Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 STE6YKL209C 3873 nt3.59□□□□□ -1.84
VPS35P34110 AUS1YOR011W 4185 nt3.59□□□□□ -1.84
VPS35P34110 SPB1YCL054W 2526 nt3.59□□□□□ -1.84
VPS35P34110 SQS1YNL224C 2304 nt3.58□□□□□ -1.84
VPS35P34110 PSF1YDR013W 627 nt3.58□□□□□ -1.84
VPS35P34110 YGL149WYGL149W 306 nt3.58□□□□□ -1.84
VPS35P34110 YLR458WYLR458W 381 nt3.58□□□□□ -1.84
VPS35P34110 DOA4YDR069C 2781 nt3.58□□□□□ -1.84
VPS35P34110 RPA135YPR010C 3612 nt3.58□□□□□ -1.84
VPS35P34110 APC2YLR127C 2562 nt3.57□□□□□ -1.84
VPS35P34110 YER039C-AYER039C-A 219 nt3.57□□□□□ -1.84
VPS35P34110 PFK26YIL107C 2484 nt3.57□□□□□ -1.84
VPS35P34110 YJL020W-AYJL020W-A 258 nt3.57□□□□□ -1.84
VPS35P34110 YKR033CYKR033C 426 nt3.57□□□□□ -1.84
VPS35P34110 CCW14YLR390W-A 717 nt3.57□□□□□ -1.84
VPS35P34110 YOR072W-AYOR072W-A 249 nt3.57□□□□□ -1.84
VPS35P34110 POM152YMR129W 4014 nt3.57□□□□□ -1.84
VPS35P34110 SGO1YOR073W 1773 nt3.56□□□□□ -1.84
VPS35P34110 JIP5YPR169W 1479 nt3.56□□□□□ -1.84
VPS35P34110 TLC1TLC1 1301 nt3.56□□□□□ -1.84
VPS35P34110 OSH6YKR003W 1347 nt3.56□□□□□ -1.84
VPS35P34110 RPL35AYDL191W 363 nt3.56□□□□□ -1.84
VPS35P34110 TIM11YDR322C-A 291 nt3.56□□□□□ -1.84
VPS35P34110 TRM7YBR061C 933 nt3.56□□□□□ -1.84
VPS35P34110 YPR146CYPR146C 330 nt3.56□□□□□ -1.84
VPS35P34110 EPL1YFL024C 2499 nt3.56□□□□□ -1.84
VPS35P34110 VTC4YJL012C 2166 nt3.56□□□□□ -1.84
VPS35P34110 AIM9YER080W 1884 nt3.56□□□□□ -1.84
VPS35P34110 VPS64YDR200C 1815 nt3.56□□□□□ -1.84
VPS35P34110 YAK1YJL141C 2424 nt3.55□□□□□ -1.84
VPS35P34110 REC8YPR007C 2043 nt3.55□□□□□ -1.84
VPS35P34110 LYS9YNR050C 1341 nt3.55□□□□□ -1.84
VPS35P34110 YER121WYER121W 345 nt3.55□□□□□ -1.84
VPS35P34110 BLI1YKL061W 342 nt3.55□□□□□ -1.84
VPS35P34110 HSK3YKL138C-A 210 nt3.55□□□□□ -1.84
VPS35P34110 YAL064W-BYAL064W-B 381 nt3.55□□□□□ -1.84
VPS35P34110 RPL8BYLL045C 771 nt3.55□□□□□ -1.84
VPS35P34110 HCH1YNL281W 462 nt3.55□□□□□ -1.84
VPS35P34110 STT4YLR305C 5703 nt3.55□□□□□ -1.84
VPS35P34110 MET5YJR137C 4329 nt3.55□□□□□ -1.84
VPS35P34110 NTO1YPR031W 2247 nt3.55□□□□□ -1.84
VPS35P34110 YDL242WYDL242W 354 nt3.54□□□□□ -1.84
VPS35P34110 YDR193WYDR193W 399 nt3.54□□□□□ -1.84
VPS35P34110 YGL188C-AYGL188C-A 141 nt3.54□□□□□ -1.84
VPS35P34110 AYR1YIL124W 894 nt3.54□□□□□ -1.84
VPS35P34110 RPL40AYIL148W 387 nt3.54□□□□□ -1.84
VPS35P34110 GIS2YNL255C 462 nt3.54□□□□□ -1.84
VPS35P34110 YPR099CYPR099C 357 nt3.54□□□□□ -1.84
VPS35P34110 PSO2YMR137C 1986 nt3.54□□□□□ -1.84
VPS35P34110 STU2YLR045C 2667 nt3.54□□□□□ -1.84
