Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	RPL26A	YLR344W	384 nt		2.94	□□□□□ -1.94
CAF16	P43569	FPR1	YNL135C	345 nt		2.94	□□□□□ -1.94
CAF16	P43569	YSP2	YDR326C	4317 nt		2.94	□□□□□ -1.94
CAF16	P43569	RRM3	YHR031C	2172 nt		2.94	□□□□□ -1.94
CAF16	P43569	YCR022C	YCR022C	345 nt		2.93	□□□□□ -1.94
CAF16	P43569	ISF1	YMR081C	1017 nt		2.93	□□□□□ -1.94
CAF16	P43569	YBL073W	YBL073W	312 nt		2.93	□□□□□ -1.94
CAF16	P43569	REV1	YOR346W	2958 nt		2.93	□□□□□ -1.94
CAF16	P43569	YTA7	YGR270W	4140 nt		2.93	□□□□□ -1.94
CAF16	P43569	GIN4	YDR507C	3429 nt		2.92	□□□□□ -1.94
CAF16	P43569	STT4	YLR305C	5703 nt		2.92	□□□□□ -1.94
CAF16	P43569	BMH2	YDR099W	822 nt		2.92	□□□□□ -1.94
CAF16	P43569	WIP1	YDR374W-A	270 nt		2.92	□□□□□ -1.94
CAF16	P43569	SDC1	YDR469W	528 nt		2.92	□□□□□ -1.94
CAF16	P43569	YFL032W	YFL032W	321 nt		2.92	□□□□□ -1.94
CAF16	P43569	PHD1	YKL043W	1101 nt		2.92	□□□□□ -1.94
CAF16	P43569	YPL182C	YPL182C	384 nt		2.92	□□□□□ -1.94
CAF16	P43569	FIR1	YER032W	2631 nt		2.92	□□□□□ -1.94
CAF16	P43569	ECM21	YBL101C	3354 nt		2.92	□□□□□ -1.94
CAF16	P43569	IPT1	YDR072C	1584 nt		2.91	□□□□□ -1.94
CAF16	P43569	snR65	snR65	100 nt		2.91	□□□□□ -1.94
CAF16	P43569	YDL025W-A	YDL025W-A	105 nt		2.91	□□□□□ -1.94
CAF16	P43569	DAD4	YDR320C-A	219 nt		2.91	□□□□□ -1.94
CAF16	P43569	DYN2	YDR424C	279 nt		2.91	□□□□□ -1.94
CAF16	P43569	TMA19	YKL056C	504 nt		2.91	□□□□□ -1.94
CAF16	P43569	snR36	snR36	182 nt		2.91	□□□□□ -1.94
CAF16	P43569	COP1	YDL145C	3606 nt		2.91	□□□□□ -1.94
CAF16	P43569	KAR3	YPR141C	2190 nt		2.91	□□□□□ -1.94
CAF16	P43569	RRP12	YPL012W	3687 nt		2.91	□□□□□ -1.94
CAF16	P43569	MET6	YER091C	2304 nt		2.91	□□□□□ -1.94
CAF16	P43569	PTC5	YOR090C	1719 nt		2.9	□□□□□ -1.94
CAF16	P43569	NCL1	YBL024W	2055 nt		2.9	□□□□□ -1.95
CAF16	P43569	IES6	YEL044W	501 nt		2.9	□□□□□ -1.95
CAF16	P43569	RPL36A	YMR194W	303 nt		2.9	□□□□□ -1.95
CAF16	P43569	LSM7	YNL147W	348 nt		2.9	□□□□□ -1.95
CAF16	P43569	YOR050C	YOR050C	348 nt		2.9	□□□□□ -1.95
CAF16	P43569	DRS2	YAL026C	4068 nt		2.9	□□□□□ -1.95
CAF16	P43569	MPH1	YIR002C	2982 nt		2.9	□□□□□ -1.95
CAF16	P43569	UBP11	YKR098C	2154 nt		2.9	□□□□□ -1.95
CAF16	P43569	RLI1	YDR091C	1827 nt		2.89	□□□□□ -1.95
CAF16	P43569	PRP6	YBR055C	2700 nt		2.89	□□□□□ -1.95
CAF16	P43569	KAP104	YBR017C	2757 nt		2.89	□□□□□ -1.95
CAF16	P43569	RPS24A	YER074W	408 nt		2.88	□□□□□ -1.95
CAF16	P43569	RPL39	YJL189W	156 nt		2.88	□□□□□ -1.95
CAF16	P43569	YKL083W	YKL083W	615 nt		2.88	□□□□□ -1.95
CAF16	P43569	YKR033C	YKR033C	426 nt		2.88	□□□□□ -1.95
CAF16	P43569	RTC6	YPL183W-A	282 nt		2.88	□□□□□ -1.95
CAF16	P43569	YPL229W	YPL229W	621 nt		2.88	□□□□□ -1.95
CAF16	P43569	YBR121C-A	YBR121C-A	159 nt		2.88	□□□□□ -1.95
CAF16	P43569	MMS1	YPR164W	4224 nt		2.88	□□□□□ -1.95
