt3.22□□□□□ -1.89
RIM8P53179 YDL041WYDL041W 354 nt3.22□□□□□ -1.89
RIM8P53179 YLR154W-EYLR154W-E 204 nt3.22□□□□□ -1.89
RIM8P53179 UBP5YER144C 2418 nt3.22□□□□□ -1.89
RIM8P53179 MPS1YDL028C 2295 nt3.22□□□□□ -1.89
RIM8P53179 SEA4YBL104C 3117 nt3.22□□□□□ -1.89
RIM8P53179 SSY1YDR160W 2559 nt3.21□□□□□ -1.9
RIM8P53179 ERB1YMR049C 2424 nt3.21□□□□□ -1.9
RIM8P53179 FLO5YHR211W 3228 nt3.21□□□□□ -1.9
RIM8P53179 YHL041WYHL041W 450 nt3.21□□□□□ -1.9
RIM8P53179 YMR321CYMR321C 318 nt3.21□□□□□ -1.9
RIM8P53179 HHF1YBR009C 312 nt3.21□□□□□ -1.9
RIM8P53179 SAR1YPL218W 573 nt3.21□□□□□ -1.9
RIM8P53179 ORC2YBR060C 1863 nt3.21□□□□□ -1.9
RIM8P53179 FLO10YKR102W 3510 nt3.2□□□□□ -1.9
RIM8P53179 GCD6YDR211W 2139 nt3.2□□□□□ -1.9
RIM8P53179 NUP82YJL061W 2142 nt3.2□□□□□ -1.9
RIM8P53179 SRL3YKR091W 741 nt3.2□□□□□ -1.9
RIM8P53179 RPL36AYMR194W 303 nt3.2□□□□□ -1.9
RIM8P53179 YOR015WYOR015W 360 nt3.2□□□□□ -1.9
RIM8P53179 YGR237CYGR237C 2358 nt3.2□□□□□ -1.9
RIM8P53179 TAF6YGL112C 1551 nt3.2□□□□□ -1.9
RIM8P53179 LRE1YCL051W 1752 nt3.2□□□□□ -1.9
RIM8P53179 YHR080CYHR080C 4038 nt3.2□□□□□ -1.9
RIM8P53179 CDC24YAL041W 2565 nt3.19□□□□□ -1.9
RIM8P53179 CWC22YGR278W 1734 nt3.19□□□□□ -1.9
RIM8P53179 YGL217CYGL217C 342 nt3.19□□□□□ -1.9
RIM8P53179 TIM13YGR181W 318 nt3.19□□□□□ -1.9
RIM8P53179 PCC1YKR095W-A 267 nt3.19□□□□□ -1.9
RIM8P53179 YPR063CYPR063C 423 nt3.19□□□□□ -1.9
RIM8P53179 YBR224WYBR224W 516 nt3.19□□□□□ -1.9
RIM8P53179 RAD4YER162C 2265 nt3.19□□□□□ -1.9
RIM8P53179 MSS11YMR164C 2277 nt3.19□□□□□ -1.9
RIM8P53179 NTO1YPR031W 2247 nt3.19□□□□□ -1.9
RIM8P53179 PDC2YDR081C 2778 nt3.18□□□□□ -1.9
RIM8P53179 EPL1YFL024C 2499 nt3.18□□□□□ -1.9
RIM8P53179 YGR027W-BYGR027W-B 5268 nt3.18□□□□□ -1.9
RIM8P53179 YLR227W-BYLR227W-B 5268 nt3.18□□□□□ -1.9
RIM8P53179 YPR158C-DYPR158C-D 5268 nt3.18□□□□□ -1.9
RIM8P53179 FAA2YER015W 2235 nt3.18□□□□□ -1.9
RIM8P53179 CUL3YGR003W 2235 nt3.18□□□□□ -1.9
RIM8P53179 COX23YHR116W 456 nt3.18□□□□□ -1.9
RIM8P53179 PDS5YMR076C 3834 nt3.18□□□□□ -1.9
RIM8P53179 YBL053WYBL053W 375 nt3.18□□□□□ -1.9
RIM8P53179 CDH1YGL003C 1701 nt3.18□□□□□ -1.9
RIM8P53179 MYO3YKL129C 3819 nt3.18□□□□□ -1.9
RIM8P53179 RPN1YHR027C 2982 nt3.18□□□□□ -1.9
RIM8P53179 snR79snR79 84 nt3.17□□□□□ -1.9
RIM8P53179 AIM11YER093C-A 414 nt3.17□□□□□ -1.9
RIM8P53179 YLR120W-AYLR120W-A 102 nt3.17□□□□□ -1.9
RIM8P53179 RPS18BYML026C 441 nt3.17□□□□□ -1.9
RIM8P53179 RPL20BYOR312C 519 nt3.17□□□□□ -1.9
RIM8P53179 YPR146CYPR146C 330 nt3.17□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 55.2 ms