VPS35P34110 YOL057WYOL057W 2136 nt3.53□□□□□ -1.84
VPS35P34110 TCP1YDR212W 1680 nt3.53□□□□□ -1.84
VPS35P34110 snR80snR80 171 nt3.53□□□□□ -1.84
VPS35P34110 FAP7YDL166C 594 nt3.53□□□□□ -1.84
VPS35P34110 CSN9YDR179C 489 nt3.53□□□□□ -1.84
VPS35P34110 YIL066W-AYIL066W-A 444 nt3.53□□□□□ -1.84
VPS35P34110 RAM2YKL019W 951 nt3.53□□□□□ -1.84
VPS35P34110 RPS21AYKR057W 264 nt3.53□□□□□ -1.84
VPS35P34110 NPR3YHL023C 3441 nt3.53□□□□□ -1.85
VPS35P34110 YMR324CYMR324C 243 nt3.52□□□□□ -1.85
VPS35P34110 RIX1YHR197W 2292 nt3.52□□□□□ -1.85
VPS35P34110 YAT2YER024W 2772 nt3.52□□□□□ -1.85
VPS35P34110 MIT1YEL007W 2001 nt3.51□□□□□ -1.85
VPS35P34110 STE23YLR389C 3084 nt3.51□□□□□ -1.85
VPS35P34110 YER079C-AYER079C-A 339 nt3.51□□□□□ -1.85
VPS35P34110 YER189WYER189W 369 nt3.51□□□□□ -1.85
VPS35P34110 RPL25YOL127W 429 nt3.51□□□□□ -1.85
VPS35P34110 YEL025CYEL025C 3567 nt3.51□□□□□ -1.85
VPS35P34110 TAF2YCR042C 4224 nt3.51□□□□□ -1.85
VPS35P34110 TRM2YKR056W 1920 nt3.5□□□□□ -1.85
VPS35P34110 ASG1YIL130W 2895 nt3.5□□□□□ -1.85
VPS35P34110 ITC1YGL133W 3795 nt3.5□□□□□ -1.85
VPS35P34110 HTL1YCR020W-B 237 nt3.5□□□□□ -1.85
VPS35P34110 USE1YGL098W 738 nt3.5□□□□□ -1.85
VPS35P34110 YGL239CYGL239C 315 nt3.5□□□□□ -1.85
VPS35P34110 TIM13YGR181W 318 nt3.5□□□□□ -1.85
VPS35P34110 GOT1YMR292W 417 nt3.5□□□□□ -1.85
VPS35P34110 RPL32YBL092W 393 nt3.5□□□□□ -1.85
VPS35P34110 snR42snR42 351 nt3.5□□□□□ -1.85
VPS35P34110 PUF4YGL014W 2667 nt3.49□□□□□ -1.85
VPS35P34110 PSK2YOL045W 3306 nt3.49□□□□□ -1.85
VPS35P34110 RPN1YHR027C 2982 nt3.49□□□□□ -1.85
VPS35P34110 GCN1YGL195W 8019 nt3.49□□□□□ -1.85
VPS35P34110 YGR069WYGR069W 336 nt3.49□□□□□ -1.85
VPS35P34110 YMR046W-AYMR046W-A 129 nt3.49□□□□□ -1.85
VPS35P34110 POL3YDL102W 3294 nt3.49□□□□□ -1.85
VPS35P34110 SOK1YDR006C 2706 nt3.48□□□□□ -1.85
VPS35P34110 YMR317WYMR317W 3423 nt3.48□□□□□ -1.85
VPS35P34110 YDR344CYDR344C 444 nt3.48□□□□□ -1.85
VPS35P34110 YBR121C-AYBR121C-A 159 nt3.48□□□□□ -1.85
VPS35P34110 PAC1YOR269W 1485 nt3.47□□□□□ -1.85
VPS35P34110 YGL007C-AYGL007C-A 87 nt3.47□□□□□ -1.85
VPS35P34110 LSO2YGR169C-A 279 nt3.47□□□□□ -1.85
VPS35P34110 PUF6YDR496C 1971 nt3.47□□□□□ -1.85
VPS35P34110 ENA5YDR038C 3276 nt3.46□□□□□ -1.85
VPS35P34110 ENA2YDR039C 3276 nt3.46□□□□□ -1.85
VPS35P34110 ENA1YDR040C 3276 nt3.46□□□□□ -1.85
VPS35P34110 YDL211CYDL211C 1119 nt3.46□□□□□ -1.86
VPS35P34110 tC(GCA)BtC(GCA)B 72 nt3.46□□□□□ -1.86
VPS35P34110 tC(GCA)GtC(GCA)G 72 nt3.46□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 50.8 ms