CAF16	P43569	YBP1	YBR216C	2025 nt		2.88	□□□□□ -1.95
CAF16	P43569	RIF1	YBR275C	5751 nt		2.87	□□□□□ -1.95
CAF16	P43569	YJL070C	YJL070C	2667 nt		2.87	□□□□□ -1.95
CAF16	P43569	TAO3	YIL129C	7131 nt		2.87	□□□□□ -1.95
CAF16	P43569	CDC20	YGL116W	1833 nt		2.87	□□□□□ -1.95
CAF16	P43569	YJL222W-B	YJL222W-B	138 nt		2.87	□□□□□ -1.95
CAF16	P43569	SHE2	YKL130C	741 nt		2.87	□□□□□ -1.95
CAF16	P43569	GRX8	YLR364W	330 nt		2.87	□□□□□ -1.95
CAF16	P43569	SAK1	YER129W	3429 nt		2.87	□□□□□ -1.95
CAF16	P43569	SIN3	YOL004W	4611 nt		2.86	□□□□□ -1.95
CAF16	P43569	YGL024W	YGL024W	336 nt		2.86	□□□□□ -1.95
CAF16	P43569	YGL239C	YGL239C	315 nt		2.86	□□□□□ -1.95
CAF16	P43569	YGR174W-A	YGR174W-A	87 nt		2.86	□□□□□ -1.95
CAF16	P43569	YIL066W-A	YIL066W-A	444 nt		2.86	□□□□□ -1.95
CAF16	P43569	YJL020W-A	YJL020W-A	258 nt		2.86	□□□□□ -1.95
CAF16	P43569	PSY1	YKL076C	384 nt		2.86	□□□□□ -1.95
CAF16	P43569	CRS5	YOR031W	210 nt		2.86	□□□□□ -1.95
CAF16	P43569	CIN8	YEL061C	3003 nt		2.86	□□□□□ -1.95
CAF16	P43569	AIM9	YER080W	1884 nt		2.86	□□□□□ -1.95
CAF16	P43569	SDC25	YLL016W	3147 nt		2.85	□□□□□ -1.95
CAF16	P43569	IKI3	YLR384C	4050 nt		2.85	□□□□□ -1.95
CAF16	P43569	GCD6	YDR211W	2139 nt		2.85	□□□□□ -1.95
CAF16	P43569	QCR7	YDR529C	384 nt		2.85	□□□□□ -1.95
CAF16	P43569	YAL042C-A	YAL042C-A	378 nt		2.85	□□□□□ -1.95
CAF16	P43569	COX19	YLL018C-A	297 nt		2.85	□□□□□ -1.95
CAF16	P43569	YOR282W	YOR282W	321 nt		2.85	□□□□□ -1.95
CAF16	P43569	YBT1	YLL048C	4986 nt		2.85	□□□□□ -1.95
CAF16	P43569	STE5	YDR103W	2754 nt		2.85	□□□□□ -1.95
CAF16	P43569	PRK1	YIL095W	2433 nt		2.84	□□□□□ -1.95
CAF16	P43569	HRD3	YLR207W	2502 nt		2.84	□□□□□ -1.95
CAF16	P43569	YHR080C	YHR080C	4038 nt		2.84	□□□□□ -1.95
CAF16	P43569	UBP14	YBR058C	2346 nt		2.84	□□□□□ -1.95
CAF16	P43569	FMP16	YDR070C	282 nt		2.84	□□□□□ -1.95
CAF16	P43569	TIM13	YGR181W	318 nt		2.84	□□□□□ -1.95
CAF16	P43569	RPL14B	YHL001W	417 nt		2.84	□□□□□ -1.95
CAF16	P43569	YAR029W	YAR029W	225 nt		2.84	□□□□□ -1.95
CAF16	P43569	SSN2	YDR443C	4263 nt		2.84	□□□□□ -1.95
CAF16	P43569	SNU114	YKL173W	3027 nt		2.84	□□□□□ -1.96
CAF16	P43569	RAD2	YGR258C	3096 nt		2.84	□□□□□ -1.96
CAF16	P43569	YDR133C	YDR133C	336 nt		2.83	□□□□□ -1.96
CAF16	P43569	HSK3	YKL138C-A	210 nt		2.83	□□□□□ -1.96
CAF16	P43569	HCH1	YNL281W	462 nt		2.83	□□□□□ -1.96
CAF16	P43569	FLO5	YHR211W	3228 nt		2.83	□□□□□ -1.96
CAF16	P43569	SGD1	YLR336C	2700 nt		2.83	□□□□□ -1.96
CAF16	P43569	FUN30	YAL019W	3396 nt		2.83	□□□□□ -1.96
CAF16	P43569	YDR183C-A	YDR183C-A	258 nt		2.82	□□□□□ -1.96
CAF16	P43569	FRE2	YKL220C	2136 nt		2.82	□□□□□ -1.96
CAF16	P43569	RKM1	YPL208W	1752 nt		2.82	□□□□□ -1.96
CAF16	P43569	SNQ2	YDR011W	4506 nt		2.81	□□□□□ -1.96
CAF16	P43569	ESL1	YIL151C	3357 nt		2.81	□□□□□ -1.96

Retrieved 100 of 7,029 protein–RNA pairs in 36 ms